Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC012531.4-201ENST00000616509 177 ntBASIC2.15□□□□□ -2.07
USPL1Q5W0Q7 AL662814.1-201ENST00000617364 121 ntBASIC2.15□□□□□ -2.07
USPL1Q5W0Q7 MIR8063-201ENST00000621930 81 ntBASIC2.15□□□□□ -2.07
USPL1Q5W0Q7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.15□□□□□ -2.07
USPL1Q5W0Q7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USPL1Q5W0Q7 Y_RNA.98-201ENST00000363109 102 ntBASIC2.14□□□□□ -2.07
USPL1Q5W0Q7 MIR1302-7-201ENST00000408841 72 ntBASIC2.14□□□□□ -2.07
USPL1Q5W0Q7 RN7SL274P-201ENST00000492268 272 ntBASIC2.14□□□□□ -2.07
USPL1Q5W0Q7 AC141846.1-201ENST00000568348 142 ntBASIC2.14□□□□□ -2.07
USPL1Q5W0Q7 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
USPL1Q5W0Q7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
USPL1Q5W0Q7 SNORD1A-201ENST00000364968 72 ntBASIC2.13□□□□□ -2.07
USPL1Q5W0Q7 RNY1P13-201ENST00000365030 105 ntBASIC2.13□□□□□ -2.07
USPL1Q5W0Q7 SNORD38.2-201ENST00000384470 69 ntBASIC2.13□□□□□ -2.07
USPL1Q5W0Q7 AC244023.1-201ENST00000426884 112 ntBASIC2.13□□□□□ -2.07
USPL1Q5W0Q7 Y_RNA.705-201ENST00000516862 110 ntBASIC2.13□□□□□ -2.07
USPL1Q5W0Q7 MIR4419B-201ENST00000577260 68 ntBASIC2.13□□□□□ -2.07
USPL1Q5W0Q7 AC242498.1-201ENST00000604134 111 ntBASIC2.13□□□□□ -2.07
USPL1Q5W0Q7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.13□□□□□ -2.07
USPL1Q5W0Q7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USPL1Q5W0Q7 RNU6-949P-201ENST00000384040 107 ntBASIC2.12□□□□□ -2.07
USPL1Q5W0Q7 Y_RNA.448-201ENST00000384185 108 ntBASIC2.12□□□□□ -2.07
USPL1Q5W0Q7 MIR563-201ENST00000385080 79 ntBASIC2.12□□□□□ -2.07
USPL1Q5W0Q7 MIR676-201ENST00000390702 67 ntBASIC2.12□□□□□ -2.07
USPL1Q5W0Q7 RNU6-972P-201ENST00000391208 107 ntBASIC2.12□□□□□ -2.07
USPL1Q5W0Q7 RPS29P28-201ENST00000446439 141 ntBASIC2.12□□□□□ -2.07
USPL1Q5W0Q7 RNU6-795P-201ENST00000516323 103 ntBASIC2.12□□□□□ -2.07
USPL1Q5W0Q7 RNU6-1006P-201ENST00000516998 103 ntBASIC2.12□□□□□ -2.07
USPL1Q5W0Q7 AP003716.2-201ENST00000528260 108 ntBASIC2.12□□□□□ -2.07
USPL1Q5W0Q7 MIR4777-201ENST00000583710 86 ntBASIC2.12□□□□□ -2.07
USPL1Q5W0Q7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.12□□□□□ -2.07
USPL1Q5W0Q7 MIR377-201ENST00000362145 69 ntBASIC2.11□□□□□ -2.07
USPL1Q5W0Q7 RNU1-42P-201ENST00000364033 160 ntBASIC2.11□□□□□ -2.07
USPL1Q5W0Q7 RNU6-1237P-201ENST00000384777 107 ntBASIC2.11□□□□□ -2.07
USPL1Q5W0Q7 RNU7-48P-201ENST00000458875 63 ntBASIC2.11□□□□□ -2.07
USPL1Q5W0Q7 RNU7-61P-201ENST00000515897 61 ntBASIC2.11□□□□□ -2.07
USPL1Q5W0Q7 RNA5SP364-201ENST00000516938 78 ntBASIC2.11□□□□□ -2.07
USPL1Q5W0Q7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USPL1Q5W0Q7 MIR588-201ENST00000384900 83 ntBASIC2.1□□□□□ -2.07
USPL1Q5W0Q7 RNU6-1321P-201ENST00000390905 107 ntBASIC2.1□□□□□ -2.07
USPL1Q5W0Q7 UBL5P1-201ENST00000507979 193 ntBASIC2.1□□□□□ -2.07
USPL1Q5W0Q7 RNA5SP445-201ENST00000515889 115 ntBASIC2.1□□□□□ -2.07
USPL1Q5W0Q7 RNU6-947P-201ENST00000516264 106 ntBASIC2.1□□□□□ -2.07
USPL1Q5W0Q7 SNORD73B-201ENST00000364394 72 ntBASIC2.09□□□□□ -2.07
USPL1Q5W0Q7 RNU6-644P-201ENST00000391155 98 ntBASIC2.09□□□□□ -2.07
USPL1Q5W0Q7 RNU2-40P-201ENST00000410833 196 ntBASIC2.09□□□□□ -2.07
USPL1Q5W0Q7 AC027119.1-201ENST00000440877 241 ntBASIC2.09□□□□□ -2.07
USPL1Q5W0Q7 AC133485.1-201ENST00000567176 124 ntBASIC2.09□□□□□ -2.07
USPL1Q5W0Q7 uc_338.20-201ENST00000621563 178 ntBASIC2.09□□□□□ -2.07
USPL1Q5W0Q7 AP001362.1-201ENST00000625165 124 ntBASIC2.09□□□□□ -2.07
USPL1Q5W0Q7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
USPL1Q5W0Q7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.09□□□□□ -2.08
USPL1Q5W0Q7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
USPL1Q5W0Q7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 RNA5SP264-201ENST00000363115 107 ntBASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 Y_RNA.290-201ENST00000364879 114 ntBASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 Y_RNA.327-201ENST00000365201 102 ntBASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 MIR34C-201ENST00000384831 77 ntBASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 RNU6-613P-201ENST00000410412 108 ntBASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 RNU6-887P-201ENST00000410660 100 ntBASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 AC005908.1-201ENST00000468701 347 ntBASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 AC008834.1-201ENST00000511612 175 ntBASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 AC026421.1-201ENST00000519101 163 ntBASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 MIR376B-201ENST00000614515 100 ntBASIC2.08□□□□□ -2.08
USPL1Q5W0Q7 SNORA25.3-201ENST00000363205 127 ntBASIC2.07□□□□□ -2.08
USPL1Q5W0Q7 RNU6-813P-201ENST00000384691 107 ntBASIC2.07□□□□□ -2.08
USPL1Q5W0Q7 RNY1P7-201ENST00000384743 110 ntBASIC2.07□□□□□ -2.08
USPL1Q5W0Q7 RNU6-1307P-201ENST00000391012 103 ntBASIC2.07□□□□□ -2.08
USPL1Q5W0Q7 SNORD53B-201ENST00000577887 78 ntBASIC2.07□□□□□ -2.08
USPL1Q5W0Q7 MIR3664-201ENST00000579074 99 ntBASIC2.07□□□□□ -2.08
USPL1Q5W0Q7 MIR3937-201ENST00000580135 106 ntBASIC2.07□□□□□ -2.08
USPL1Q5W0Q7 SNORA4-201ENST00000584302 138 ntBASIC2.07□□□□□ -2.08
USPL1Q5W0Q7 U7.3-201ENST00000616123 62 ntBASIC2.07□□□□□ -2.08
USPL1Q5W0Q7 AC091304.10-201ENST00000641554 121 ntBASIC2.07□□□□□ -2.08
USPL1Q5W0Q7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USPL1Q5W0Q7 MIR103A2-201ENST00000362154 78 ntBASIC2.06□□□□□ -2.08
USPL1Q5W0Q7 RNY1P2-201ENST00000364820 117 ntBASIC2.06□□□□□ -2.08
USPL1Q5W0Q7 MIR489-201ENST00000384923 84 ntBASIC2.06□□□□□ -2.08
USPL1Q5W0Q7 MT-TF-201ENST00000387314 71 ntBASIC2.06□□□□□ -2.08
USPL1Q5W0Q7 AC245517.4-201ENST00000448601 281 ntBASIC2.06□□□□□ -2.08
USPL1Q5W0Q7 snoU13.25-201ENST00000458945 104 ntBASIC2.06□□□□□ -2.08
USPL1Q5W0Q7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.06□□□□□ -2.08
USPL1Q5W0Q7 MIR4422-201ENST00000581938 83 ntBASIC2.06□□□□□ -2.08
USPL1Q5W0Q7 RNU6-90P-201ENST00000606352 106 ntBASIC2.06□□□□□ -2.08
USPL1Q5W0Q7 AC105081.1-201ENST00000617727 106 ntBASIC2.06□□□□□ -2.08
USPL1Q5W0Q7 RNU1-78P-201ENST00000391248 165 ntBASIC2.05□□□□□ -2.08
USPL1Q5W0Q7 MIR548G-201ENST00000408442 89 ntBASIC2.05□□□□□ -2.08
USPL1Q5W0Q7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.05□□□□□ -2.08
USPL1Q5W0Q7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.05□□□□□ -2.08
USPL1Q5W0Q7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.05□□□□□ -2.08
USPL1Q5W0Q7 SNORD116-10-201ENST00000363791 102 ntBASIC2.04□□□□□ -2.08
USPL1Q5W0Q7 RNU6-392P-201ENST00000364926 101 ntBASIC2.04□□□□□ -2.08
USPL1Q5W0Q7 MIR1185-1-201ENST00000408598 86 ntBASIC2.04□□□□□ -2.08
USPL1Q5W0Q7 MIR1276-201ENST00000408707 83 ntBASIC2.04□□□□□ -2.08
USPL1Q5W0Q7 RNU6-1165P-201ENST00000410119 107 ntBASIC2.04□□□□□ -2.08
USPL1Q5W0Q7 AC109327.2-201ENST00000448339 378 ntBASIC2.04□□□□□ -2.08
USPL1Q5W0Q7 RNU7-62P-201ENST00000458856 62 ntBASIC2.04□□□□□ -2.08
USPL1Q5W0Q7 AC019176.1-201ENST00000518519 225 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms