Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.01□□□□□ -2.41
ATL3Q6DD88 AC244669.1-204ENST00000621564 178 ntBASIC0.01□□□□□ -2.41
ATL3Q6DD88 SNORD115-2-201ENST00000362842 82 ntBASIC0□□□□□ -2.41
ATL3Q6DD88 Y_RNA.121-201ENST00000363309 113 ntBASIC0□□□□□ -2.41
ATL3Q6DD88 SNORD115-20-201ENST00000365099 82 ntBASIC0□□□□□ -2.41
ATL3Q6DD88 Y_RNA.470-201ENST00000384307 117 ntBASIC0□□□□□ -2.41
ATL3Q6DD88 SNORA72.6-201ENST00000384520 129 ntBASIC0□□□□□ -2.41
ATL3Q6DD88 RNU6-1160P-201ENST00000384546 104 ntBASIC0□□□□□ -2.41
ATL3Q6DD88 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0□□□□□ -2.41
ATL3Q6DD88 PCNPP3-201ENST00000393579 471 ntBASIC0□□□□□ -2.41
ATL3Q6DD88 RNA5SP144-201ENST00000410846 116 ntBASIC0□□□□□ -2.41
ATL3Q6DD88 SNORD127-201ENST00000458892 86 ntBASIC0□□□□□ -2.41
ATL3Q6DD88 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
ATL3Q6DD88 TUG1_4.1-201ENST00000619464 181 ntBASIC0□□□□□ -2.41
ATL3Q6DD88 SNORA9.1-201ENST00000362412 131 ntBASIC-0.01□□□□□ -2.41
ATL3Q6DD88 RNU4-16P-201ENST00000364737 141 ntBASIC-0.01□□□□□ -2.41
ATL3Q6DD88 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.01□□□□□ -2.41
ATL3Q6DD88 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.01□□□□□ -2.41
ATL3Q6DD88 RNA5SP227-201ENST00000516184 113 ntBASIC-0.01□□□□□ -2.41
ATL3Q6DD88 RNU2-4P-201ENST00000606190 192 ntBASIC-0.01□□□□□ -2.41
ATL3Q6DD88 RNU1-29P-201ENST00000606574 126 ntBASIC-0.01□□□□□ -2.41
ATL3Q6DD88 MIR411-201ENST00000362239 96 ntBASIC-0.02□□□□□ -2.41
ATL3Q6DD88 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.02□□□□□ -2.41
ATL3Q6DD88 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.02□□□□□ -2.41
ATL3Q6DD88 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.02□□□□□ -2.41
ATL3Q6DD88 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.02□□□□□ -2.41
ATL3Q6DD88 RNU6-531P-201ENST00000516694 104 ntBASIC-0.02□□□□□ -2.41
ATL3Q6DD88 AP003072.1-201ENST00000531740 145 ntBASIC-0.02□□□□□ -2.41
ATL3Q6DD88 AL117187.1-201ENST00000555482 181 ntBASIC-0.02□□□□□ -2.41
ATL3Q6DD88 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
ATL3Q6DD88 AC104408.1-201ENST00000605241 170 ntBASIC-0.02□□□□□ -2.41
ATL3Q6DD88 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.02□□□□□ -2.41
ATL3Q6DD88 AC067863.3-201ENST00000624172 122 ntBASIC-0.02□□□□□ -2.41
ATL3Q6DD88 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.03□□□□□ -2.41
ATL3Q6DD88 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.03□□□□□ -2.41
ATL3Q6DD88 RNU6-643P-201ENST00000384018 107 ntBASIC-0.03□□□□□ -2.41
ATL3Q6DD88 RNY1P6-201ENST00000384193 109 ntBASIC-0.03□□□□□ -2.41
ATL3Q6DD88 MIR1912-201ENST00000410389 80 ntBASIC-0.03□□□□□ -2.41
ATL3Q6DD88 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.03□□□□□ -2.41
ATL3Q6DD88 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.03□□□□□ -2.41
ATL3Q6DD88 RNA5SP236-201ENST00000516169 116 ntBASIC-0.03□□□□□ -2.41
ATL3Q6DD88 IGLVI-20-201ENST00000519296 130 ntBASIC-0.03□□□□□ -2.41
ATL3Q6DD88 MIR4308-201ENST00000580634 81 ntBASIC-0.03□□□□□ -2.41
ATL3Q6DD88 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.04□□□□□ -2.42
ATL3Q6DD88 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.04□□□□□ -2.42
ATL3Q6DD88 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.04□□□□□ -2.42
ATL3Q6DD88 RNU6-493P-201ENST00000391321 108 ntBASIC-0.04□□□□□ -2.42
ATL3Q6DD88 RNU2-38P-201ENST00000410856 79 ntBASIC-0.04□□□□□ -2.42
ATL3Q6DD88 MTND1P19-201ENST00000511780 315 ntBASIC-0.04□□□□□ -2.42
ATL3Q6DD88 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.04□□□□□ -2.42
ATL3Q6DD88 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.05□□□□□ -2.42
ATL3Q6DD88 SNORA25.7-201ENST00000364375 127 ntBASIC-0.05□□□□□ -2.42
ATL3Q6DD88 RNY4P3-201ENST00000365254 95 ntBASIC-0.05□□□□□ -2.42
ATL3Q6DD88 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.05□□□□□ -2.42
ATL3Q6DD88 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.05□□□□□ -2.42
ATL3Q6DD88 RNU6-127P-201ENST00000390897 107 ntBASIC-0.05□□□□□ -2.42
ATL3Q6DD88 MIR548H2-201ENST00000408874 88 ntBASIC-0.05□□□□□ -2.42
ATL3Q6DD88 snoU13.19-201ENST00000459148 104 ntBASIC-0.05□□□□□ -2.42
ATL3Q6DD88 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.05□□□□□ -2.42
ATL3Q6DD88 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
ATL3Q6DD88 AC006504.6-201ENST00000590142 199 ntBASIC-0.05□□□□□ -2.42
ATL3Q6DD88 RNU4-58P-201ENST00000363192 141 ntBASIC-0.06□□□□□ -2.42
ATL3Q6DD88 RNA5SP133-201ENST00000363368 119 ntBASIC-0.06□□□□□ -2.42
ATL3Q6DD88 SNORA63.5-201ENST00000363548 123 ntBASIC-0.06□□□□□ -2.42
ATL3Q6DD88 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.06□□□□□ -2.42
ATL3Q6DD88 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.06□□□□□ -2.42
ATL3Q6DD88 RNU7-113P-201ENST00000459273 62 ntBASIC-0.06□□□□□ -2.42
ATL3Q6DD88 AC138749.4-201ENST00000563970 127 ntBASIC-0.06□□□□□ -2.42
ATL3Q6DD88 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.06□□□□□ -2.42
ATL3Q6DD88 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.07□□□□□ -2.42
ATL3Q6DD88 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.07□□□□□ -2.42
ATL3Q6DD88 RNU6-726P-201ENST00000364680 107 ntBASIC-0.07□□□□□ -2.42
ATL3Q6DD88 RNU6-275P-201ENST00000364910 107 ntBASIC-0.07□□□□□ -2.42
ATL3Q6DD88 RNU6-702P-201ENST00000364982 107 ntBASIC-0.07□□□□□ -2.42
ATL3Q6DD88 MIR606-201ENST00000384851 96 ntBASIC-0.07□□□□□ -2.42
ATL3Q6DD88 AC244505.6-201ENST00000452829 130 ntBASIC-0.07□□□□□ -2.42
ATL3Q6DD88 RNA5SP33-201ENST00000516687 98 ntBASIC-0.07□□□□□ -2.42
ATL3Q6DD88 RNU7-137P-201ENST00000516788 62 ntBASIC-0.07□□□□□ -2.42
ATL3Q6DD88 AC141557.1-201ENST00000540982 400 ntBASIC-0.07□□□□□ -2.42
ATL3Q6DD88 MIR4752-201ENST00000579672 72 ntBASIC-0.07□□□□□ -2.42
ATL3Q6DD88 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.08□□□□□ -2.42
ATL3Q6DD88 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.08□□□□□ -2.42
ATL3Q6DD88 RNA5SP128-201ENST00000365305 116 ntBASIC-0.08□□□□□ -2.42
ATL3Q6DD88 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.08□□□□□ -2.42
ATL3Q6DD88 MIR760-201ENST00000390220 80 ntBASIC-0.08□□□□□ -2.42
ATL3Q6DD88 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
ATL3Q6DD88 MIR548H3-201ENST00000408771 118 ntBASIC-0.08□□□□□ -2.42
ATL3Q6DD88 MTND2P23-201ENST00000422990 651 ntBASIC-0.08□□□□□ -2.42
ATL3Q6DD88 RPL39P34-201ENST00000477141 156 ntBASIC-0.08□□□□□ -2.42
ATL3Q6DD88 RNU6-758P-201ENST00000516292 89 ntBASIC-0.08□□□□□ -2.42
ATL3Q6DD88 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.08□□□□□ -2.42
ATL3Q6DD88 AC008737.2-201ENST00000599446 118 ntBASIC-0.08□□□□□ -2.42
ATL3Q6DD88 AL359881.1-201ENST00000602916 267 ntBASIC-0.08□□□□□ -2.42
ATL3Q6DD88 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.09□□□□□ -2.42
ATL3Q6DD88 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.09□□□□□ -2.42
ATL3Q6DD88 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.09□□□□□ -2.42
ATL3Q6DD88 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.09□□□□□ -2.42
ATL3Q6DD88 RNU6-46P-201ENST00000383860 107 ntBASIC-0.09□□□□□ -2.42
ATL3Q6DD88 RNU6-738P-201ENST00000384531 106 ntBASIC-0.09□□□□□ -2.42
ATL3Q6DD88 AL022718.1-201ENST00000412004 84 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 409 ms