Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 MIR206-201ENST00000384872 86 ntBASIC1.69□□□□□ -2.14
SHCBP1Q8NEM2 MIR489-201ENST00000384923 84 ntBASIC1.69□□□□□ -2.14
SHCBP1Q8NEM2 RNU6-1086P-201ENST00000410930 100 ntBASIC1.69□□□□□ -2.14
SHCBP1Q8NEM2 RNU7-2P-201ENST00000516096 62 ntBASIC1.69□□□□□ -2.14
SHCBP1Q8NEM2 RNU6-795P-201ENST00000516323 103 ntBASIC1.69□□□□□ -2.14
SHCBP1Q8NEM2 SNORD67.1-201ENST00000516618 108 ntBASIC1.69□□□□□ -2.14
SHCBP1Q8NEM2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.69□□□□□ -2.14
SHCBP1Q8NEM2 MALAT1.1-201ENST00000618249 95 ntBASIC1.69□□□□□ -2.14
SHCBP1Q8NEM2 MIR8063-201ENST00000621930 81 ntBASIC1.69□□□□□ -2.14
SHCBP1Q8NEM2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.69□□□□□ -2.14
SHCBP1Q8NEM2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SHCBP1Q8NEM2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SHCBP1Q8NEM2 MIR302D-201ENST00000362275 68 ntBASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 RNU6-170P-201ENST00000362832 104 ntBASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 Y_RNA.342-201ENST00000365352 113 ntBASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 RNU6-1237P-201ENST00000384777 107 ntBASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 AC244023.1-201ENST00000426884 112 ntBASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 AL354695.1-201ENST00000427935 228 ntBASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 HSPE1P24-201ENST00000450782 238 ntBASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 MIR548Z-201ENST00000584743 97 ntBASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 AC242498.1-201ENST00000604134 111 ntBASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 AL512310.12-203ENST00000640543 90 ntBASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 AC091304.10-201ENST00000641554 121 ntBASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
SHCBP1Q8NEM2 SNORA25.3-201ENST00000363205 127 ntBASIC1.67□□□□□ -2.14
SHCBP1Q8NEM2 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
SHCBP1Q8NEM2 snoU13.9-201ENST00000458927 103 ntBASIC1.67□□□□□ -2.14
SHCBP1Q8NEM2 UBL5P1-201ENST00000507979 193 ntBASIC1.67□□□□□ -2.14
SHCBP1Q8NEM2 RNU7-137P-201ENST00000516788 62 ntBASIC1.67□□□□□ -2.14
SHCBP1Q8NEM2 AL442128.1-201ENST00000615151 90 ntBASIC1.67□□□□□ -2.14
SHCBP1Q8NEM2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
SHCBP1Q8NEM2 MIR1304-201ENST00000408243 91 ntBASIC1.66□□□□□ -2.14
SHCBP1Q8NEM2 AC004941.2-201ENST00000427009 228 ntBASIC1.66□□□□□ -2.14
SHCBP1Q8NEM2 RNU7-61P-201ENST00000515897 61 ntBASIC1.66□□□□□ -2.14
SHCBP1Q8NEM2 RNU6-947P-201ENST00000516264 106 ntBASIC1.66□□□□□ -2.14
SHCBP1Q8NEM2 MIR4777-201ENST00000583710 86 ntBASIC1.66□□□□□ -2.14
SHCBP1Q8NEM2 AL353770.2-201ENST00000620024 78 ntBASIC1.66□□□□□ -2.14
SHCBP1Q8NEM2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
SHCBP1Q8NEM2 Y_RNA.220-201ENST00000364244 109 ntBASIC1.65□□□□□ -2.15
SHCBP1Q8NEM2 Y_RNA.247-201ENST00000364500 92 ntBASIC1.65□□□□□ -2.15
SHCBP1Q8NEM2 SNORD1A-201ENST00000364968 72 ntBASIC1.65□□□□□ -2.15
SHCBP1Q8NEM2 RNY1P13-201ENST00000365030 105 ntBASIC1.65□□□□□ -2.15
SHCBP1Q8NEM2 Y_RNA.448-201ENST00000384185 108 ntBASIC1.65□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-644P-201ENST00000391155 98 ntBASIC1.65□□□□□ -2.15
SHCBP1Q8NEM2 AC096949.1-201ENST00000412047 152 ntBASIC1.65□□□□□ -2.15
SHCBP1Q8NEM2 RNU1-123P-201ENST00000458950 160 ntBASIC1.65□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-1006P-201ENST00000516998 103 ntBASIC1.65□□□□□ -2.15
SHCBP1Q8NEM2 SNORA4-201ENST00000584302 138 ntBASIC1.65□□□□□ -2.15
SHCBP1Q8NEM2 AC105081.1-201ENST00000617727 106 ntBASIC1.65□□□□□ -2.15
SHCBP1Q8NEM2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 SNORD114-10-201ENST00000363409 72 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 SNORD73B-201ENST00000364394 72 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 SNORD45B-201ENST00000364617 72 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 MIR34C-201ENST00000384831 77 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-1321P-201ENST00000390905 107 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 Y_RNA.659-201ENST00000515994 113 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 SNORA72.7-201ENST00000516349 94 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-844P-201ENST00000517175 102 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 AC019176.1-201ENST00000518519 225 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 AP003716.2-201ENST00000528260 108 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 AC141846.1-201ENST00000568348 142 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 AL078603.1-201ENST00000603824 313 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 MIR376B-201ENST00000614515 100 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 AL662814.1-201ENST00000617364 121 ntBASIC1.64□□□□□ -2.15
SHCBP1Q8NEM2 Y_RNA.95-201ENST00000363079 95 ntBASIC1.63□□□□□ -2.15
SHCBP1Q8NEM2 Y_RNA.191-201ENST00000363972 113 ntBASIC1.63□□□□□ -2.15
SHCBP1Q8NEM2 Y_RNA.290-201ENST00000364879 114 ntBASIC1.63□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-42P-201ENST00000384165 107 ntBASIC1.63□□□□□ -2.15
SHCBP1Q8NEM2 RNU1-78P-201ENST00000391248 165 ntBASIC1.63□□□□□ -2.15
SHCBP1Q8NEM2 RNU1-98P-201ENST00000458992 160 ntBASIC1.63□□□□□ -2.15
SHCBP1Q8NEM2 snoU13.2-201ENST00000459201 104 ntBASIC1.63□□□□□ -2.15
SHCBP1Q8NEM2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.63□□□□□ -2.15
SHCBP1Q8NEM2 Y_RNA.467-201ENST00000384297 102 ntBASIC1.62□□□□□ -2.15
SHCBP1Q8NEM2 Y_RNA.558-201ENST00000384685 113 ntBASIC1.62□□□□□ -2.15
SHCBP1Q8NEM2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.62□□□□□ -2.15
SHCBP1Q8NEM2 RNA5SP237-201ENST00000410414 113 ntBASIC1.62□□□□□ -2.15
SHCBP1Q8NEM2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.62□□□□□ -2.15
SHCBP1Q8NEM2 RPL39P39-201ENST00000455840 151 ntBASIC1.62□□□□□ -2.15
SHCBP1Q8NEM2 RNA5SP102-201ENST00000516865 106 ntBASIC1.62□□□□□ -2.15
SHCBP1Q8NEM2 MIR4422-201ENST00000581938 83 ntBASIC1.62□□□□□ -2.15
SHCBP1Q8NEM2 MIR4452-201ENST00000583004 71 ntBASIC1.62□□□□□ -2.15
SHCBP1Q8NEM2 AC096720.1-201ENST00000604441 183 ntBASIC1.62□□□□□ -2.15
SHCBP1Q8NEM2 MIR6740-201ENST00000618268 113 ntBASIC1.62□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-396P-201ENST00000365369 105 ntBASIC1.61□□□□□ -2.15
SHCBP1Q8NEM2 MIR588-201ENST00000384900 83 ntBASIC1.61□□□□□ -2.15
SHCBP1Q8NEM2 MIR1185-1-201ENST00000408598 86 ntBASIC1.61□□□□□ -2.15
SHCBP1Q8NEM2 MRPL35P3-201ENST00000421557 364 ntBASIC1.61□□□□□ -2.15
SHCBP1Q8NEM2 AL133373.1-201ENST00000497098 94 ntBASIC1.61□□□□□ -2.15
SHCBP1Q8NEM2 AC079140.2-201ENST00000506193 142 ntBASIC1.61□□□□□ -2.15
SHCBP1Q8NEM2 RNA5SP220-201ENST00000516298 104 ntBASIC1.61□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-762P-201ENST00000517107 102 ntBASIC1.61□□□□□ -2.15
SHCBP1Q8NEM2 U7.3-201ENST00000616123 62 ntBASIC1.61□□□□□ -2.15
SHCBP1Q8NEM2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.61□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-865P-201ENST00000364772 107 ntBASIC1.6□□□□□ -2.15
SHCBP1Q8NEM2 MIR563-201ENST00000385080 79 ntBASIC1.6□□□□□ -2.15
SHCBP1Q8NEM2 MIR1302-4-201ENST00000408701 150 ntBASIC1.6□□□□□ -2.15
SHCBP1Q8NEM2 AC027119.1-201ENST00000440877 241 ntBASIC1.6□□□□□ -2.15
SHCBP1Q8NEM2 AC109327.2-201ENST00000448339 378 ntBASIC1.6□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-162P-201ENST00000516228 103 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms