Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 MIR513B-201ENST00000385136 84 ntBASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 MTCO2P3-201ENST00000442543 421 ntBASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 AC024909.2-201ENST00000553035 286 ntBASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 AC068137.4-201ENST00000638485 296 ntBASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 AC119751.4-201ENST00000507498 357 ntBASIC-3.91□□□□□ -3.03
VPS13AQ96RL7 RNU6-885P-201ENST00000516607 104 ntBASIC-3.91□□□□□ -3.03
VPS13AQ96RL7 RNU6-807P-201ENST00000516805 107 ntBASIC-3.91□□□□□ -3.03
VPS13AQ96RL7 U2.18-201ENST00000622185 84 ntBASIC-3.91□□□□□ -3.03
VPS13AQ96RL7 Y_RNA.351-201ENST00000365436 96 ntBASIC-3.91□□□□□ -3.04
VPS13AQ96RL7 SNORD72-201ENST00000390994 80 ntBASIC-3.91□□□□□ -3.04
VPS13AQ96RL7 MIR451A-201ENST00000385059 72 ntBASIC-3.92□□□□□ -3.04
VPS13AQ96RL7 RPL39P6-201ENST00000448289 150 ntBASIC-3.92□□□□□ -3.04
VPS13AQ96RL7 SNORD36A-201ENST00000362874 73 ntBASIC-3.92□□□□□ -3.04
VPS13AQ96RL7 RNU6-649P-201ENST00000384463 107 ntBASIC-3.92□□□□□ -3.04
VPS13AQ96RL7 RNU7-137P-201ENST00000516788 62 ntBASIC-3.92□□□□□ -3.04
VPS13AQ96RL7 AC091946.2-201ENST00000606105 291 ntBASIC-3.92□□□□□ -3.04
VPS13AQ96RL7 RNU6-318P-201ENST00000384283 103 ntBASIC-3.92□□□□□ -3.04
VPS13AQ96RL7 RNA5SP494-201ENST00000410653 129 ntBASIC-3.92□□□□□ -3.04
VPS13AQ96RL7 RNY3P8-201ENST00000411366 126 ntBASIC-3.92□□□□□ -3.04
VPS13AQ96RL7 RNU7-48P-201ENST00000458875 63 ntBASIC-3.93□□□□□ -3.04
VPS13AQ96RL7 RNU6-660P-201ENST00000364566 109 ntBASIC-3.93□□□□□ -3.04
VPS13AQ96RL7 RNU6-108P-201ENST00000365558 107 ntBASIC-3.93□□□□□ -3.04
VPS13AQ96RL7 ADI1P3-201ENST00000549509 470 ntBASIC-3.94□□□□□ -3.04
VPS13AQ96RL7 RNU6-543P-201ENST00000362576 108 ntBASIC-3.94□□□□□ -3.04
VPS13AQ96RL7 RNU6-1270P-201ENST00000517128 108 ntBASIC-3.94□□□□□ -3.04
VPS13AQ96RL7 AC009961.2-201ENST00000435771 251 ntBASIC-3.94□□□□□ -3.04
VPS13AQ96RL7 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.95□□□□□ -3.04
VPS13AQ96RL7 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.95□□□□□ -3.04
VPS13AQ96RL7 RNU6-693P-201ENST00000516134 107 ntBASIC-3.95□□□□□ -3.04
VPS13AQ96RL7 MIR548A1-201ENST00000385041 97 ntBASIC-3.96□□□□□ -3.04
VPS13AQ96RL7 MIR4637-201ENST00000582405 84 ntBASIC-3.96□□□□□ -3.04
VPS13AQ96RL7 MIR4293-201ENST00000584305 78 ntBASIC-3.96□□□□□ -3.04
VPS13AQ96RL7 MIR548AA1-201ENST00000384971 97 ntBASIC-3.96□□□□□ -3.04
VPS13AQ96RL7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-3.96□□□□□ -3.04
VPS13AQ96RL7 RNU6-523P-201ENST00000516304 54 ntBASIC-3.96□□□□□ -3.04
VPS13AQ96RL7 MIR429-201ENST00000362106 83 ntBASIC-3.96□□□□□ -3.04
VPS13AQ96RL7 AC138393.2-201ENST00000414742 246 ntBASIC-3.96□□□□□ -3.04
VPS13AQ96RL7 AP002782.1-201ENST00000623107 614 ntBASIC-3.96□□□□□ -3.04
VPS13AQ96RL7 RNU6-167P-201ENST00000384292 106 ntBASIC-3.97□□□□□ -3.04
VPS13AQ96RL7 Y_RNA.541-201ENST00000384640 113 ntBASIC-3.97□□□□□ -3.04
VPS13AQ96RL7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-3.97□□□□□ -3.04
VPS13AQ96RL7 Y_RNA.144-201ENST00000363521 113 ntBASIC-3.97□□□□□ -3.05
VPS13AQ96RL7 RNU5F-3P-201ENST00000363767 117 ntBASIC-3.97□□□□□ -3.05
VPS13AQ96RL7 MIR122-201ENST00000385044 85 ntBASIC-3.97□□□□□ -3.05
VPS13AQ96RL7 RNU6-77P-201ENST00000410554 91 ntBASIC-3.97□□□□□ -3.05
VPS13AQ96RL7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-3.97□□□□□ -3.05
VPS13AQ96RL7 Y_RNA.242-201ENST00000364473 110 ntBASIC-3.98□□□□□ -3.05
VPS13AQ96RL7 RNU6-619P-201ENST00000365146 108 ntBASIC-3.98□□□□□ -3.05
VPS13AQ96RL7 Y_RNA.127-201ENST00000363386 109 ntBASIC-3.99□□□□□ -3.05
VPS13AQ96RL7 SNORD115-38-201ENST00000365037 82 ntBASIC-3.99□□□□□ -3.05
VPS13AQ96RL7 AC026741.1-201ENST00000605892 482 ntBASIC-3.99□□□□□ -3.05
VPS13AQ96RL7 SNORD116-23-201ENST00000384645 92 ntBASIC-3.99□□□□□ -3.05
VPS13AQ96RL7 SNORD67.1-201ENST00000516618 108 ntBASIC-3.99□□□□□ -3.05
VPS13AQ96RL7 RNU6-1169P-201ENST00000363537 103 ntBASIC-4□□□□□ -3.05
VPS13AQ96RL7 RNU6-669P-201ENST00000365575 107 ntBASIC-4□□□□□ -3.05
VPS13AQ96RL7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-4□□□□□ -3.05
VPS13AQ96RL7 MIR6509-201ENST00000614603 85 ntBASIC-4□□□□□ -3.05
VPS13AQ96RL7 RNA5SP144-201ENST00000410846 116 ntBASIC-4□□□□□ -3.05
VPS13AQ96RL7 USP9YP23-201ENST00000455085 407 ntBASIC-4□□□□□ -3.05
VPS13AQ96RL7 RNU6-150P-201ENST00000516237 95 ntBASIC-4□□□□□ -3.05
VPS13AQ96RL7 RNU6-1198P-201ENST00000516904 67 ntBASIC-4□□□□□ -3.05
VPS13AQ96RL7 RNU6-598P-201ENST00000364017 105 ntBASIC-4□□□□□ -3.05
VPS13AQ96RL7 RPS29P25-201ENST00000481709 171 ntBASIC-4.01□□□□□ -3.05
VPS13AQ96RL7 AC073534.2-201ENST00000620377 381 ntBASIC-4.01□□□□□ -3.05
VPS13AQ96RL7 U6.115-201ENST00000636045 103 ntBASIC-4.01□□□□□ -3.05
VPS13AQ96RL7 Y_RNA.15-201ENST00000362420 102 ntBASIC-4.02□□□□□ -3.05
VPS13AQ96RL7 RNU6-361P-201ENST00000364454 107 ntBASIC-4.02□□□□□ -3.05
VPS13AQ96RL7 MIR206-201ENST00000384872 86 ntBASIC-4.02□□□□□ -3.05
VPS13AQ96RL7 SNORA22.1-201ENST00000362701 134 ntBASIC-4.02□□□□□ -3.05
VPS13AQ96RL7 RNU6-238P-201ENST00000363313 106 ntBASIC-4.02□□□□□ -3.05
VPS13AQ96RL7 Y_RNA.321-201ENST00000365149 102 ntBASIC-4.02□□□□□ -3.05
VPS13AQ96RL7 SNORA17.4-201ENST00000391287 132 ntBASIC-4.02□□□□□ -3.05
VPS13AQ96RL7 RNU7-80P-201ENST00000459562 61 ntBASIC-4.02□□□□□ -3.05
VPS13AQ96RL7 RNU6-64P-201ENST00000517119 105 ntBASIC-4.02□□□□□ -3.05
VPS13AQ96RL7 AC122108.2-201ENST00000611946 526 ntBASIC-4.02□□□□□ -3.05
VPS13AQ96RL7 AC137499.1-201ENST00000427602 88 ntBASIC-4.03□□□□□ -3.05
VPS13AQ96RL7 RNU6-822P-201ENST00000362707 106 ntBASIC-4.03□□□□□ -3.05
VPS13AQ96RL7 SNORA36B-201ENST00000410438 131 ntBASIC-4.03□□□□□ -3.05
VPS13AQ96RL7 AC245884.10-201ENST00000597355 337 ntBASIC-4.03□□□□□ -3.05
VPS13AQ96RL7 SNORD114-7-201ENST00000362520 77 ntBASIC-4.04□□□□□ -3.06
VPS13AQ96RL7 AC005828.6-201ENST00000606610 232 ntBASIC-4.04□□□□□ -3.06
VPS13AQ96RL7 RNU6-1039P-201ENST00000383931 107 ntBASIC-4.04□□□□□ -3.06
VPS13AQ96RL7 MIR548A3-201ENST00000385297 97 ntBASIC-4.05□□□□□ -3.06
VPS13AQ96RL7 Y_RNA.649-201ENST00000459077 103 ntBASIC-4.05□□□□□ -3.06
VPS13AQ96RL7 MTND3P22-201ENST00000510932 243 ntBASIC-4.05□□□□□ -3.06
VPS13AQ96RL7 MTATP6P24-201ENST00000576835 677 ntBASIC-4.05□□□□□ -3.06
VPS13AQ96RL7 AC119751.7-201ENST00000600494 245 ntBASIC-4.05□□□□□ -3.06
VPS13AQ96RL7 AC005014.3-201ENST00000605985 190 ntBASIC-4.05□□□□□ -3.06
VPS13AQ96RL7 RNU4-85P-201ENST00000364675 123 ntBASIC-4.06□□□□□ -3.06
VPS13AQ96RL7 MTND3P25-201ENST00000509243 135 ntBASIC-4.06□□□□□ -3.06
VPS13AQ96RL7 SNORD63.2-201ENST00000516303 64 ntBASIC-4.06□□□□□ -3.06
VPS13AQ96RL7 MTRNR2L9-201ENST00000622562 75 ntBASIC-4.06□□□□□ -3.06
VPS13AQ96RL7 SNORD27-201ENST00000363981 72 ntBASIC-4.06□□□□□ -3.06
VPS13AQ96RL7 Y_RNA.325-201ENST00000365171 122 ntBASIC-4.06□□□□□ -3.06
VPS13AQ96RL7 Y_RNA.448-201ENST00000384185 108 ntBASIC-4.06□□□□□ -3.06
VPS13AQ96RL7 RNU6-481P-201ENST00000384194 107 ntBASIC-4.06□□□□□ -3.06
VPS13AQ96RL7 DEFB108A-201ENST00000530110 222 ntBASIC-4.06□□□□□ -3.06
VPS13AQ96RL7 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.06□□□□□ -3.06
VPS13AQ96RL7 AC087741.2-201ENST00000619415 172 ntBASIC-4.06□□□□□ -3.06
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms