Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-1053P-201ENST00000515930 101 ntBASIC1.05□□□□□ -2.24
RAE1P78406 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.05□□□□□ -2.24
RAE1P78406 MIR548AI-201ENST00000579940 88 ntBASIC1.05□□□□□ -2.24
RAE1P78406 AC023934.1-201ENST00000574529 2389 ntBASIC1.05□□□□□ -2.24
RAE1P78406 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
RAE1P78406 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
RAE1P78406 MIR337-201ENST00000362281 93 ntBASIC1.04□□□□□ -2.24
RAE1P78406 Y_RNA.344-201ENST00000365381 112 ntBASIC1.04□□□□□ -2.24
RAE1P78406 RNU6-880P-201ENST00000384526 107 ntBASIC1.04□□□□□ -2.24
RAE1P78406 AC007012.1-201ENST00000567192 175 ntBASIC1.04□□□□□ -2.24
RAE1P78406 MTND5P34-201ENST00000568888 325 ntBASIC1.04□□□□□ -2.24
RAE1P78406 MIR4498-201ENST00000577599 66 ntBASIC1.04□□□□□ -2.24
RAE1P78406 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.04□□□□□ -2.24
RAE1P78406 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.04□□□□□ -2.24
RAE1P78406 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
RAE1P78406 RNU6-1290P-201ENST00000362957 109 ntBASIC1.03□□□□□ -2.24
RAE1P78406 RNU6-1056P-201ENST00000383996 107 ntBASIC1.03□□□□□ -2.24
RAE1P78406 MIR206-201ENST00000384872 86 ntBASIC1.03□□□□□ -2.24
RAE1P78406 MIR548A1-201ENST00000385041 97 ntBASIC1.03□□□□□ -2.24
RAE1P78406 MIR942-201ENST00000401111 86 ntBASIC1.03□□□□□ -2.24
RAE1P78406 AC096949.1-201ENST00000412047 152 ntBASIC1.03□□□□□ -2.24
RAE1P78406 RNU7-2P-201ENST00000516096 62 ntBASIC1.03□□□□□ -2.24
RAE1P78406 Y_RNA.773-201ENST00000607168 90 ntBASIC1.03□□□□□ -2.24
RAE1P78406 AL136317.1-201ENST00000612653 226 ntBASIC1.03□□□□□ -2.24
RAE1P78406 MIR1-1-201ENST00000362147 71 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU1-36P-201ENST00000365130 165 ntBASIC1.02□□□□□ -2.25
RAE1P78406 SNORD116-21-201ENST00000384507 92 ntBASIC1.02□□□□□ -2.25
RAE1P78406 MIR125B2-201ENST00000385128 89 ntBASIC1.02□□□□□ -2.25
RAE1P78406 MIR100-201ENST00000385259 80 ntBASIC1.02□□□□□ -2.25
RAE1P78406 SNORD93-201ENST00000408813 74 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU6-447P-201ENST00000410293 104 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU6-1118P-201ENST00000410382 104 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU6-1076P-201ENST00000410397 104 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU6-355P-201ENST00000410427 104 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU6-791P-201ENST00000410467 104 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU6-705P-201ENST00000410601 104 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU6-1100P-201ENST00000410691 104 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU6-860P-201ENST00000410860 104 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU6-1217P-201ENST00000411276 104 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU6-785P-201ENST00000411324 104 ntBASIC1.02□□□□□ -2.25
RAE1P78406 Y_RNA.629-201ENST00000411368 105 ntBASIC1.02□□□□□ -2.25
RAE1P78406 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.02□□□□□ -2.25
RAE1P78406 AC015818.7-201ENST00000428754 109 ntBASIC1.02□□□□□ -2.25
RAE1P78406 AC087499.7-201ENST00000441958 109 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
RAE1P78406 RNU6-1110P-201ENST00000516462 101 ntBASIC1.02□□□□□ -2.25
RAE1P78406 AL589743.1-201ENST00000551932 2712 ntBASIC1.02□□□□□ -2.25
RAE1P78406 MIR4676-201ENST00000583078 72 ntBASIC1.02□□□□□ -2.25
RAE1P78406 AC020891.4-201ENST00000605745 93 ntBASIC1.02□□□□□ -2.25
RAE1P78406 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
RAE1P78406 U6.90-201ENST00000614007 104 ntBASIC1.02□□□□□ -2.25
RAE1P78406 U6.70-201ENST00000620287 104 ntBASIC1.02□□□□□ -2.25
RAE1P78406 AL035470.1-201ENST00000622571 220 ntBASIC1.02□□□□□ -2.25
RAE1P78406 SNORD115-35-201ENST00000365122 82 ntBASIC1.01□□□□□ -2.25
RAE1P78406 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.01□□□□□ -2.25
RAE1P78406 U7.7-201ENST00000459276 60 ntBASIC1.01□□□□□ -2.25
RAE1P78406 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.01□□□□□ -2.25
RAE1P78406 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.01□□□□□ -2.25
RAE1P78406 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
RAE1P78406 MIR1255B1-201ENST00000636325 63 ntBASIC1.01□□□□□ -2.25
RAE1P78406 Y_RNA.281-201ENST00000364774 94 ntBASIC1□□□□□ -2.25
RAE1P78406 RNU6-53P-201ENST00000365367 106 ntBASIC1□□□□□ -2.25
RAE1P78406 Y_RNA.588-201ENST00000391254 102 ntBASIC1□□□□□ -2.25
RAE1P78406 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1□□□□□ -2.25
RAE1P78406 RPL39P34-201ENST00000477141 156 ntBASIC1□□□□□ -2.25
RAE1P78406 AC133485.1-201ENST00000567176 124 ntBASIC1□□□□□ -2.25
RAE1P78406 MIR4804-201ENST00000581683 73 ntBASIC1□□□□□ -2.25
RAE1P78406 AL162726.3-218ENST00000636401 95 ntBASIC1□□□□□ -2.25
RAE1P78406 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1□□□□□ -2.25
RAE1P78406 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1□□□□□ -2.25
RAE1P78406 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
RAE1P78406 Y_RNA.35-201ENST00000362601 101 ntBASIC0.99□□□□□ -2.25
RAE1P78406 Y_RNA.448-201ENST00000384185 108 ntBASIC0.99□□□□□ -2.25
RAE1P78406 Y_RNA.549-201ENST00000384657 102 ntBASIC0.99□□□□□ -2.25
RAE1P78406 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
RAE1P78406 RNU6-1321P-201ENST00000390905 107 ntBASIC0.99□□□□□ -2.25
RAE1P78406 RNU6-1307P-201ENST00000391012 103 ntBASIC0.99□□□□□ -2.25
RAE1P78406 MIR938-201ENST00000401216 83 ntBASIC0.99□□□□□ -2.25
RAE1P78406 MIR1912-201ENST00000410389 80 ntBASIC0.99□□□□□ -2.25
RAE1P78406 RNU4-83P-201ENST00000410863 133 ntBASIC0.99□□□□□ -2.25
RAE1P78406 TRMT112P2-201ENST00000512910 132 ntBASIC0.99□□□□□ -2.25
RAE1P78406 RNU6-977P-201ENST00000516411 103 ntBASIC0.99□□□□□ -2.25
RAE1P78406 AC105081.1-201ENST00000617727 106 ntBASIC0.99□□□□□ -2.25
RAE1P78406 RNU6-363P-201ENST00000362895 105 ntBASIC0.98□□□□□ -2.25
RAE1P78406 Y_RNA.85-201ENST00000363014 111 ntBASIC0.98□□□□□ -2.25
RAE1P78406 RNU4-67P-201ENST00000364569 141 ntBASIC0.98□□□□□ -2.25
RAE1P78406 RNY1P2-201ENST00000364820 117 ntBASIC0.98□□□□□ -2.25
RAE1P78406 Y_RNA.309-201ENST00000365046 111 ntBASIC0.98□□□□□ -2.25
RAE1P78406 Y_RNA.507-201ENST00000384500 99 ntBASIC0.98□□□□□ -2.25
RAE1P78406 RNU6-429P-201ENST00000384582 108 ntBASIC0.98□□□□□ -2.25
RAE1P78406 RNU6-816P-201ENST00000390914 107 ntBASIC0.98□□□□□ -2.25
RAE1P78406 SNORD89-201ENST00000390981 114 ntBASIC0.98□□□□□ -2.25
RAE1P78406 RNU6-1268P-201ENST00000391214 107 ntBASIC0.98□□□□□ -2.25
RAE1P78406 RNU6-1239P-201ENST00000391310 107 ntBASIC0.98□□□□□ -2.25
RAE1P78406 RNU7-48P-201ENST00000458875 63 ntBASIC0.98□□□□□ -2.25
RAE1P78406 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
RAE1P78406 PDCD5P2-201ENST00000507570 312 ntBASIC0.98□□□□□ -2.25
RAE1P78406 RNA5SP255-201ENST00000516370 107 ntBASIC0.98□□□□□ -2.25
RAE1P78406 MIR4491-201ENST00000581087 68 ntBASIC0.98□□□□□ -2.25
RAE1P78406 SNORD92-201ENST00000585078 85 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 258.2 ms