Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 SNRPGP12-201ENST00000449481 213 ntBASIC2.16□□□□□ -2.06
SOX18P35713 AC023790.1-201ENST00000482174 347 ntBASIC2.16□□□□□ -2.06
SOX18P35713 RN7SL274P-201ENST00000492268 272 ntBASIC2.16□□□□□ -2.06
SOX18P35713 SNORA77B-201ENST00000578179 125 ntBASIC2.16□□□□□ -2.06
SOX18P35713 MIR4648-201ENST00000580107 72 ntBASIC2.16□□□□□ -2.06
SOX18P35713 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
SOX18P35713 RNU6-482P-201ENST00000391068 107 ntBASIC2.15□□□□□ -2.07
SOX18P35713 AC108210.2-201ENST00000503681 201 ntBASIC2.15□□□□□ -2.07
SOX18P35713 RNU6-250P-201ENST00000516958 103 ntBASIC2.15□□□□□ -2.07
SOX18P35713 MIR4713-201ENST00000582691 75 ntBASIC2.15□□□□□ -2.07
SOX18P35713 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SOX18P35713 MIR103A2-201ENST00000362154 78 ntBASIC2.14□□□□□ -2.07
SOX18P35713 MIR30D-201ENST00000362283 70 ntBASIC2.14□□□□□ -2.07
SOX18P35713 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.14□□□□□ -2.07
SOX18P35713 AC019176.1-201ENST00000518519 225 ntBASIC2.14□□□□□ -2.07
SOX18P35713 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
SOX18P35713 RNU6-1296P-201ENST00000383879 107 ntBASIC2.13□□□□□ -2.07
SOX18P35713 MT-TN-201ENST00000387400 73 ntBASIC2.13□□□□□ -2.07
SOX18P35713 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SOX18P35713 RNA5SP95-201ENST00000410319 137 ntBASIC2.13□□□□□ -2.07
SOX18P35713 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.13□□□□□ -2.07
SOX18P35713 AL591806.2-201ENST00000433122 173 ntBASIC2.13□□□□□ -2.07
SOX18P35713 AC087499.7-201ENST00000441958 109 ntBASIC2.13□□□□□ -2.07
SOX18P35713 snoU13.25-201ENST00000458945 104 ntBASIC2.13□□□□□ -2.07
SOX18P35713 Y_RNA.676-201ENST00000516393 96 ntBASIC2.13□□□□□ -2.07
SOX18P35713 AC019288.1-201ENST00000557918 224 ntBASIC2.13□□□□□ -2.07
SOX18P35713 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
SOX18P35713 MIR6516-201ENST00000630554 81 ntBASIC2.13□□□□□ -2.07
SOX18P35713 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.13□□□□□ -2.07
SOX18P35713 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SOX18P35713 AL161722.3-201ENST00000605789 2983 ntBASIC2.13□□□□□ -2.07
SOX18P35713 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
SOX18P35713 RNU6-571P-201ENST00000384128 107 ntBASIC2.12□□□□□ -2.07
SOX18P35713 MT-TF-201ENST00000387314 71 ntBASIC2.12□□□□□ -2.07
SOX18P35713 AC245517.4-201ENST00000448601 281 ntBASIC2.12□□□□□ -2.07
SOX18P35713 AL133373.1-201ENST00000497098 94 ntBASIC2.12□□□□□ -2.07
SOX18P35713 MIR4299-201ENST00000577899 72 ntBASIC2.12□□□□□ -2.07
SOX18P35713 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.12□□□□□ -2.07
SOX18P35713 uc_338.6-201ENST00000613544 171 ntBASIC2.12□□□□□ -2.07
SOX18P35713 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SOX18P35713 RNU6-654P-201ENST00000364373 107 ntBASIC2.11□□□□□ -2.07
SOX18P35713 MIR1236-201ENST00000408340 102 ntBASIC2.11□□□□□ -2.07
SOX18P35713 AL356320.1-201ENST00000429616 163 ntBASIC2.11□□□□□ -2.07
SOX18P35713 SNORD4B-201ENST00000459083 72 ntBASIC2.11□□□□□ -2.07
SOX18P35713 RNA5SP82-201ENST00000516707 92 ntBASIC2.11□□□□□ -2.07
SOX18P35713 MIR4662A-201ENST00000637499 67 ntBASIC2.11□□□□□ -2.07
SOX18P35713 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SOX18P35713 RNU6-53P-201ENST00000365367 106 ntBASIC2.1□□□□□ -2.07
SOX18P35713 SNORA72.6-201ENST00000384520 129 ntBASIC2.1□□□□□ -2.07
SOX18P35713 MIR1185-1-201ENST00000408598 86 ntBASIC2.1□□□□□ -2.07
SOX18P35713 RN7SKP223-201ENST00000410582 62 ntBASIC2.1□□□□□ -2.07
SOX18P35713 AL603825.1-201ENST00000438481 80 ntBASIC2.1□□□□□ -2.07
SOX18P35713 snoU13.9-201ENST00000458927 103 ntBASIC2.1□□□□□ -2.07
SOX18P35713 RPL30P7-201ENST00000479312 323 ntBASIC2.1□□□□□ -2.07
SOX18P35713 RNU7-153P-201ENST00000516455 62 ntBASIC2.1□□□□□ -2.07
SOX18P35713 AL512598.1-201ENST00000610158 273 ntBASIC2.1□□□□□ -2.07
SOX18P35713 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
SOX18P35713 RNA5SP264-201ENST00000363115 107 ntBASIC2.09□□□□□ -2.07
SOX18P35713 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SOX18P35713 MIR1289-2-201ENST00000408360 111 ntBASIC2.09□□□□□ -2.07
SOX18P35713 SNORD93-201ENST00000408813 74 ntBASIC2.09□□□□□ -2.07
SOX18P35713 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.09□□□□□ -2.07
SOX18P35713 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.09□□□□□ -2.07
SOX18P35713 AC005908.1-201ENST00000468701 347 ntBASIC2.09□□□□□ -2.07
SOX18P35713 RNU6-548P-201ENST00000517083 115 ntBASIC2.09□□□□□ -2.07
SOX18P35713 MIR5002-201ENST00000584713 97 ntBASIC2.09□□□□□ -2.07
SOX18P35713 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
SOX18P35713 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
SOX18P35713 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.08□□□□□ -2.08
SOX18P35713 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
SOX18P35713 MIR764-201ENST00000390811 85 ntBASIC2.08□□□□□ -2.08
SOX18P35713 MIR889-201ENST00000401280 79 ntBASIC2.08□□□□□ -2.08
SOX18P35713 RNU6-531P-201ENST00000516694 104 ntBASIC2.08□□□□□ -2.08
SOX18P35713 RNU11-2P-201ENST00000516898 142 ntBASIC2.08□□□□□ -2.08
SOX18P35713 MIR4712-201ENST00000583750 82 ntBASIC2.08□□□□□ -2.08
SOX18P35713 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SOX18P35713 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
SOX18P35713 MIR377-201ENST00000362145 69 ntBASIC2.07□□□□□ -2.08
SOX18P35713 Y_RNA.94-201ENST00000363068 106 ntBASIC2.07□□□□□ -2.08
SOX18P35713 RNU6-403P-201ENST00000363163 104 ntBASIC2.07□□□□□ -2.08
SOX18P35713 RNU6-776P-201ENST00000364403 104 ntBASIC2.07□□□□□ -2.08
SOX18P35713 RNU6-1022P-201ENST00000365049 104 ntBASIC2.07□□□□□ -2.08
SOX18P35713 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.07□□□□□ -2.08
SOX18P35713 AC140658.3-201ENST00000567603 271 ntBASIC2.07□□□□□ -2.08
SOX18P35713 MIR3937-201ENST00000580135 106 ntBASIC2.07□□□□□ -2.08
SOX18P35713 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SOX18P35713 MIR516A2-201ENST00000384888 90 ntBASIC2.06□□□□□ -2.08
SOX18P35713 MIR516A1-201ENST00000385033 90 ntBASIC2.06□□□□□ -2.08
SOX18P35713 RNU7-85P-201ENST00000458851 63 ntBASIC2.06□□□□□ -2.08
SOX18P35713 Y_RNA.648-201ENST00000459455 110 ntBASIC2.06□□□□□ -2.08
SOX18P35713 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
SOX18P35713 AC079140.2-201ENST00000506193 142 ntBASIC2.06□□□□□ -2.08
SOX18P35713 SNORA25.16-201ENST00000516741 121 ntBASIC2.06□□□□□ -2.08
SOX18P35713 MIR4491-201ENST00000581087 68 ntBASIC2.06□□□□□ -2.08
SOX18P35713 MIR5694-201ENST00000581190 76 ntBASIC2.06□□□□□ -2.08
SOX18P35713 AC008163.1-202ENST00000636004 2889 ntBASIC2.06□□□□□ -2.08
SOX18P35713 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SOX18P35713 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SOX18P35713 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
SOX18P35713 RNU4-58P-201ENST00000363192 141 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 243.7 ms