Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MIR934-201ENST00000401241 83 ntBASIC1.77□□□□□ -2.13
PTCHD1Q96NR3 RNU6-762P-201ENST00000517107 102 ntBASIC1.77□□□□□ -2.13
PTCHD1Q96NR3 AC026421.1-201ENST00000519101 163 ntBASIC1.77□□□□□ -2.13
PTCHD1Q96NR3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.77□□□□□ -2.13
PTCHD1Q96NR3 AP001362.1-201ENST00000625165 124 ntBASIC1.77□□□□□ -2.13
PTCHD1Q96NR3 RNU6-813P-201ENST00000384691 107 ntBASIC1.76□□□□□ -2.13
PTCHD1Q96NR3 U8.13-201ENST00000390842 128 ntBASIC1.76□□□□□ -2.13
PTCHD1Q96NR3 RNU6-482P-201ENST00000391068 107 ntBASIC1.76□□□□□ -2.13
PTCHD1Q96NR3 RNU6-972P-201ENST00000391208 107 ntBASIC1.76□□□□□ -2.13
PTCHD1Q96NR3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.76□□□□□ -2.13
PTCHD1Q96NR3 RNU6-887P-201ENST00000410660 100 ntBASIC1.76□□□□□ -2.13
PTCHD1Q96NR3 BTF3P4-201ENST00000418852 495 ntBASIC1.76□□□□□ -2.13
PTCHD1Q96NR3 RNU7-62P-201ENST00000458856 62 ntBASIC1.76□□□□□ -2.13
PTCHD1Q96NR3 RNU6-548P-201ENST00000517083 115 ntBASIC1.76□□□□□ -2.13
PTCHD1Q96NR3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.76□□□□□ -2.13
PTCHD1Q96NR3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 MIR30D-201ENST00000362283 70 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 RNA5SP432-201ENST00000362480 116 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 RNU6-654P-201ENST00000364373 107 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 RNU6-1163P-201ENST00000364516 107 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 RNU6-1134P-201ENST00000365156 101 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 SNORD38.2-201ENST00000384470 69 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 MIR548G-201ENST00000408442 89 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 RNU6-613P-201ENST00000410412 108 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 RNU6-295P-201ENST00000516901 104 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 RNU6-165P-201ENST00000517170 99 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 AL512310.8-201ENST00000550183 120 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 SNORA4-201ENST00000584302 138 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 AL161722.3-201ENST00000605789 2983 ntBASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PTCHD1Q96NR3 MIR377-201ENST00000362145 69 ntBASIC1.74□□□□□ -2.13
PTCHD1Q96NR3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.74□□□□□ -2.13
PTCHD1Q96NR3 AL591806.2-201ENST00000433122 173 ntBASIC1.74□□□□□ -2.13
PTCHD1Q96NR3 AC003989.2-201ENST00000440224 169 ntBASIC1.74□□□□□ -2.13
PTCHD1Q96NR3 SPINT5P-201ENST00000448174 155 ntBASIC1.74□□□□□ -2.13
PTCHD1Q96NR3 RNU6-90P-201ENST00000606352 106 ntBASIC1.74□□□□□ -2.13
PTCHD1Q96NR3 RNU6-86P-201ENST00000606534 107 ntBASIC1.74□□□□□ -2.13
PTCHD1Q96NR3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.73□□□□□ -2.13
PTCHD1Q96NR3 RNY1P2-201ENST00000364820 117 ntBASIC1.73□□□□□ -2.13
PTCHD1Q96NR3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PTCHD1Q96NR3 SNORA26.2-201ENST00000390922 122 ntBASIC1.73□□□□□ -2.13
PTCHD1Q96NR3 AC015712.3-201ENST00000559380 164 ntBASIC1.73□□□□□ -2.13
PTCHD1Q96NR3 MTND5P40-201ENST00000559945 246 ntBASIC1.73□□□□□ -2.13
PTCHD1Q96NR3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
PTCHD1Q96NR3 MIR4769-201ENST00000584126 77 ntBASIC1.73□□□□□ -2.13
PTCHD1Q96NR3 SEPT14P17-201ENST00000617978 177 ntBASIC1.73□□□□□ -2.13
PTCHD1Q96NR3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PTCHD1Q96NR3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PTCHD1Q96NR3 SNORA16.1-201ENST00000364597 132 ntBASIC1.72□□□□□ -2.13
PTCHD1Q96NR3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.72□□□□□ -2.13
PTCHD1Q96NR3 U8.15-201ENST00000390947 134 ntBASIC1.72□□□□□ -2.13
PTCHD1Q96NR3 RNU1-78P-201ENST00000391248 165 ntBASIC1.72□□□□□ -2.13
PTCHD1Q96NR3 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
PTCHD1Q96NR3 SUMO2P12-201ENST00000405924 140 ntBASIC1.72□□□□□ -2.13
PTCHD1Q96NR3 RNA5SP95-201ENST00000410319 137 ntBASIC1.72□□□□□ -2.13
PTCHD1Q96NR3 RNY4P29-201ENST00000410801 97 ntBASIC1.72□□□□□ -2.13
PTCHD1Q96NR3 AC245517.4-201ENST00000448601 281 ntBASIC1.72□□□□□ -2.13
PTCHD1Q96NR3 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
PTCHD1Q96NR3 MIR6845-201ENST00000613182 61 ntBASIC1.72□□□□□ -2.13
PTCHD1Q96NR3 Y_RNA.190-201ENST00000363964 101 ntBASIC1.71□□□□□ -2.14
PTCHD1Q96NR3 MT-TF-201ENST00000387314 71 ntBASIC1.71□□□□□ -2.14
PTCHD1Q96NR3 RPS27P16-201ENST00000425758 201 ntBASIC1.71□□□□□ -2.14
PTCHD1Q96NR3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.71□□□□□ -2.14
PTCHD1Q96NR3 RPS29P11-201ENST00000496507 171 ntBASIC1.71□□□□□ -2.14
PTCHD1Q96NR3 AC103810.7-201ENST00000607821 91 ntBASIC1.71□□□□□ -2.14
PTCHD1Q96NR3 uc_338.6-201ENST00000613544 171 ntBASIC1.71□□□□□ -2.14
PTCHD1Q96NR3 AC012676.2-201ENST00000619258 186 ntBASIC1.71□□□□□ -2.14
PTCHD1Q96NR3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PTCHD1Q96NR3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.71□□□□□ -2.14
PTCHD1Q96NR3 RNU6-1244P-201ENST00000363614 108 ntBASIC1.7□□□□□ -2.14
PTCHD1Q96NR3 RNU6-580P-201ENST00000365159 107 ntBASIC1.7□□□□□ -2.14
PTCHD1Q96NR3 MIR450A2-201ENST00000385022 100 ntBASIC1.7□□□□□ -2.14
PTCHD1Q96NR3 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
PTCHD1Q96NR3 AC138749.4-201ENST00000563970 127 ntBASIC1.7□□□□□ -2.14
PTCHD1Q96NR3 MIR4422-201ENST00000581938 83 ntBASIC1.7□□□□□ -2.14
PTCHD1Q96NR3 AC062037.1-201ENST00000605302 128 ntBASIC1.7□□□□□ -2.14
PTCHD1Q96NR3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.69□□□□□ -2.14
PTCHD1Q96NR3 SNORD58A-201ENST00000383875 65 ntBASIC1.69□□□□□ -2.14
PTCHD1Q96NR3 Y_RNA.388-201ENST00000383919 113 ntBASIC1.69□□□□□ -2.14
PTCHD1Q96NR3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.69□□□□□ -2.14
PTCHD1Q96NR3 AC048334.1-201ENST00000477975 159 ntBASIC1.69□□□□□ -2.14
PTCHD1Q96NR3 RN7SKP88-201ENST00000516847 250 ntBASIC1.69□□□□□ -2.14
PTCHD1Q96NR3 AC024614.2-201ENST00000577584 372 ntBASIC1.69□□□□□ -2.14
PTCHD1Q96NR3 7SK.8-201ENST00000612110 250 ntBASIC1.69□□□□□ -2.14
PTCHD1Q96NR3 7SK.11-201ENST00000615477 250 ntBASIC1.69□□□□□ -2.14
PTCHD1Q96NR3 AL353997.5-201ENST00000618886 171 ntBASIC1.69□□□□□ -2.14
PTCHD1Q96NR3 7SK.13-201ENST00000622040 250 ntBASIC1.69□□□□□ -2.14
PTCHD1Q96NR3 U6.109-201ENST00000636749 87 ntBASIC1.69□□□□□ -2.14
PTCHD1Q96NR3 HSBP1P2-201ENST00000299671 229 ntBASIC1.68□□□□□ -2.14
PTCHD1Q96NR3 Y_RNA.17-201ENST00000362433 111 ntBASIC1.68□□□□□ -2.14
PTCHD1Q96NR3 SNORD116-10-201ENST00000363791 102 ntBASIC1.68□□□□□ -2.14
PTCHD1Q96NR3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.68□□□□□ -2.14
PTCHD1Q96NR3 AC090897.1-201ENST00000580909 226 ntBASIC1.68□□□□□ -2.14
PTCHD1Q96NR3 AC084768.2-201ENST00000622736 221 ntBASIC1.68□□□□□ -2.14
PTCHD1Q96NR3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.68□□□□□ -2.14
PTCHD1Q96NR3 RNA5SP133-201ENST00000363368 119 ntBASIC1.67□□□□□ -2.14
PTCHD1Q96NR3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
PTCHD1Q96NR3 Y_RNA.593-201ENST00000410292 98 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 242.2 ms