Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.32□□□□□ -2.62
NUP98P52948 RNU6-154P-201ENST00000384306 106 ntBASIC-1.32□□□□□ -2.62
NUP98P52948 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.32□□□□□ -2.62
NUP98P52948 MIR519E-201ENST00000385075 84 ntBASIC-1.32□□□□□ -2.62
NUP98P52948 SNORA53-201ENST00000391141 249 ntBASIC-1.32□□□□□ -2.62
NUP98P52948 MIR548K-201ENST00000408406 116 ntBASIC-1.32□□□□□ -2.62
NUP98P52948 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.32□□□□□ -2.62
NUP98P52948 RNU6-732P-201ENST00000516033 103 ntBASIC-1.32□□□□□ -2.62
NUP98P52948 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.32□□□□□ -2.62
NUP98P52948 AC145350.1-201ENST00000567426 208 ntBASIC-1.32□□□□□ -2.62
NUP98P52948 MIR6841-201ENST00000637129 72 ntBASIC-1.32□□□□□ -2.62
NUP98P52948 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 AL603914.1-201ENST00000401964 204 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.33□□□□□ -2.62
NUP98P52948 RNU7-113P-201ENST00000459273 62 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 MRPS35P2-201ENST00000508242 191 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 AL442663.2-201ENST00000554385 511 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.33□□□□□ -2.62
NUP98P52948 VN1R91P-201ENST00000594377 169 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 AC098479.1-201ENST00000609225 154 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.33□□□□□ -2.62
NUP98P52948 RNU6-880P-201ENST00000384526 107 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 SNRPGP8-201ENST00000454064 226 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 RNU7-4P-201ENST00000516961 62 ntBASIC-1.33□□□□□ -2.62
NUP98P52948 SNORD63-201ENST00000384262 68 ntBASIC-1.34□□□□□ -2.62
NUP98P52948 MIR548I2-201ENST00000408348 149 ntBASIC-1.34□□□□□ -2.62
NUP98P52948 U8.20-201ENST00000459445 131 ntBASIC-1.34□□□□□ -2.62
NUP98P52948 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.34□□□□□ -2.62
NUP98P52948 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.34□□□□□ -2.62
NUP98P52948 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.34□□□□□ -2.62
NUP98P52948 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.34□□□□□ -2.62
NUP98P52948 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.35□□□□□ -2.63
NUP98P52948 RNY4P7-201ENST00000364600 96 ntBASIC-1.35□□□□□ -2.63
NUP98P52948 MIR548F5-201ENST00000408421 86 ntBASIC-1.35□□□□□ -2.63
NUP98P52948 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.35□□□□□ -2.63
NUP98P52948 RNU6-120P-201ENST00000516077 103 ntBASIC-1.35□□□□□ -2.63
NUP98P52948 RNA5SP153-201ENST00000516498 76 ntBASIC-1.35□□□□□ -2.63
NUP98P52948 AC109635.3-201ENST00000529536 185 ntBASIC-1.35□□□□□ -2.63
NUP98P52948 AC024909.2-201ENST00000553035 286 ntBASIC-1.35□□□□□ -2.63
NUP98P52948 AC132825.6-201ENST00000638861 357 ntBASIC-1.35□□□□□ -2.63
NUP98P52948 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
NUP98P52948 MT-TT-201ENST00000387460 66 ntBASIC-1.36□□□□□ -2.63
NUP98P52948 AC022028.1-201ENST00000412054 408 ntBASIC-1.36□□□□□ -2.63
NUP98P52948 AC098614.3-201ENST00000438957 440 ntBASIC-1.36□□□□□ -2.63
NUP98P52948 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.37□□□□□ -2.63
NUP98P52948 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.37□□□□□ -2.63
NUP98P52948 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.37□□□□□ -2.63
NUP98P52948 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.37□□□□□ -2.63
NUP98P52948 AC244090.1-201ENST00000441884 93 ntBASIC-1.37□□□□□ -2.63
NUP98P52948 MIR3129-201ENST00000581095 76 ntBASIC-1.37□□□□□ -2.63
NUP98P52948 AL353803.5-201ENST00000599815 141 ntBASIC-1.37□□□□□ -2.63
NUP98P52948 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 RNY3P11-201ENST00000364153 102 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 RNU6-983P-201ENST00000516004 103 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 AC007012.1-201ENST00000567192 175 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 MIR4520-1-201ENST00000582609 70 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 YWHAEP3-201ENST00000582767 121 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 MIR181A1-201ENST00000385026 110 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 AC099799.1-201ENST00000439809 192 ntBASIC-1.38□□□□□ -2.63
NUP98P52948 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.39□□□□□ -2.63
NUP98P52948 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.39□□□□□ -2.63
NUP98P52948 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.39□□□□□ -2.63
NUP98P52948 RNU6-479P-201ENST00000516348 105 ntBASIC-1.39□□□□□ -2.63
NUP98P52948 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.39□□□□□ -2.63
NUP98P52948 MIR4460-201ENST00000577862 86 ntBASIC-1.39□□□□□ -2.63
NUP98P52948 MIR5197-201ENST00000583721 112 ntBASIC-1.39□□□□□ -2.63
NUP98P52948 MIR5690-201ENST00000583739 73 ntBASIC-1.39□□□□□ -2.63
NUP98P52948 AC006504.6-201ENST00000590142 199 ntBASIC-1.39□□□□□ -2.63
NUP98P52948 AC097639.2-201ENST00000603159 172 ntBASIC-1.39□□□□□ -2.63
NUP98P52948 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 SNORD115-20-201ENST00000365099 82 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 RNU7-48P-201ENST00000458875 63 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 RNU6-506P-201ENST00000516553 94 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 AL445584.3-201ENST00000617173 78 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 AC048344.4-201ENST00000619744 527 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 SNORD114-17-201ENST00000364699 75 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 RNU7-195P-201ENST00000458793 62 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 snoU13.13-201ENST00000458842 104 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 MIR3611-201ENST00000584484 83 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 C8orf59P2-201ENST00000603441 271 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 AL121655.1-201ENST00000605811 308 ntBASIC-1.4□□□□□ -2.63
NUP98P52948 RNU6-973P-201ENST00000364690 107 ntBASIC-1.41□□□□□ -2.64
NUP98P52948 RNU6-507P-201ENST00000516045 100 ntBASIC-1.41□□□□□ -2.64
NUP98P52948 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.41□□□□□ -2.64
NUP98P52948 MIR5704-201ENST00000584029 77 ntBASIC-1.41□□□□□ -2.64
NUP98P52948 AL008718.3-201ENST00000610217 321 ntBASIC-1.41□□□□□ -2.64
NUP98P52948 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.41□□□□□ -2.64
NUP98P52948 MIR367-201ENST00000362299 68 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms