Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RNU6-1144P-201ENST00000384247 104 ntBASIC1.09□□□□□ -2.23
PMS2P54278 SNORA18-201ENST00000384416 132 ntBASIC1.09□□□□□ -2.23
PMS2P54278 RNU6-735P-201ENST00000410612 107 ntBASIC1.09□□□□□ -2.23
PMS2P54278 RPS29P1-201ENST00000465274 159 ntBASIC1.09□□□□□ -2.23
PMS2P54278 RNU7-79P-201ENST00000516082 62 ntBASIC1.09□□□□□ -2.23
PMS2P54278 SNORD33.1-201ENST00000516213 88 ntBASIC1.09□□□□□ -2.23
PMS2P54278 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
PMS2P54278 MIR151B-201ENST00000584249 96 ntBASIC1.09□□□□□ -2.23
PMS2P54278 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
PMS2P54278 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
PMS2P54278 AL662814.1-201ENST00000617364 121 ntBASIC1.09□□□□□ -2.23
PMS2P54278 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
PMS2P54278 MIR6515-201ENST00000619843 57 ntBASIC1.09□□□□□ -2.23
PMS2P54278 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.24
PMS2P54278 AC008163.1-202ENST00000636004 2889 ntBASIC1.08□□□□□ -2.24
PMS2P54278 MIR548A3-201ENST00000385297 97 ntBASIC1.08□□□□□ -2.24
PMS2P54278 RNU6-205P-201ENST00000390858 107 ntBASIC1.08□□□□□ -2.24
PMS2P54278 RNU6-1165P-201ENST00000410119 107 ntBASIC1.08□□□□□ -2.24
PMS2P54278 RNU6-1064P-201ENST00000410626 104 ntBASIC1.08□□□□□ -2.24
PMS2P54278 MIR18B-201ENST00000454574 71 ntBASIC1.08□□□□□ -2.24
PMS2P54278 RNU7-62P-201ENST00000458856 62 ntBASIC1.08□□□□□ -2.24
PMS2P54278 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
PMS2P54278 RNU6-1223P-201ENST00000517124 104 ntBASIC1.08□□□□□ -2.24
PMS2P54278 AC141846.1-201ENST00000568348 142 ntBASIC1.08□□□□□ -2.24
PMS2P54278 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.08□□□□□ -2.24
PMS2P54278 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
PMS2P54278 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
PMS2P54278 RNU6-1290P-201ENST00000362957 109 ntBASIC1.07□□□□□ -2.24
PMS2P54278 RNY1P13-201ENST00000365030 105 ntBASIC1.07□□□□□ -2.24
PMS2P54278 RNU6-476P-201ENST00000384726 107 ntBASIC1.07□□□□□ -2.24
PMS2P54278 MIR200A-201ENST00000384875 90 ntBASIC1.07□□□□□ -2.24
PMS2P54278 MIR548D2-201ENST00000384955 97 ntBASIC1.07□□□□□ -2.24
PMS2P54278 MT-TF-201ENST00000387314 71 ntBASIC1.07□□□□□ -2.24
PMS2P54278 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
PMS2P54278 MIR6788-201ENST00000618842 66 ntBASIC1.07□□□□□ -2.24
PMS2P54278 MIR6767-201ENST00000637302 66 ntBASIC1.07□□□□□ -2.24
PMS2P54278 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
PMS2P54278 RNU6-1187P-201ENST00000364771 110 ntBASIC1.06□□□□□ -2.24
PMS2P54278 Y_RNA.330-201ENST00000365230 109 ntBASIC1.06□□□□□ -2.24
PMS2P54278 RNU6-1056P-201ENST00000383996 107 ntBASIC1.06□□□□□ -2.24
PMS2P54278 RNU6-949P-201ENST00000384040 107 ntBASIC1.06□□□□□ -2.24
PMS2P54278 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.06□□□□□ -2.24
PMS2P54278 RNA5SP95-201ENST00000410319 137 ntBASIC1.06□□□□□ -2.24
PMS2P54278 RNU7-6P-201ENST00000516845 62 ntBASIC1.06□□□□□ -2.24
PMS2P54278 AC007012.1-201ENST00000567192 175 ntBASIC1.06□□□□□ -2.24
PMS2P54278 uc_338.6-201ENST00000613544 171 ntBASIC1.06□□□□□ -2.24
PMS2P54278 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
PMS2P54278 SNORD114-24-201ENST00000365029 72 ntBASIC1.05□□□□□ -2.24
PMS2P54278 SNORA2B-201ENST00000384583 137 ntBASIC1.05□□□□□ -2.24
PMS2P54278 SNORD77B-201ENST00000391112 67 ntBASIC1.05□□□□□ -2.24
PMS2P54278 RNA5SP237-201ENST00000410414 113 ntBASIC1.05□□□□□ -2.24
PMS2P54278 RPL39P34-201ENST00000477141 156 ntBASIC1.05□□□□□ -2.24
PMS2P54278 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.05□□□□□ -2.24
PMS2P54278 SNORD114-10-201ENST00000363409 72 ntBASIC1.04□□□□□ -2.24
PMS2P54278 Y_RNA.281-201ENST00000364774 94 ntBASIC1.04□□□□□ -2.24
PMS2P54278 Y_RNA.344-201ENST00000365381 112 ntBASIC1.04□□□□□ -2.24
PMS2P54278 SNORA32-201ENST00000384072 121 ntBASIC1.04□□□□□ -2.24
PMS2P54278 SNORD116-21-201ENST00000384507 92 ntBASIC1.04□□□□□ -2.24
PMS2P54278 RNU6-1237P-201ENST00000384777 107 ntBASIC1.04□□□□□ -2.24
PMS2P54278 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.04□□□□□ -2.24
PMS2P54278 MIR548J-201ENST00000408833 112 ntBASIC1.04□□□□□ -2.24
PMS2P54278 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.04□□□□□ -2.24
PMS2P54278 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
PMS2P54278 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.04□□□□□ -2.24
PMS2P54278 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PMS2P54278 Y_RNA.362-201ENST00000365518 110 ntBASIC1.03□□□□□ -2.24
PMS2P54278 RNU6-880P-201ENST00000384526 107 ntBASIC1.03□□□□□ -2.24
PMS2P54278 RNU6-429P-201ENST00000384582 108 ntBASIC1.03□□□□□ -2.24
PMS2P54278 MIR548A1-201ENST00000385041 97 ntBASIC1.03□□□□□ -2.24
PMS2P54278 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.03□□□□□ -2.24
PMS2P54278 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.03□□□□□ -2.24
PMS2P54278 FAM71BP1-201ENST00000604431 523 ntBASIC1.03□□□□□ -2.24
PMS2P54278 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
PMS2P54278 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-616P-201ENST00000384353 107 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-447P-201ENST00000410293 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-1118P-201ENST00000410382 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-1076P-201ENST00000410397 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-355P-201ENST00000410427 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-791P-201ENST00000410467 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-705P-201ENST00000410601 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-1100P-201ENST00000410691 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-860P-201ENST00000410860 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-1217P-201ENST00000411276 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-785P-201ENST00000411324 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 AC096949.1-201ENST00000412047 152 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-589P-201ENST00000516485 107 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU7-137P-201ENST00000516788 62 ntBASIC1.02□□□□□ -2.25
PMS2P54278 AC023827.1-201ENST00000569247 97 ntBASIC1.02□□□□□ -2.25
PMS2P54278 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
PMS2P54278 Y_RNA.773-201ENST00000607168 90 ntBASIC1.02□□□□□ -2.25
PMS2P54278 U6.90-201ENST00000614007 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 U6.70-201ENST00000620287 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 Y_RNA.35-201ENST00000362601 101 ntBASIC1.01□□□□□ -2.25
PMS2P54278 RNU6-363P-201ENST00000362895 105 ntBASIC1.01□□□□□ -2.25
PMS2P54278 Y_RNA.85-201ENST00000363014 111 ntBASIC1.01□□□□□ -2.25
PMS2P54278 SNORD115-35-201ENST00000365122 82 ntBASIC1.01□□□□□ -2.25
PMS2P54278 RNU6-934P-201ENST00000365154 107 ntBASIC1.01□□□□□ -2.25
PMS2P54278 U8.15-201ENST00000390947 134 ntBASIC1.01□□□□□ -2.25
PMS2P54278 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms