Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SNORA25.1-201ENST00000362326 128 ntBASIC-0.82□□□□□ -2.54
ACTBP60709 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.82□□□□□ -2.54
ACTBP60709 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.82□□□□□ -2.54
ACTBP60709 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.82□□□□□ -2.54
ACTBP60709 RNU4-16P-201ENST00000364737 141 ntBASIC-0.82□□□□□ -2.54
ACTBP60709 MT-TT-201ENST00000387460 66 ntBASIC-0.82□□□□□ -2.54
ACTBP60709 SNORA53-201ENST00000391141 249 ntBASIC-0.82□□□□□ -2.54
ACTBP60709 TRAJ51-201ENST00000504127 63 ntBASIC-0.82□□□□□ -2.54
ACTBP60709 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.82□□□□□ -2.54
ACTBP60709 RNU7-70P-201ENST00000516941 66 ntBASIC-0.82□□□□□ -2.54
ACTBP60709 RNU7-188P-201ENST00000517063 64 ntBASIC-0.82□□□□□ -2.54
ACTBP60709 SNORD114-10-201ENST00000363409 72 ntBASIC-0.83□□□□□ -2.54
ACTBP60709 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.83□□□□□ -2.54
ACTBP60709 AL603914.1-201ENST00000401964 204 ntBASIC-0.83□□□□□ -2.54
ACTBP60709 MIR1302-11-201ENST00000408051 138 ntBASIC-0.83□□□□□ -2.54
ACTBP60709 MIR1302-9-201ENST00000408365 138 ntBASIC-0.83□□□□□ -2.54
ACTBP60709 MIR1302-10-201ENST00000408734 138 ntBASIC-0.83□□□□□ -2.54
ACTBP60709 RNA5SP144-201ENST00000410846 116 ntBASIC-0.83□□□□□ -2.54
ACTBP60709 RNU6-976P-201ENST00000516086 111 ntBASIC-0.83□□□□□ -2.54
ACTBP60709 MIR3681-201ENST00000580089 72 ntBASIC-0.83□□□□□ -2.54
ACTBP60709 AL359881.1-201ENST00000602916 267 ntBASIC-0.83□□□□□ -2.54
ACTBP60709 MIR1302-2-201ENST00000607096 138 ntBASIC-0.83□□□□□ -2.54
ACTBP60709 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.84□□□□□ -2.54
ACTBP60709 SNORA63.7-201ENST00000365579 123 ntBASIC-0.84□□□□□ -2.54
ACTBP60709 MIR519A1-201ENST00000385257 85 ntBASIC-0.84□□□□□ -2.54
ACTBP60709 MIR616-201ENST00000385293 97 ntBASIC-0.84□□□□□ -2.54
ACTBP60709 AL606845.1-201ENST00000404881 255 ntBASIC-0.84□□□□□ -2.54
ACTBP60709 MTATP6P23-201ENST00000440153 476 ntBASIC-0.84□□□□□ -2.54
ACTBP60709 RNU7-74P-201ENST00000459104 62 ntBASIC-0.84□□□□□ -2.54
ACTBP60709 SNORD67.1-201ENST00000516618 108 ntBASIC-0.84□□□□□ -2.54
ACTBP60709 RNU6-175P-201ENST00000516896 107 ntBASIC-0.84□□□□□ -2.54
ACTBP60709 RNU6-570P-201ENST00000517051 105 ntBASIC-0.84□□□□□ -2.54
ACTBP60709 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.84□□□□□ -2.54
ACTBP60709 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.85□□□□□ -2.55
ACTBP60709 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.85□□□□□ -2.55
ACTBP60709 RNU1-141P-201ENST00000364623 158 ntBASIC-0.85□□□□□ -2.55
ACTBP60709 RNU6-211P-201ENST00000384047 107 ntBASIC-0.85□□□□□ -2.55
ACTBP60709 MIR9-2-201ENST00000384838 87 ntBASIC-0.85□□□□□ -2.55
ACTBP60709 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.85□□□□□ -2.55
ACTBP60709 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.85□□□□□ -2.55
ACTBP60709 AP001328.1-201ENST00000528550 176 ntBASIC-0.85□□□□□ -2.55
ACTBP60709 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.86□□□□□ -2.55
ACTBP60709 RNU6-455P-201ENST00000384681 107 ntBASIC-0.86□□□□□ -2.55
ACTBP60709 RNU6-121P-201ENST00000410525 99 ntBASIC-0.86□□□□□ -2.55
ACTBP60709 AC037487.3-201ENST00000606668 112 ntBASIC-0.86□□□□□ -2.55
ACTBP60709 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.86□□□□□ -2.55
ACTBP60709 AC112487.2-201ENST00000637950 304 ntBASIC-0.86□□□□□ -2.55
ACTBP60709 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.87□□□□□ -2.55
ACTBP60709 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.87□□□□□ -2.55
ACTBP60709 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.87□□□□□ -2.55
ACTBP60709 MIR181B2-201ENST00000385004 89 ntBASIC-0.87□□□□□ -2.55
ACTBP60709 RNU6-876P-201ENST00000391295 104 ntBASIC-0.87□□□□□ -2.55
ACTBP60709 RNU7-113P-201ENST00000459273 62 ntBASIC-0.87□□□□□ -2.55
ACTBP60709 RNU6-453P-201ENST00000516819 85 ntBASIC-0.87□□□□□ -2.55
ACTBP60709 MTND5P40-201ENST00000559945 246 ntBASIC-0.87□□□□□ -2.55
ACTBP60709 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.87□□□□□ -2.55
ACTBP60709 AC090574.1-201ENST00000623186 233 ntBASIC-0.87□□□□□ -2.55
ACTBP60709 AC093726.3-201ENST00000637588 150 ntBASIC-0.87□□□□□ -2.55
ACTBP60709 MIR409-201ENST00000362237 79 ntBASIC-0.88□□□□□ -2.55
ACTBP60709 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.88□□□□□ -2.55
ACTBP60709 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.88□□□□□ -2.55
ACTBP60709 RNU6-47P-201ENST00000383866 107 ntBASIC-0.88□□□□□ -2.55
ACTBP60709 SNORA32-201ENST00000384072 121 ntBASIC-0.88□□□□□ -2.55
ACTBP60709 RNY1P6-201ENST00000384193 109 ntBASIC-0.88□□□□□ -2.55
ACTBP60709 RNU4-43P-201ENST00000410628 137 ntBASIC-0.88□□□□□ -2.55
ACTBP60709 AC093423.1-201ENST00000440817 142 ntBASIC-0.88□□□□□ -2.55
ACTBP60709 RNU7-13P-201ENST00000516413 62 ntBASIC-0.88□□□□□ -2.55
ACTBP60709 RNA5SP33-201ENST00000516687 98 ntBASIC-0.88□□□□□ -2.55
ACTBP60709 MIR4280-201ENST00000582178 76 ntBASIC-0.88□□□□□ -2.55
ACTBP60709 AC069503.3-201ENST00000618674 145 ntBASIC-0.88□□□□□ -2.55
ACTBP60709 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.89□□□□□ -2.55
ACTBP60709 MIR539-201ENST00000365690 78 ntBASIC-0.89□□□□□ -2.55
ACTBP60709 SNORD56B-201ENST00000384713 71 ntBASIC-0.89□□□□□ -2.55
ACTBP60709 SNORD19B-201ENST00000459623 84 ntBASIC-0.89□□□□□ -2.55
ACTBP60709 AC082651.2-201ENST00000496833 166 ntBASIC-0.89□□□□□ -2.55
ACTBP60709 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.89□□□□□ -2.55
ACTBP60709 MIR4473-201ENST00000583731 91 ntBASIC-0.89□□□□□ -2.55
ACTBP60709 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.9□□□□□ -2.55
ACTBP60709 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.9□□□□□ -2.55
ACTBP60709 MIR624-201ENST00000385217 97 ntBASIC-0.9□□□□□ -2.55
ACTBP60709 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.9□□□□□ -2.55
ACTBP60709 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.9□□□□□ -2.55
ACTBP60709 AL132765.2-201ENST00000610812 351 ntBASIC-0.9□□□□□ -2.55
ACTBP60709 uc_338.10-201ENST00000621872 182 ntBASIC-0.9□□□□□ -2.55
ACTBP60709 MIR1302-1-201ENST00000637932 143 ntBASIC-0.9□□□□□ -2.55
ACTBP60709 RNU6-978P-201ENST00000364371 103 ntBASIC-0.91□□□□□ -2.56
ACTBP60709 MIR548I2-201ENST00000408348 149 ntBASIC-0.91□□□□□ -2.56
ACTBP60709 RNU6-561P-201ENST00000516222 102 ntBASIC-0.91□□□□□ -2.56
ACTBP60709 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.91□□□□□ -2.56
ACTBP60709 MIR548AE1-201ENST00000583292 70 ntBASIC-0.91□□□□□ -2.56
ACTBP60709 MIR548AE2-201ENST00000583456 67 ntBASIC-0.91□□□□□ -2.56
ACTBP60709 AC006504.6-201ENST00000590142 199 ntBASIC-0.91□□□□□ -2.56
ACTBP60709 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.91□□□□□ -2.56
ACTBP60709 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.91□□□□□ -2.56
ACTBP60709 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.92□□□□□ -2.56
ACTBP60709 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.92□□□□□ -2.56
ACTBP60709 SNORD114-29-201ENST00000364819 70 ntBASIC-0.92□□□□□ -2.56
ACTBP60709 SNORA79-201ENST00000408376 140 ntBASIC-0.92□□□□□ -2.56
ACTBP60709 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.92□□□□□ -2.56
ACTBP60709 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms