Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 RNU6-1082P-201ENST00000364574 107 ntBASIC0.15□□□□□ -2.39
SKA3Q8IX90 RNU6-47P-201ENST00000383866 107 ntBASIC0.15□□□□□ -2.39
SKA3Q8IX90 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
SKA3Q8IX90 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
SKA3Q8IX90 RNA5SP227-201ENST00000516184 113 ntBASIC0.15□□□□□ -2.39
SKA3Q8IX90 RNA5SP33-201ENST00000516687 98 ntBASIC0.15□□□□□ -2.39
SKA3Q8IX90 RNU6-531P-201ENST00000516694 104 ntBASIC0.15□□□□□ -2.39
SKA3Q8IX90 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
SKA3Q8IX90 RNU6-1099P-201ENST00000363533 107 ntBASIC0.14□□□□□ -2.39
SKA3Q8IX90 RNU6-818P-201ENST00000364837 108 ntBASIC0.14□□□□□ -2.39
SKA3Q8IX90 RNU6-815P-201ENST00000384080 113 ntBASIC0.14□□□□□ -2.39
SKA3Q8IX90 RNU6-863P-201ENST00000515989 104 ntBASIC0.14□□□□□ -2.39
SKA3Q8IX90 RNU6-1219P-201ENST00000516143 112 ntBASIC0.14□□□□□ -2.39
SKA3Q8IX90 RNA5SP47-201ENST00000517230 109 ntBASIC0.14□□□□□ -2.39
SKA3Q8IX90 MIR4503-201ENST00000582187 83 ntBASIC0.14□□□□□ -2.39
SKA3Q8IX90 RN7SL793P-201ENST00000583259 296 ntBASIC0.14□□□□□ -2.39
SKA3Q8IX90 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
SKA3Q8IX90 AC010487.4-201ENST00000637027 61 ntBASIC0.14□□□□□ -2.39
SKA3Q8IX90 RNU4-58P-201ENST00000363192 141 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 Y_RNA.120-201ENST00000363304 110 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 Y_RNA.193-201ENST00000363979 102 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 Y_RNA.452-201ENST00000384202 108 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 RNU6-574P-201ENST00000384265 107 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 SNORA75.5-201ENST00000391291 81 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 RNU2-59P-201ENST00000410482 191 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 AC069113.3-201ENST00000521019 150 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 AC112693.2-201ENST00000556538 232 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 MIR4305-201ENST00000583252 102 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 MIR548AE2-201ENST00000583456 67 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 MIR3149-201ENST00000584629 83 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 MIR6828-201ENST00000636181 60 ntBASIC0.13□□□□□ -2.39
SKA3Q8IX90 SNORD115-2-201ENST00000362842 82 ntBASIC0.12□□□□□ -2.39
SKA3Q8IX90 SNORD115-20-201ENST00000365099 82 ntBASIC0.12□□□□□ -2.39
SKA3Q8IX90 Y_RNA.337-201ENST00000365312 102 ntBASIC0.12□□□□□ -2.39
SKA3Q8IX90 AC069271.1-201ENST00000445577 156 ntBASIC0.12□□□□□ -2.39
SKA3Q8IX90 RNU6-240P-201ENST00000516098 97 ntBASIC0.12□□□□□ -2.39
SKA3Q8IX90 SNORD67.1-201ENST00000516618 108 ntBASIC0.12□□□□□ -2.39
SKA3Q8IX90 RNU7-137P-201ENST00000516788 62 ntBASIC0.12□□□□□ -2.39
SKA3Q8IX90 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.12□□□□□ -2.39
SKA3Q8IX90 MIR4639-201ENST00000584938 69 ntBASIC0.12□□□□□ -2.39
SKA3Q8IX90 AC009779.6-201ENST00000603972 165 ntBASIC0.12□□□□□ -2.39
SKA3Q8IX90 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.12□□□□□ -2.39
SKA3Q8IX90 AC091304.10-201ENST00000641554 121 ntBASIC0.12□□□□□ -2.39
SKA3Q8IX90 SNORA63.5-201ENST00000363548 123 ntBASIC0.11□□□□□ -2.39
SKA3Q8IX90 Y_RNA.233-201ENST00000364407 101 ntBASIC0.11□□□□□ -2.39
SKA3Q8IX90 RNY1P4-201ENST00000384595 115 ntBASIC0.11□□□□□ -2.39
SKA3Q8IX90 SNORD28-201ENST00000384706 75 ntBASIC0.11□□□□□ -2.39
SKA3Q8IX90 MIRLET7F2-201ENST00000385277 83 ntBASIC0.11□□□□□ -2.39
SKA3Q8IX90 Y_RNA.793-201ENST00000411222 111 ntBASIC0.11□□□□□ -2.39
SKA3Q8IX90 RNU2-35P-201ENST00000516446 142 ntBASIC0.11□□□□□ -2.39
SKA3Q8IX90 AC138749.4-201ENST00000563970 127 ntBASIC0.11□□□□□ -2.39
SKA3Q8IX90 AC130289.1-201ENST00000577321 73 ntBASIC0.11□□□□□ -2.39
SKA3Q8IX90 AL359881.1-201ENST00000602916 267 ntBASIC0.11□□□□□ -2.39
SKA3Q8IX90 AC011603.4-201ENST00000611325 277 ntBASIC0.11□□□□□ -2.39
SKA3Q8IX90 AC244669.1-204ENST00000621564 178 ntBASIC0.11□□□□□ -2.39
SKA3Q8IX90 MIR101-2-201ENST00000362195 79 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 RNU6-312P-201ENST00000364629 107 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 Y_RNA.366-201ENST00000365540 102 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 Y_RNA.497-201ENST00000384447 98 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 RNU2-60P-201ENST00000517290 128 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 AC022559.1-201ENST00000520905 205 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 AC138907.4-201ENST00000570107 226 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 AC021443.1-201ENST00000604478 211 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 AC098479.1-201ENST00000609225 154 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 TUG1_4.1-201ENST00000619464 181 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 MIR6755-201ENST00000619993 66 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
SKA3Q8IX90 RNA5SP245-201ENST00000364239 121 ntBASIC0.09□□□□□ -2.4
SKA3Q8IX90 Y_RNA.274-201ENST00000364714 101 ntBASIC0.09□□□□□ -2.4
SKA3Q8IX90 RNU6-187P-201ENST00000384139 106 ntBASIC0.09□□□□□ -2.4
SKA3Q8IX90 Y_RNA.531-201ENST00000384589 121 ntBASIC0.09□□□□□ -2.4
SKA3Q8IX90 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
SKA3Q8IX90 MTATP6P21-201ENST00000440681 189 ntBASIC0.09□□□□□ -2.4
SKA3Q8IX90 RNU7-129P-201ENST00000516128 62 ntBASIC0.09□□□□□ -2.4
SKA3Q8IX90 MIR4514-201ENST00000581410 57 ntBASIC0.09□□□□□ -2.4
SKA3Q8IX90 MIR4719-201ENST00000585233 84 ntBASIC0.09□□□□□ -2.4
SKA3Q8IX90 MIR6844-201ENST00000637122 62 ntBASIC0.09□□□□□ -2.4
SKA3Q8IX90 SNORA9.1-201ENST00000362412 131 ntBASIC0.08□□□□□ -2.4
SKA3Q8IX90 Y_RNA.357-201ENST00000365487 109 ntBASIC0.08□□□□□ -2.4
SKA3Q8IX90 Y_RNA.423-201ENST00000384057 113 ntBASIC0.08□□□□□ -2.4
SKA3Q8IX90 RNU6-588P-201ENST00000410281 105 ntBASIC0.08□□□□□ -2.4
SKA3Q8IX90 RNU7-123P-201ENST00000515911 60 ntBASIC0.08□□□□□ -2.4
SKA3Q8IX90 MIR3646-201ENST00000578301 84 ntBASIC0.08□□□□□ -2.4
SKA3Q8IX90 AC105081.1-201ENST00000617727 106 ntBASIC0.08□□□□□ -2.4
SKA3Q8IX90 MIR3658-201ENST00000636291 56 ntBASIC0.08□□□□□ -2.4
SKA3Q8IX90 SNORD114-10-201ENST00000363409 72 ntBASIC0.07□□□□□ -2.4
SKA3Q8IX90 RNU6-1126P-201ENST00000384002 107 ntBASIC0.07□□□□□ -2.4
SKA3Q8IX90 RNU7-164P-201ENST00000459221 62 ntBASIC0.07□□□□□ -2.4
SKA3Q8IX90 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.07□□□□□ -2.4
SKA3Q8IX90 Y_RNA.119-201ENST00000363301 96 ntBASIC0.06□□□□□ -2.4
SKA3Q8IX90 SNORA42.1-201ENST00000363515 137 ntBASIC0.06□□□□□ -2.4
SKA3Q8IX90 Y_RNA.144-201ENST00000363521 113 ntBASIC0.06□□□□□ -2.4
SKA3Q8IX90 RNY1P2-201ENST00000364820 117 ntBASIC0.06□□□□□ -2.4
SKA3Q8IX90 RNU6-716P-201ENST00000365621 103 ntBASIC0.06□□□□□ -2.4
SKA3Q8IX90 Y_RNA.489-201ENST00000384410 101 ntBASIC0.06□□□□□ -2.4
SKA3Q8IX90 MIR760-201ENST00000390220 80 ntBASIC0.06□□□□□ -2.4
SKA3Q8IX90 SNORD37.2-201ENST00000391075 66 ntBASIC0.06□□□□□ -2.4
SKA3Q8IX90 PCNPP3-201ENST00000393579 471 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms