Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AC244098.3-201ENST00000424803 96 ntBASIC4.25□□□□□ -1.73
NCBP3Q53F19 SNORA31.25-201ENST00000517242 134 ntBASIC4.25□□□□□ -1.73
NCBP3Q53F19 AP003716.2-201ENST00000528260 108 ntBASIC4.25□□□□□ -1.73
NCBP3Q53F19 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC4.25□□□□□ -1.73
NCBP3Q53F19 MIR622-201ENST00000638396 96 ntBASIC4.25□□□□□ -1.73
NCBP3Q53F19 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NCBP3Q53F19 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC4.24□□□□□ -1.73
NCBP3Q53F19 RNA5SP383-201ENST00000362934 120 ntBASIC4.24□□□□□ -1.73
NCBP3Q53F19 RNU6-805P-201ENST00000365643 106 ntBASIC4.24□□□□□ -1.73
NCBP3Q53F19 SNORD23.1-201ENST00000408212 104 ntBASIC4.24□□□□□ -1.73
NCBP3Q53F19 RNU6-982P-201ENST00000516216 102 ntBASIC4.24□□□□□ -1.73
NCBP3Q53F19 RNU1-143P-201ENST00000516296 146 ntBASIC4.24□□□□□ -1.73
NCBP3Q53F19 RNU6-752P-201ENST00000516376 102 ntBASIC4.24□□□□□ -1.73
NCBP3Q53F19 SNRPGP19-201ENST00000603826 189 ntBASIC4.24□□□□□ -1.73
NCBP3Q53F19 U1.23-201ENST00000610293 146 ntBASIC4.24□□□□□ -1.73
NCBP3Q53F19 RNU1-68P-201ENST00000615382 146 ntBASIC4.24□□□□□ -1.73
NCBP3Q53F19 U1.39-201ENST00000621562 146 ntBASIC4.24□□□□□ -1.73
NCBP3Q53F19 FO624990.1-201ENST00000636373 85 ntBASIC4.24□□□□□ -1.73
NCBP3Q53F19 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
NCBP3Q53F19 RNA5SP264-201ENST00000363115 107 ntBASIC4.22□□□□□ -1.73
NCBP3Q53F19 AL691482.2-201ENST00000457453 84 ntBASIC4.22□□□□□ -1.73
NCBP3Q53F19 AC138907.6-201ENST00000568401 126 ntBASIC4.22□□□□□ -1.73
NCBP3Q53F19 AC138869.1-201ENST00000568623 124 ntBASIC4.22□□□□□ -1.73
NCBP3Q53F19 MIR5004-201ENST00000579078 107 ntBASIC4.22□□□□□ -1.73
NCBP3Q53F19 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
NCBP3Q53F19 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NCBP3Q53F19 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NCBP3Q53F19 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NCBP3Q53F19 AL596028.1-201ENST00000326971 197 ntBASIC4.21□□□□□ -1.74
NCBP3Q53F19 RNU6-829P-201ENST00000363700 112 ntBASIC4.21□□□□□ -1.74
NCBP3Q53F19 RNA5SP120-201ENST00000410900 112 ntBASIC4.21□□□□□ -1.74
NCBP3Q53F19 MIR4446-201ENST00000578505 67 ntBASIC4.21□□□□□ -1.74
NCBP3Q53F19 Y_RNA.258-201ENST00000364613 105 ntBASIC4.2□□□□□ -1.74
NCBP3Q53F19 snoU13.21-201ENST00000459368 105 ntBASIC4.2□□□□□ -1.74
NCBP3Q53F19 AC015688.6-201ENST00000577737 104 ntBASIC4.2□□□□□ -1.74
NCBP3Q53F19 RNU6-439P-201ENST00000384188 106 ntBASIC4.19□□□□□ -1.74
NCBP3Q53F19 AC115115.1-201ENST00000449927 248 ntBASIC4.19□□□□□ -1.74
NCBP3Q53F19 MIR7112-201ENST00000616126 65 ntBASIC4.19□□□□□ -1.74
NCBP3Q53F19 MIR3651-201ENST00000630427 90 ntBASIC4.19□□□□□ -1.74
NCBP3Q53F19 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NCBP3Q53F19 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NCBP3Q53F19 SNORA64.4-201ENST00000516632 81 ntBASIC4.18□□□□□ -1.74
NCBP3Q53F19 RNU6-250P-201ENST00000516958 103 ntBASIC4.18□□□□□ -1.74
NCBP3Q53F19 AL078603.1-201ENST00000603824 313 ntBASIC4.18□□□□□ -1.74
NCBP3Q53F19 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NCBP3Q53F19 Y_RNA.236-201ENST00000364427 111 ntBASIC4.17□□□□□ -1.74
NCBP3Q53F19 RNA5SP217-201ENST00000515959 91 ntBASIC4.17□□□□□ -1.74
NCBP3Q53F19 RNU6-1265P-201ENST00000516342 103 ntBASIC4.17□□□□□ -1.74
NCBP3Q53F19 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.17□□□□□ -1.74
NCBP3Q53F19 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.17□□□□□ -1.74
NCBP3Q53F19 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NCBP3Q53F19 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NCBP3Q53F19 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NCBP3Q53F19 SNORD56.3-201ENST00000363507 71 ntBASIC4.16□□□□□ -1.74
NCBP3Q53F19 MIR128-1-201ENST00000384921 82 ntBASIC4.16□□□□□ -1.74
NCBP3Q53F19 SNORD83.1-201ENST00000411362 77 ntBASIC4.16□□□□□ -1.74
NCBP3Q53F19 RN7SL499P-201ENST00000481141 276 ntBASIC4.16□□□□□ -1.74
NCBP3Q53F19 RNU6-765P-201ENST00000516916 99 ntBASIC4.16□□□□□ -1.74
NCBP3Q53F19 MIR5680-201ENST00000577577 84 ntBASIC4.16□□□□□ -1.74
NCBP3Q53F19 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NCBP3Q53F19 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NCBP3Q53F19 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
NCBP3Q53F19 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
NCBP3Q53F19 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.15□□□□□ -1.75
NCBP3Q53F19 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NCBP3Q53F19 SNORA38.1-201ENST00000364172 131 ntBASIC4.14□□□□□ -1.75
NCBP3Q53F19 RNU6-668P-201ENST00000364180 107 ntBASIC4.14□□□□□ -1.75
NCBP3Q53F19 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NCBP3Q53F19 U3.27-201ENST00000391237 200 ntBASIC4.14□□□□□ -1.75
NCBP3Q53F19 SNORA11.2-201ENST00000408318 127 ntBASIC4.14□□□□□ -1.75
NCBP3Q53F19 MTND4LP1-201ENST00000446263 157 ntBASIC4.14□□□□□ -1.75
NCBP3Q53F19 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NCBP3Q53F19 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NCBP3Q53F19 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
NCBP3Q53F19 RNU6-1079P-201ENST00000362861 110 ntBASIC4.13□□□□□ -1.75
NCBP3Q53F19 RNU6ATAC6P-201ENST00000408132 126 ntBASIC4.13□□□□□ -1.75
NCBP3Q53F19 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC4.13□□□□□ -1.75
NCBP3Q53F19 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.13□□□□□ -1.75
NCBP3Q53F19 Evf-2_5p.1-201ENST00000614213 142 ntBASIC4.13□□□□□ -1.75
NCBP3Q53F19 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NCBP3Q53F19 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
NCBP3Q53F19 SNORA6-201ENST00000384033 151 ntBASIC4.12□□□□□ -1.75
NCBP3Q53F19 MIR634-201ENST00000385208 97 ntBASIC4.12□□□□□ -1.75
NCBP3Q53F19 SNORA48.2-201ENST00000390926 124 ntBASIC4.12□□□□□ -1.75
NCBP3Q53F19 RNU6-287P-201ENST00000516230 98 ntBASIC4.12□□□□□ -1.75
NCBP3Q53F19 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC4.12□□□□□ -1.75
NCBP3Q53F19 AL021368.2-201ENST00000606125 5352 ntBASIC4.12□□□□□ -1.75
NCBP3Q53F19 ZNF658B-202ENST00000615961 3375 ntBASIC4.11□□□□□ -1.75
NCBP3Q53F19 RN7SL863P-201ENST00000462370 296 ntBASIC4.11□□□□□ -1.75
NCBP3Q53F19 AC055731.1-201ENST00000474387 401 ntBASIC4.11□□□□□ -1.75
NCBP3Q53F19 AC092634.7-201ENST00000621022 103 ntBASIC4.11□□□□□ -1.75
NCBP3Q53F19 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
NCBP3Q53F19 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC4.11□□□□□ -1.75
NCBP3Q53F19 RNA5SP245-201ENST00000364239 121 ntBASIC4.09□□□□□ -1.75
NCBP3Q53F19 SNORA16B-201ENST00000364674 135 ntBASIC4.09□□□□□ -1.75
NCBP3Q53F19 ATP6V0E1P3-201ENST00000420036 246 ntBASIC4.09□□□□□ -1.75
NCBP3Q53F19 MIR3605-201ENST00000583214 100 ntBASIC4.09□□□□□ -1.75
NCBP3Q53F19 RNU6-542P-201ENST00000516405 103 ntBASIC4.08□□□□□ -1.76
NCBP3Q53F19 SNORA31.11-201ENST00000516528 139 ntBASIC4.08□□□□□ -1.76
NCBP3Q53F19 SNORA54-201ENST00000384281 123 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms