Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MIR4679-2-201ENST00000578358 77 ntBASIC1.02□□□□□ -2.25
CLCN3P51790 AC106800.4-201ENST00000614905 153 ntBASIC1.02□□□□□ -2.25
CLCN3P51790 AL662814.1-201ENST00000617364 121 ntBASIC1.02□□□□□ -2.25
CLCN3P51790 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
CLCN3P51790 Y_RNA.273-201ENST00000364703 102 ntBASIC1.01□□□□□ -2.25
CLCN3P51790 Y_RNA.299-201ENST00000364973 94 ntBASIC1.01□□□□□ -2.25
CLCN3P51790 Y_RNA.330-201ENST00000365230 109 ntBASIC1.01□□□□□ -2.25
CLCN3P51790 MIR588-201ENST00000384900 83 ntBASIC1.01□□□□□ -2.25
CLCN3P51790 MIR489-201ENST00000384923 84 ntBASIC1.01□□□□□ -2.25
CLCN3P51790 RNU4-69P-201ENST00000410677 143 ntBASIC1.01□□□□□ -2.25
CLCN3P51790 AC096949.1-201ENST00000412047 152 ntBASIC1.01□□□□□ -2.25
CLCN3P51790 FABP5P4-201ENST00000437203 171 ntBASIC1.01□□□□□ -2.25
CLCN3P51790 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
CLCN3P51790 RNA5SP220-201ENST00000516298 104 ntBASIC1.01□□□□□ -2.25
CLCN3P51790 MIR151B-201ENST00000584249 96 ntBASIC1.01□□□□□ -2.25
CLCN3P51790 MIR6734-201ENST00000621166 68 ntBASIC1.01□□□□□ -2.25
CLCN3P51790 SNORD113.3-201ENST00000364630 78 ntBASIC1□□□□□ -2.25
CLCN3P51790 RNU6-1144P-201ENST00000384247 104 ntBASIC1□□□□□ -2.25
CLCN3P51790 SNORA18-201ENST00000384416 132 ntBASIC1□□□□□ -2.25
CLCN3P51790 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1□□□□□ -2.25
CLCN3P51790 snoU13.18-201ENST00000459483 104 ntBASIC1□□□□□ -2.25
CLCN3P51790 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1□□□□□ -2.25
CLCN3P51790 RNA5SP33-201ENST00000516687 98 ntBASIC1□□□□□ -2.25
CLCN3P51790 AC141846.1-201ENST00000568348 142 ntBASIC1□□□□□ -2.25
CLCN3P51790 MIR4661-201ENST00000582720 75 ntBASIC1□□□□□ -2.25
CLCN3P51790 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
CLCN3P51790 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CLCN3P51790 RNU6-369P-201ENST00000362515 102 ntBASIC0.99□□□□□ -2.25
CLCN3P51790 Y_RNA.213-201ENST00000364178 111 ntBASIC0.99□□□□□ -2.25
CLCN3P51790 RNY1P13-201ENST00000365030 105 ntBASIC0.99□□□□□ -2.25
CLCN3P51790 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
CLCN3P51790 MIR548D2-201ENST00000384955 97 ntBASIC0.99□□□□□ -2.25
CLCN3P51790 RNU6-205P-201ENST00000390858 107 ntBASIC0.99□□□□□ -2.25
CLCN3P51790 RNU6-1165P-201ENST00000410119 107 ntBASIC0.99□□□□□ -2.25
CLCN3P51790 Y_RNA.629-201ENST00000411368 105 ntBASIC0.99□□□□□ -2.25
CLCN3P51790 RNU7-62P-201ENST00000458856 62 ntBASIC0.99□□□□□ -2.25
CLCN3P51790 MIR3163-201ENST00000581592 73 ntBASIC0.99□□□□□ -2.25
CLCN3P51790 AL670379.3-201ENST00000605040 251 ntBASIC0.99□□□□□ -2.25
CLCN3P51790 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
CLCN3P51790 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.99□□□□□ -2.25
CLCN3P51790 RNU6-1290P-201ENST00000362957 109 ntBASIC0.98□□□□□ -2.25
CLCN3P51790 Y_RNA.344-201ENST00000365381 112 ntBASIC0.98□□□□□ -2.25
CLCN3P51790 RNU6-42P-201ENST00000384165 107 ntBASIC0.98□□□□□ -2.25
CLCN3P51790 RNU6-429P-201ENST00000384582 108 ntBASIC0.98□□□□□ -2.25
CLCN3P51790 RNU6-476P-201ENST00000384726 107 ntBASIC0.98□□□□□ -2.25
CLCN3P51790 RNU6-1064P-201ENST00000410626 104 ntBASIC0.98□□□□□ -2.25
CLCN3P51790 Y_RNA.649-201ENST00000459077 103 ntBASIC0.98□□□□□ -2.25
CLCN3P51790 SNORD124-201ENST00000459577 104 ntBASIC0.98□□□□□ -2.25
CLCN3P51790 UBL5P1-201ENST00000507979 193 ntBASIC0.98□□□□□ -2.25
CLCN3P51790 AL359881.1-201ENST00000602916 267 ntBASIC0.98□□□□□ -2.25
CLCN3P51790 Y_RNA.773-201ENST00000607168 90 ntBASIC0.98□□□□□ -2.25
CLCN3P51790 Y_RNA.281-201ENST00000364774 94 ntBASIC0.97□□□□□ -2.25
CLCN3P51790 RNU6-949P-201ENST00000384040 107 ntBASIC0.97□□□□□ -2.25
CLCN3P51790 MT-TF-201ENST00000387314 71 ntBASIC0.97□□□□□ -2.25
CLCN3P51790 MIR18B-201ENST00000454574 71 ntBASIC0.97□□□□□ -2.25
CLCN3P51790 snoU13.21-201ENST00000459368 105 ntBASIC0.97□□□□□ -2.25
CLCN3P51790 RNU7-79P-201ENST00000516082 62 ntBASIC0.97□□□□□ -2.25
CLCN3P51790 RNU6-589P-201ENST00000516485 107 ntBASIC0.97□□□□□ -2.25
CLCN3P51790 AL035470.1-201ENST00000622571 220 ntBASIC0.97□□□□□ -2.25
CLCN3P51790 RNY4P6-201ENST00000363667 96 ntBASIC0.96□□□□□ -2.26
CLCN3P51790 Y_RNA.362-201ENST00000365518 110 ntBASIC0.96□□□□□ -2.26
CLCN3P51790 RNU7-137P-201ENST00000516788 62 ntBASIC0.96□□□□□ -2.26
CLCN3P51790 AC007012.1-201ENST00000567192 175 ntBASIC0.96□□□□□ -2.26
CLCN3P51790 AC023827.1-201ENST00000569247 97 ntBASIC0.96□□□□□ -2.26
CLCN3P51790 MIR548AI-201ENST00000579940 88 ntBASIC0.96□□□□□ -2.26
CLCN3P51790 FAM71BP1-201ENST00000604431 523 ntBASIC0.96□□□□□ -2.26
CLCN3P51790 AC022709.1-201ENST00000615967 87 ntBASIC0.96□□□□□ -2.26
CLCN3P51790 RNU6-215P-201ENST00000365169 102 ntBASIC0.95□□□□□ -2.26
CLCN3P51790 SNORA32-201ENST00000384072 121 ntBASIC0.95□□□□□ -2.26
CLCN3P51790 SNORA2B-201ENST00000384583 137 ntBASIC0.95□□□□□ -2.26
CLCN3P51790 Y_RNA.549-201ENST00000384657 102 ntBASIC0.95□□□□□ -2.26
CLCN3P51790 MIR548A3-201ENST00000385297 97 ntBASIC0.95□□□□□ -2.26
CLCN3P51790 MIR942-201ENST00000401111 86 ntBASIC0.95□□□□□ -2.26
CLCN3P51790 AL353813.1-201ENST00000440700 253 ntBASIC0.95□□□□□ -2.26
CLCN3P51790 RNU7-6P-201ENST00000516845 62 ntBASIC0.95□□□□□ -2.26
CLCN3P51790 RNU6-1223P-201ENST00000517124 104 ntBASIC0.95□□□□□ -2.26
CLCN3P51790 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.95□□□□□ -2.26
CLCN3P51790 Y_RNA.35-201ENST00000362601 101 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 SNORD114-10-201ENST00000363409 72 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 RNU6-1056P-201ENST00000383996 107 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 RNU6-616P-201ENST00000384353 107 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 MIR548A1-201ENST00000385041 97 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 U8.15-201ENST00000390947 134 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 RNU6-1307P-201ENST00000391012 103 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 AC067940.1-201ENST00000458411 300 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 U7.7-201ENST00000459276 60 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 PDCD5P2-201ENST00000507570 312 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 RNA5SP255-201ENST00000516370 107 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 CYP3A137P-201ENST00000562436 69 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.94□□□□□ -2.26
CLCN3P51790 MIR1255B1-201ENST00000636325 63 ntBASIC0.94□□□□□ -2.26
CLCN3P51790 SNORD116-21-201ENST00000384507 92 ntBASIC0.93□□□□□ -2.26
CLCN3P51790 RNU6-880P-201ENST00000384526 107 ntBASIC0.93□□□□□ -2.26
CLCN3P51790 RNU6-1237P-201ENST00000384777 107 ntBASIC0.93□□□□□ -2.26
CLCN3P51790 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CLCN3P51790 RPL39P34-201ENST00000477141 156 ntBASIC0.93□□□□□ -2.26
CLCN3P51790 RNU6-1110P-201ENST00000516462 101 ntBASIC0.93□□□□□ -2.26
CLCN3P51790 SNORD67.1-201ENST00000516618 108 ntBASIC0.93□□□□□ -2.26
CLCN3P51790 RNU6-94P-201ENST00000607728 107 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms