Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 AC004941.2-201ENST00000427009 228 ntBASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 snoU13.2-201ENST00000459201 104 ntBASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 RNU7-61P-201ENST00000515897 61 ntBASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 MIR4303-201ENST00000581299 66 ntBASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 AP000753.3-201ENST00000604083 169 ntBASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 Y_RNA.95-201ENST00000363079 95 ntBASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 RNU6-60P-201ENST00000364792 103 ntBASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 MIR34C-201ENST00000384831 77 ntBASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 RNU6-205P-201ENST00000390858 107 ntBASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 RNU6-1321P-201ENST00000390905 107 ntBASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 RPS29P28-201ENST00000446439 141 ntBASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 MIR2115-201ENST00000516657 100 ntBASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 SNORA31.24-201ENST00000517232 57 ntBASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 AL645939.4-201ENST00000604495 135 ntBASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 MIR376B-201ENST00000614515 100 ntBASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 AL662814.1-201ENST00000617364 121 ntBASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
PDLIM2Q96JY6 MIR103A2-201ENST00000362154 78 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 Y_RNA.140-201ENST00000363474 103 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 Y_RNA.247-201ENST00000364500 92 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6-447P-201ENST00000410293 104 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6-1118P-201ENST00000410382 104 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6-1076P-201ENST00000410397 104 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6-355P-201ENST00000410427 104 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6-791P-201ENST00000410467 104 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6-705P-201ENST00000410601 104 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6-1100P-201ENST00000410691 104 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6-860P-201ENST00000410860 104 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6-1217P-201ENST00000411276 104 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6-785P-201ENST00000411324 104 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 AC108667.1-201ENST00000428618 249 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU7-48P-201ENST00000458875 63 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNA5SP458-201ENST00000516188 119 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6-162P-201ENST00000516228 103 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 SNORA72.7-201ENST00000516349 94 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 RNU6-844P-201ENST00000517175 102 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 MIR4777-201ENST00000583710 86 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 U6.90-201ENST00000614007 104 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 U6.70-201ENST00000620287 104 ntBASIC1.43□□□□□ -2.18
PDLIM2Q96JY6 Y_RNA.98-201ENST00000363109 102 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 RNA5SP264-201ENST00000363115 107 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 SNORD38.1-201ENST00000363863 68 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 SNORD73B-201ENST00000364394 72 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 MIR934-201ENST00000401241 83 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 MIR1185-1-201ENST00000408598 86 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 AC096949.1-201ENST00000412047 152 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 AC109327.2-201ENST00000448339 378 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 RPL30P7-201ENST00000479312 323 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 MIR3664-201ENST00000579074 99 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 MIR4264-201ENST00000583520 66 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 MIR6740-201ENST00000618268 113 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 MIR6516-201ENST00000630554 81 ntBASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
PDLIM2Q96JY6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 Y_RNA.290-201ENST00000364879 114 ntBASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 Y_RNA.467-201ENST00000384297 102 ntBASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 Y_RNA.558-201ENST00000384685 113 ntBASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 MRPL35P3-201ENST00000421557 364 ntBASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 RNU11-2P-201ENST00000516898 142 ntBASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 RNU6-1006P-201ENST00000516998 103 ntBASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 AP003716.2-201ENST00000528260 108 ntBASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 AC133485.1-201ENST00000567176 124 ntBASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 MIR3198-2-201ENST00000577868 80 ntBASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 U7.3-201ENST00000616123 62 ntBASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
PDLIM2Q96JY6 Y_RNA.96-201ENST00000363092 109 ntBASIC1.4□□□□□ -2.19
PDLIM2Q96JY6 RNU6-949P-201ENST00000384040 107 ntBASIC1.4□□□□□ -2.19
PDLIM2Q96JY6 MT-TN-201ENST00000387400 73 ntBASIC1.4□□□□□ -2.19
PDLIM2Q96JY6 RNU4-62P-201ENST00000410125 130 ntBASIC1.4□□□□□ -2.19
PDLIM2Q96JY6 RNU7-62P-201ENST00000458856 62 ntBASIC1.4□□□□□ -2.19
PDLIM2Q96JY6 RNU1-123P-201ENST00000458950 160 ntBASIC1.4□□□□□ -2.19
PDLIM2Q96JY6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.4□□□□□ -2.19
PDLIM2Q96JY6 RNU6-86P-201ENST00000606534 107 ntBASIC1.4□□□□□ -2.19
PDLIM2Q96JY6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.4□□□□□ -2.19
PDLIM2Q96JY6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
PDLIM2Q96JY6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 RNU6-654P-201ENST00000364373 107 ntBASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 SNORD38.2-201ENST00000384470 69 ntBASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 MIR563-201ENST00000385080 79 ntBASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 RNU6-1165P-201ENST00000410119 107 ntBASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 SPINT5P-201ENST00000448174 155 ntBASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 AC004223.1-201ENST00000479840 271 ntBASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 AC008834.1-201ENST00000511612 175 ntBASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 Y_RNA.705-201ENST00000516862 110 ntBASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 RNU6-165P-201ENST00000517170 99 ntBASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 AL512310.8-201ENST00000550183 120 ntBASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 MIR4439-201ENST00000583746 80 ntBASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 SNORA4-201ENST00000584302 138 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 435.7 ms