Protein–RNA interactions for Protein: Q12981

BNIP1, Vesicle transport protein SEC20, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP1Q12981 SNORD115-20-201ENST00000365099 82 ntBASIC0.14□□□□□ -2.39
BNIP1Q12981 RNU6-187P-201ENST00000384139 106 ntBASIC0.14□□□□□ -2.39
BNIP1Q12981 SCARNA16.5-201ENST00000517114 183 ntBASIC0.14□□□□□ -2.39
BNIP1Q12981 AC022559.1-201ENST00000520905 205 ntBASIC0.14□□□□□ -2.39
BNIP1Q12981 MIR548AE2-201ENST00000583456 67 ntBASIC0.14□□□□□ -2.39
BNIP1Q12981 MIR3149-201ENST00000584629 83 ntBASIC0.14□□□□□ -2.39
BNIP1Q12981 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.14□□□□□ -2.39
BNIP1Q12981 U4.1-201ENST00000620349 87 ntBASIC0.14□□□□□ -2.39
BNIP1Q12981 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
BNIP1Q12981 RNY1P11-201ENST00000363759 113 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 Y_RNA.193-201ENST00000363979 102 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 AL022718.1-201ENST00000412004 84 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 MIR1270-201ENST00000459320 83 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 RNU6-1219P-201ENST00000516143 112 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 RNA5SP227-201ENST00000516184 113 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 SNORD67.1-201ENST00000516618 108 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 RNU2-60P-201ENST00000517290 128 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 DEFB131E-201ENST00000532329 154 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 AC112693.2-201ENST00000556538 232 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 AC138749.4-201ENST00000563970 127 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 AC244669.1-204ENST00000621564 178 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.13□□□□□ -2.39
BNIP1Q12981 U6.109-201ENST00000636749 87 ntBASIC0.13□□□□□ -2.39
BNIP1Q12981 RNU6-508P-201ENST00000363231 103 ntBASIC0.12□□□□□ -2.39
BNIP1Q12981 RNU6-690P-201ENST00000365242 106 ntBASIC0.12□□□□□ -2.39
BNIP1Q12981 Y_RNA.435-201ENST00000384095 112 ntBASIC0.12□□□□□ -2.39
BNIP1Q12981 MIR598-201ENST00000384868 97 ntBASIC0.12□□□□□ -2.39
BNIP1Q12981 MTND3P2-201ENST00000438452 342 ntBASIC0.12□□□□□ -2.39
BNIP1Q12981 RNU6-1194P-201ENST00000516208 104 ntBASIC0.12□□□□□ -2.39
BNIP1Q12981 RNU7-137P-201ENST00000516788 62 ntBASIC0.12□□□□□ -2.39
BNIP1Q12981 Y_RNA.83-201ENST00000363005 113 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 Y_RNA.200-201ENST00000364018 102 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 RNU6-702P-201ENST00000364982 107 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 Y_RNA.423-201ENST00000384057 113 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 Y_RNA.497-201ENST00000384447 98 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 Y_RNA.531-201ENST00000384589 121 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 Y_RNA.793-201ENST00000411222 111 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 snoU13.18-201ENST00000459483 104 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 RNU6-240P-201ENST00000516098 97 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 MIR4305-201ENST00000583252 102 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 MIR4639-201ENST00000584938 69 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 AC105081.1-201ENST00000617727 106 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 TUG1_4.1-201ENST00000619464 181 ntBASIC0.11□□□□□ -2.39
BNIP1Q12981 RNU6-1229P-201ENST00000364295 107 ntBASIC0.1□□□□□ -2.39
BNIP1Q12981 RNU6-588P-201ENST00000410281 105 ntBASIC0.1□□□□□ -2.39
BNIP1Q12981 RNU6-135P-201ENST00000516769 101 ntBASIC0.1□□□□□ -2.39
BNIP1Q12981 AC130289.1-201ENST00000577321 73 ntBASIC0.1□□□□□ -2.39
BNIP1Q12981 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
BNIP1Q12981 MIR924-201ENST00000638017 53 ntBASIC0.1□□□□□ -2.39
BNIP1Q12981 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
BNIP1Q12981 AC091304.10-201ENST00000641554 121 ntBASIC0.1□□□□□ -2.39
BNIP1Q12981 RNU4-58P-201ENST00000363192 141 ntBASIC0.09□□□□□ -2.4
BNIP1Q12981 RNU6-1020P-201ENST00000363684 107 ntBASIC0.09□□□□□ -2.4
BNIP1Q12981 RNU6-818P-201ENST00000364837 108 ntBASIC0.09□□□□□ -2.4
BNIP1Q12981 PCNPP3-201ENST00000393579 471 ntBASIC0.09□□□□□ -2.4
BNIP1Q12981 MIR4752-201ENST00000579672 72 ntBASIC0.09□□□□□ -2.4
BNIP1Q12981 AC009779.6-201ENST00000603972 165 ntBASIC0.09□□□□□ -2.4
BNIP1Q12981 Y_RNA.119-201ENST00000363301 96 ntBASIC0.08□□□□□ -2.4
BNIP1Q12981 Y_RNA.233-201ENST00000364407 101 ntBASIC0.08□□□□□ -2.4
BNIP1Q12981 RNU6-312P-201ENST00000364629 107 ntBASIC0.08□□□□□ -2.4
BNIP1Q12981 Y_RNA.274-201ENST00000364714 101 ntBASIC0.08□□□□□ -2.4
BNIP1Q12981 Y_RNA.357-201ENST00000365487 109 ntBASIC0.08□□□□□ -2.4
BNIP1Q12981 RNU6-196P-201ENST00000384315 107 ntBASIC0.08□□□□□ -2.4
BNIP1Q12981 AC108059.2-201ENST00000434626 151 ntBASIC0.08□□□□□ -2.4
BNIP1Q12981 AC107027.2-201ENST00000512197 115 ntBASIC0.08□□□□□ -2.4
BNIP1Q12981 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.08□□□□□ -2.4
BNIP1Q12981 MIR3658-201ENST00000636291 56 ntBASIC0.08□□□□□ -2.4
BNIP1Q12981 Y_RNA.49-201ENST00000362714 112 ntBASIC0.07□□□□□ -2.4
BNIP1Q12981 RNY1P2-201ENST00000364820 117 ntBASIC0.07□□□□□ -2.4
BNIP1Q12981 RNU6-1126P-201ENST00000384002 107 ntBASIC0.07□□□□□ -2.4
BNIP1Q12981 Y_RNA.452-201ENST00000384202 108 ntBASIC0.07□□□□□ -2.4
BNIP1Q12981 SNORA75.5-201ENST00000391291 81 ntBASIC0.07□□□□□ -2.4
BNIP1Q12981 RNU7-123P-201ENST00000515911 60 ntBASIC0.07□□□□□ -2.4
BNIP1Q12981 RNU6-1232P-201ENST00000516299 86 ntBASIC0.07□□□□□ -2.4
BNIP1Q12981 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.07□□□□□ -2.4
BNIP1Q12981 RNU1-29P-201ENST00000606574 126 ntBASIC0.07□□□□□ -2.4
BNIP1Q12981 MIR6844-201ENST00000637122 62 ntBASIC0.07□□□□□ -2.4
BNIP1Q12981 Y_RNA.337-201ENST00000365312 102 ntBASIC0.06□□□□□ -2.4
BNIP1Q12981 MIRLET7F2-201ENST00000385277 83 ntBASIC0.06□□□□□ -2.4
BNIP1Q12981 RNU7-164P-201ENST00000459221 62 ntBASIC0.06□□□□□ -2.4
BNIP1Q12981 Y_RNA.651-201ENST00000459380 103 ntBASIC0.06□□□□□ -2.4
BNIP1Q12981 AC138907.4-201ENST00000570107 226 ntBASIC0.06□□□□□ -2.4
BNIP1Q12981 MIR4514-201ENST00000581410 57 ntBASIC0.06□□□□□ -2.4
BNIP1Q12981 AC021443.1-201ENST00000604478 211 ntBASIC0.06□□□□□ -2.4
BNIP1Q12981 AC011603.4-201ENST00000611325 277 ntBASIC0.06□□□□□ -2.4
BNIP1Q12981 AC010487.4-201ENST00000637027 61 ntBASIC0.06□□□□□ -2.4
BNIP1Q12981 AC099654.10-201ENST00000640395 161 ntBASIC0.06□□□□□ -2.4
BNIP1Q12981 MIR101-2-201ENST00000362195 79 ntBASIC0.05□□□□□ -2.4
BNIP1Q12981 SNORD114-10-201ENST00000363409 72 ntBASIC0.05□□□□□ -2.4
BNIP1Q12981 RNU6-716P-201ENST00000365621 103 ntBASIC0.05□□□□□ -2.4
BNIP1Q12981 SNORA62.5-201ENST00000516634 120 ntBASIC0.05□□□□□ -2.4
BNIP1Q12981 AC141273.2-201ENST00000618989 130 ntBASIC0.05□□□□□ -2.4
BNIP1Q12981 SNORA9.1-201ENST00000362412 131 ntBASIC0.04□□□□□ -2.4
BNIP1Q12981 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
BNIP1Q12981 SNORD115-24-201ENST00000363528 82 ntBASIC0.04□□□□□ -2.4
BNIP1Q12981 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
BNIP1Q12981 RNU6-309P-201ENST00000364573 106 ntBASIC0.04□□□□□ -2.4
BNIP1Q12981 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.04□□□□□ -2.4
BNIP1Q12981 AC104408.1-201ENST00000605241 170 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 234.5 ms