Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RNU6-1144P-201ENST00000384247 104 ntBASIC1.09□□□□□ -2.23
PMS2P54278 SNORA18-201ENST00000384416 132 ntBASIC1.09□□□□□ -2.23
PMS2P54278 RNU6-735P-201ENST00000410612 107 ntBASIC1.09□□□□□ -2.23
PMS2P54278 RPS29P1-201ENST00000465274 159 ntBASIC1.09□□□□□ -2.23
PMS2P54278 RNU7-79P-201ENST00000516082 62 ntBASIC1.09□□□□□ -2.23
PMS2P54278 SNORD33.1-201ENST00000516213 88 ntBASIC1.09□□□□□ -2.23
PMS2P54278 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
PMS2P54278 MIR151B-201ENST00000584249 96 ntBASIC1.09□□□□□ -2.23
PMS2P54278 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
PMS2P54278 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
PMS2P54278 AL662814.1-201ENST00000617364 121 ntBASIC1.09□□□□□ -2.23
PMS2P54278 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
PMS2P54278 MIR6515-201ENST00000619843 57 ntBASIC1.09□□□□□ -2.23
PMS2P54278 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.24
PMS2P54278 AC008163.1-202ENST00000636004 2889 ntBASIC1.08□□□□□ -2.24
PMS2P54278 MIR548A3-201ENST00000385297 97 ntBASIC1.08□□□□□ -2.24
PMS2P54278 RNU6-205P-201ENST00000390858 107 ntBASIC1.08□□□□□ -2.24
PMS2P54278 RNU6-1165P-201ENST00000410119 107 ntBASIC1.08□□□□□ -2.24
PMS2P54278 RNU6-1064P-201ENST00000410626 104 ntBASIC1.08□□□□□ -2.24
PMS2P54278 MIR18B-201ENST00000454574 71 ntBASIC1.08□□□□□ -2.24
PMS2P54278 RNU7-62P-201ENST00000458856 62 ntBASIC1.08□□□□□ -2.24
PMS2P54278 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
PMS2P54278 RNU6-1223P-201ENST00000517124 104 ntBASIC1.08□□□□□ -2.24
PMS2P54278 AC141846.1-201ENST00000568348 142 ntBASIC1.08□□□□□ -2.24
PMS2P54278 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.08□□□□□ -2.24
PMS2P54278 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
PMS2P54278 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
PMS2P54278 RNU6-1290P-201ENST00000362957 109 ntBASIC1.07□□□□□ -2.24
PMS2P54278 RNY1P13-201ENST00000365030 105 ntBASIC1.07□□□□□ -2.24
PMS2P54278 RNU6-476P-201ENST00000384726 107 ntBASIC1.07□□□□□ -2.24
PMS2P54278 MIR200A-201ENST00000384875 90 ntBASIC1.07□□□□□ -2.24
PMS2P54278 MIR548D2-201ENST00000384955 97 ntBASIC1.07□□□□□ -2.24
PMS2P54278 MT-TF-201ENST00000387314 71 ntBASIC1.07□□□□□ -2.24
PMS2P54278 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
PMS2P54278 MIR6788-201ENST00000618842 66 ntBASIC1.07□□□□□ -2.24
PMS2P54278 MIR6767-201ENST00000637302 66 ntBASIC1.07□□□□□ -2.24
PMS2P54278 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
PMS2P54278 RNU6-1187P-201ENST00000364771 110 ntBASIC1.06□□□□□ -2.24
PMS2P54278 Y_RNA.330-201ENST00000365230 109 ntBASIC1.06□□□□□ -2.24
PMS2P54278 RNU6-1056P-201ENST00000383996 107 ntBASIC1.06□□□□□ -2.24
PMS2P54278 RNU6-949P-201ENST00000384040 107 ntBASIC1.06□□□□□ -2.24
PMS2P54278 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.06□□□□□ -2.24
PMS2P54278 RNA5SP95-201ENST00000410319 137 ntBASIC1.06□□□□□ -2.24
PMS2P54278 RNU7-6P-201ENST00000516845 62 ntBASIC1.06□□□□□ -2.24
PMS2P54278 AC007012.1-201ENST00000567192 175 ntBASIC1.06□□□□□ -2.24
PMS2P54278 uc_338.6-201ENST00000613544 171 ntBASIC1.06□□□□□ -2.24
PMS2P54278 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
PMS2P54278 SNORD114-24-201ENST00000365029 72 ntBASIC1.05□□□□□ -2.24
PMS2P54278 SNORA2B-201ENST00000384583 137 ntBASIC1.05□□□□□ -2.24
PMS2P54278 SNORD77B-201ENST00000391112 67 ntBASIC1.05□□□□□ -2.24
PMS2P54278 RNA5SP237-201ENST00000410414 113 ntBASIC1.05□□□□□ -2.24
PMS2P54278 RPL39P34-201ENST00000477141 156 ntBASIC1.05□□□□□ -2.24
PMS2P54278 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.05□□□□□ -2.24
PMS2P54278 SNORD114-10-201ENST00000363409 72 ntBASIC1.04□□□□□ -2.24
PMS2P54278 Y_RNA.281-201ENST00000364774 94 ntBASIC1.04□□□□□ -2.24
PMS2P54278 Y_RNA.344-201ENST00000365381 112 ntBASIC1.04□□□□□ -2.24
PMS2P54278 SNORA32-201ENST00000384072 121 ntBASIC1.04□□□□□ -2.24
PMS2P54278 SNORD116-21-201ENST00000384507 92 ntBASIC1.04□□□□□ -2.24
PMS2P54278 RNU6-1237P-201ENST00000384777 107 ntBASIC1.04□□□□□ -2.24
PMS2P54278 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.04□□□□□ -2.24
PMS2P54278 MIR548J-201ENST00000408833 112 ntBASIC1.04□□□□□ -2.24
PMS2P54278 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.04□□□□□ -2.24
PMS2P54278 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
PMS2P54278 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.04□□□□□ -2.24
PMS2P54278 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PMS2P54278 Y_RNA.362-201ENST00000365518 110 ntBASIC1.03□□□□□ -2.24
PMS2P54278 RNU6-880P-201ENST00000384526 107 ntBASIC1.03□□□□□ -2.24
PMS2P54278 RNU6-429P-201ENST00000384582 108 ntBASIC1.03□□□□□ -2.24
PMS2P54278 MIR548A1-201ENST00000385041 97 ntBASIC1.03□□□□□ -2.24
PMS2P54278 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.03□□□□□ -2.24
PMS2P54278 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.03□□□□□ -2.24
PMS2P54278 FAM71BP1-201ENST00000604431 523 ntBASIC1.03□□□□□ -2.24
PMS2P54278 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
PMS2P54278 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-616P-201ENST00000384353 107 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-447P-201ENST00000410293 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-1118P-201ENST00000410382 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-1076P-201ENST00000410397 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-355P-201ENST00000410427 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-791P-201ENST00000410467 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-705P-201ENST00000410601 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-1100P-201ENST00000410691 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-860P-201ENST00000410860 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-1217P-201ENST00000411276 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-785P-201ENST00000411324 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 AC096949.1-201ENST00000412047 152 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU6-589P-201ENST00000516485 107 ntBASIC1.02□□□□□ -2.25
PMS2P54278 RNU7-137P-201ENST00000516788 62 ntBASIC1.02□□□□□ -2.25
PMS2P54278 AC023827.1-201ENST00000569247 97 ntBASIC1.02□□□□□ -2.25
PMS2P54278 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
PMS2P54278 Y_RNA.773-201ENST00000607168 90 ntBASIC1.02□□□□□ -2.25
PMS2P54278 U6.90-201ENST00000614007 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 U6.70-201ENST00000620287 104 ntBASIC1.02□□□□□ -2.25
PMS2P54278 Y_RNA.35-201ENST00000362601 101 ntBASIC1.01□□□□□ -2.25
PMS2P54278 RNU6-363P-201ENST00000362895 105 ntBASIC1.01□□□□□ -2.25
PMS2P54278 Y_RNA.85-201ENST00000363014 111 ntBASIC1.01□□□□□ -2.25
PMS2P54278 SNORD115-35-201ENST00000365122 82 ntBASIC1.01□□□□□ -2.25
PMS2P54278 RNU6-934P-201ENST00000365154 107 ntBASIC1.01□□□□□ -2.25
PMS2P54278 U8.15-201ENST00000390947 134 ntBASIC1.01□□□□□ -2.25
PMS2P54278 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 246.2 ms