Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 MIR8081-201ENST00000611533 95 ntBASIC1.5□□□□□ -2.17
HIPK4Q8NE63 U6.90-201ENST00000614007 104 ntBASIC1.5□□□□□ -2.17
HIPK4Q8NE63 MIR376B-201ENST00000614515 100 ntBASIC1.5□□□□□ -2.17
HIPK4Q8NE63 U6.70-201ENST00000620287 104 ntBASIC1.5□□□□□ -2.17
HIPK4Q8NE63 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HIPK4Q8NE63 RNU6-1298P-201ENST00000362456 101 ntBASIC1.49□□□□□ -2.17
HIPK4Q8NE63 Y_RNA.247-201ENST00000364500 92 ntBASIC1.49□□□□□ -2.17
HIPK4Q8NE63 Y_RNA.544-201ENST00000384650 113 ntBASIC1.49□□□□□ -2.17
HIPK4Q8NE63 SNORA26.9-201ENST00000391322 122 ntBASIC1.49□□□□□ -2.17
HIPK4Q8NE63 RNU7-48P-201ENST00000458875 63 ntBASIC1.49□□□□□ -2.17
HIPK4Q8NE63 SNORD79.1-201ENST00000516069 84 ntBASIC1.49□□□□□ -2.17
HIPK4Q8NE63 Y_RNA.677-201ENST00000516401 85 ntBASIC1.49□□□□□ -2.17
HIPK4Q8NE63 AL442128.1-201ENST00000615151 90 ntBASIC1.49□□□□□ -2.17
HIPK4Q8NE63 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
HIPK4Q8NE63 RNU6-640P-201ENST00000363693 105 ntBASIC1.48□□□□□ -2.17
HIPK4Q8NE63 SNORD113.3-201ENST00000364630 78 ntBASIC1.48□□□□□ -2.17
HIPK4Q8NE63 RNU6-905P-201ENST00000384434 107 ntBASIC1.48□□□□□ -2.17
HIPK4Q8NE63 SNORA80D-201ENST00000384488 135 ntBASIC1.48□□□□□ -2.17
HIPK4Q8NE63 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
HIPK4Q8NE63 Y_RNA.601-201ENST00000410500 113 ntBASIC1.48□□□□□ -2.17
HIPK4Q8NE63 AL591704.2-201ENST00000421658 181 ntBASIC1.48□□□□□ -2.17
HIPK4Q8NE63 MIR18B-201ENST00000454574 71 ntBASIC1.48□□□□□ -2.17
HIPK4Q8NE63 RNU6-548P-201ENST00000517083 115 ntBASIC1.48□□□□□ -2.17
HIPK4Q8NE63 AC012676.2-201ENST00000619258 186 ntBASIC1.48□□□□□ -2.17
HIPK4Q8NE63 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HIPK4Q8NE63 RNU6-865P-201ENST00000364772 107 ntBASIC1.47□□□□□ -2.17
HIPK4Q8NE63 MIR504-201ENST00000385065 83 ntBASIC1.47□□□□□ -2.17
HIPK4Q8NE63 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HIPK4Q8NE63 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
HIPK4Q8NE63 SCARNA23-201ENST00000516060 130 ntBASIC1.47□□□□□ -2.17
HIPK4Q8NE63 Y_RNA.10-201ENST00000362371 110 ntBASIC1.46□□□□□ -2.18
HIPK4Q8NE63 Y_RNA.98-201ENST00000363109 102 ntBASIC1.46□□□□□ -2.18
HIPK4Q8NE63 Y_RNA.466-201ENST00000384294 113 ntBASIC1.46□□□□□ -2.18
HIPK4Q8NE63 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.46□□□□□ -2.18
HIPK4Q8NE63 RNU6-158P-201ENST00000517104 100 ntBASIC1.46□□□□□ -2.18
HIPK4Q8NE63 AC138749.4-201ENST00000563970 127 ntBASIC1.46□□□□□ -2.18
HIPK4Q8NE63 AC133485.1-201ENST00000567176 124 ntBASIC1.46□□□□□ -2.18
HIPK4Q8NE63 AC023827.1-201ENST00000569247 97 ntBASIC1.46□□□□□ -2.18
HIPK4Q8NE63 AC106800.4-201ENST00000614905 153 ntBASIC1.46□□□□□ -2.18
HIPK4Q8NE63 AC091304.10-201ENST00000641554 121 ntBASIC1.46□□□□□ -2.18
HIPK4Q8NE63 RNU1-42P-201ENST00000364033 160 ntBASIC1.45□□□□□ -2.18
HIPK4Q8NE63 RNY1P2-201ENST00000364820 117 ntBASIC1.45□□□□□ -2.18
HIPK4Q8NE63 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
HIPK4Q8NE63 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
HIPK4Q8NE63 BX248123.2-201ENST00000606318 124 ntBASIC1.45□□□□□ -2.18
HIPK4Q8NE63 AC012531.4-201ENST00000616509 177 ntBASIC1.45□□□□□ -2.18
HIPK4Q8NE63 AP001362.1-201ENST00000625165 124 ntBASIC1.45□□□□□ -2.18
HIPK4Q8NE63 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HIPK4Q8NE63 Y_RNA.140-201ENST00000363474 103 ntBASIC1.44□□□□□ -2.18
HIPK4Q8NE63 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.44□□□□□ -2.18
HIPK4Q8NE63 SNORD111-201ENST00000408139 94 ntBASIC1.44□□□□□ -2.18
HIPK4Q8NE63 SNORD83.1-201ENST00000411362 77 ntBASIC1.44□□□□□ -2.18
HIPK4Q8NE63 MRPL35P3-201ENST00000421557 364 ntBASIC1.44□□□□□ -2.18
HIPK4Q8NE63 RNU6-795P-201ENST00000516323 103 ntBASIC1.44□□□□□ -2.18
HIPK4Q8NE63 SNORA70.22-201ENST00000517160 124 ntBASIC1.44□□□□□ -2.18
HIPK4Q8NE63 MIR4298-201ENST00000584380 73 ntBASIC1.44□□□□□ -2.18
HIPK4Q8NE63 MIR548Z-201ENST00000584743 97 ntBASIC1.44□□□□□ -2.18
HIPK4Q8NE63 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.44□□□□□ -2.18
HIPK4Q8NE63 RNA5SP327-201ENST00000362494 101 ntBASIC1.43□□□□□ -2.18
HIPK4Q8NE63 RNU6-170P-201ENST00000362832 104 ntBASIC1.43□□□□□ -2.18
HIPK4Q8NE63 Y_RNA.93-201ENST00000363066 109 ntBASIC1.43□□□□□ -2.18
HIPK4Q8NE63 Y_RNA.107-201ENST00000363190 121 ntBASIC1.43□□□□□ -2.18
HIPK4Q8NE63 SNORD38.1-201ENST00000363863 68 ntBASIC1.43□□□□□ -2.18
HIPK4Q8NE63 MTATP8P2-201ENST00000435212 202 ntBASIC1.43□□□□□ -2.18
HIPK4Q8NE63 RPS29P28-201ENST00000446439 141 ntBASIC1.43□□□□□ -2.18
HIPK4Q8NE63 RNU7-90P-201ENST00000459216 62 ntBASIC1.43□□□□□ -2.18
HIPK4Q8NE63 SNORA40.13-201ENST00000516379 120 ntBASIC1.43□□□□□ -2.18
HIPK4Q8NE63 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
HIPK4Q8NE63 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.43□□□□□ -2.18
HIPK4Q8NE63 U6.109-201ENST00000636749 87 ntBASIC1.43□□□□□ -2.18
HIPK4Q8NE63 AC008163.1-202ENST00000636004 2889 ntBASIC1.42□□□□□ -2.18
HIPK4Q8NE63 RNU1-36P-201ENST00000365130 165 ntBASIC1.42□□□□□ -2.18
HIPK4Q8NE63 SNORD26-201ENST00000384147 75 ntBASIC1.42□□□□□ -2.18
HIPK4Q8NE63 SNORD12-201ENST00000391002 90 ntBASIC1.42□□□□□ -2.18
HIPK4Q8NE63 Y_RNA.588-201ENST00000391254 102 ntBASIC1.42□□□□□ -2.18
HIPK4Q8NE63 AC004941.2-201ENST00000427009 228 ntBASIC1.42□□□□□ -2.18
HIPK4Q8NE63 Y_RNA.659-201ENST00000515994 113 ntBASIC1.42□□□□□ -2.18
HIPK4Q8NE63 MIR4777-201ENST00000583710 86 ntBASIC1.42□□□□□ -2.18
HIPK4Q8NE63 AC096720.1-201ENST00000604441 183 ntBASIC1.42□□□□□ -2.18
HIPK4Q8NE63 MIR7843-201ENST00000622274 79 ntBASIC1.42□□□□□ -2.18
HIPK4Q8NE63 Y_RNA.95-201ENST00000363079 95 ntBASIC1.41□□□□□ -2.18
HIPK4Q8NE63 RNA5SP133-201ENST00000363368 119 ntBASIC1.41□□□□□ -2.18
HIPK4Q8NE63 SNORD45B-201ENST00000364617 72 ntBASIC1.41□□□□□ -2.18
HIPK4Q8NE63 RNU6-934P-201ENST00000365154 107 ntBASIC1.41□□□□□ -2.18
HIPK4Q8NE63 AC015818.7-201ENST00000428754 109 ntBASIC1.41□□□□□ -2.18
HIPK4Q8NE63 AL591806.2-201ENST00000433122 173 ntBASIC1.41□□□□□ -2.18
HIPK4Q8NE63 AC087499.7-201ENST00000441958 109 ntBASIC1.41□□□□□ -2.18
HIPK4Q8NE63 RNU7-185P-201ENST00000459215 60 ntBASIC1.41□□□□□ -2.18
HIPK4Q8NE63 Y_RNA.694-201ENST00000516677 117 ntBASIC1.41□□□□□ -2.18
HIPK4Q8NE63 RNA5SP170-201ENST00000517150 101 ntBASIC1.41□□□□□ -2.18
HIPK4Q8NE63 MIR4491-201ENST00000581087 68 ntBASIC1.41□□□□□ -2.18
HIPK4Q8NE63 AC023934.1-201ENST00000574529 2389 ntBASIC1.41□□□□□ -2.18
HIPK4Q8NE63 HSBP1P2-201ENST00000299671 229 ntBASIC1.4□□□□□ -2.19
HIPK4Q8NE63 RNA5SP190-201ENST00000365222 118 ntBASIC1.4□□□□□ -2.19
HIPK4Q8NE63 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
HIPK4Q8NE63 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
HIPK4Q8NE63 SNORD93-201ENST00000408813 74 ntBASIC1.4□□□□□ -2.19
HIPK4Q8NE63 RNU7-40P-201ENST00000516397 64 ntBASIC1.4□□□□□ -2.19
HIPK4Q8NE63 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
HIPK4Q8NE63 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 269 ms