Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
RARAP10276 RNU6-1296P-201ENST00000383879 107 ntBASIC2.27□□□□□ -2.05
RARAP10276 RNU6-524P-201ENST00000384270 107 ntBASIC2.27□□□□□ -2.05
RARAP10276 MIR519C-201ENST00000385053 87 ntBASIC2.27□□□□□ -2.05
RARAP10276 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RARAP10276 RNA5SP212-201ENST00000391223 107 ntBASIC2.27□□□□□ -2.05
RARAP10276 MIR1289-2-201ENST00000408360 111 ntBASIC2.27□□□□□ -2.05
RARAP10276 RNU4-53P-201ENST00000410828 140 ntBASIC2.27□□□□□ -2.05
RARAP10276 RNA5SP200-201ENST00000516360 103 ntBASIC2.27□□□□□ -2.05
RARAP10276 RNA5SP480-201ENST00000516840 109 ntBASIC2.27□□□□□ -2.05
RARAP10276 RNU6-250P-201ENST00000516958 103 ntBASIC2.27□□□□□ -2.05
RARAP10276 AC138749.4-201ENST00000563970 127 ntBASIC2.27□□□□□ -2.05
RARAP10276 SNORD53-201ENST00000579969 78 ntBASIC2.27□□□□□ -2.05
RARAP10276 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.27□□□□□ -2.05
RARAP10276 MIR6740-201ENST00000618268 113 ntBASIC2.27□□□□□ -2.05
RARAP10276 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.27□□□□□ -2.05
RARAP10276 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
RARAP10276 Y_RNA.168-201ENST00000363740 102 ntBASIC2.26□□□□□ -2.05
RARAP10276 HMGN2P38-201ENST00000423806 265 ntBASIC2.26□□□□□ -2.05
RARAP10276 RPS27P21-201ENST00000486977 252 ntBASIC2.26□□□□□ -2.05
RARAP10276 AC019288.1-201ENST00000557918 224 ntBASIC2.26□□□□□ -2.05
RARAP10276 AC015688.6-201ENST00000577737 104 ntBASIC2.26□□□□□ -2.05
RARAP10276 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
RARAP10276 AP000753.3-201ENST00000604083 169 ntBASIC2.26□□□□□ -2.05
RARAP10276 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RARAP10276 MIR337-201ENST00000362281 93 ntBASIC2.25□□□□□ -2.05
RARAP10276 SNORA25.3-201ENST00000363205 127 ntBASIC2.25□□□□□ -2.05
RARAP10276 MIR499A-201ENST00000384903 122 ntBASIC2.25□□□□□ -2.05
RARAP10276 SNORA48.3-201ENST00000391081 134 ntBASIC2.25□□□□□ -2.05
RARAP10276 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.25□□□□□ -2.05
RARAP10276 SNRPGP12-201ENST00000449481 213 ntBASIC2.25□□□□□ -2.05
RARAP10276 HSPE1P24-201ENST00000450782 238 ntBASIC2.25□□□□□ -2.05
RARAP10276 GHRLOS.1-201ENST00000610995 70 ntBASIC2.25□□□□□ -2.05
RARAP10276 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RARAP10276 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RARAP10276 RNU6-396P-201ENST00000365369 105 ntBASIC2.24□□□□□ -2.05
RARAP10276 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RARAP10276 RNU6-519P-201ENST00000410590 108 ntBASIC2.24□□□□□ -2.05
RARAP10276 RNU4-83P-201ENST00000410863 133 ntBASIC2.24□□□□□ -2.05
RARAP10276 AC087499.7-201ENST00000441958 109 ntBASIC2.24□□□□□ -2.05
RARAP10276 snoU13.25-201ENST00000458945 104 ntBASIC2.24□□□□□ -2.05
RARAP10276 SNORA77B-201ENST00000578179 125 ntBASIC2.24□□□□□ -2.05
RARAP10276 MIR4264-201ENST00000583520 66 ntBASIC2.24□□□□□ -2.05
RARAP10276 SNORA4-201ENST00000584302 138 ntBASIC2.24□□□□□ -2.05
RARAP10276 MIR4448-201ENST00000584360 86 ntBASIC2.24□□□□□ -2.05
RARAP10276 U6.109-201ENST00000636749 87 ntBASIC2.24□□□□□ -2.05
RARAP10276 MIR30D-201ENST00000362283 70 ntBASIC2.23□□□□□ -2.05
RARAP10276 RNA5SP160-201ENST00000364866 120 ntBASIC2.23□□□□□ -2.05
RARAP10276 RNU4-52P-201ENST00000384209 138 ntBASIC2.23□□□□□ -2.05
RARAP10276 AC093729.1-201ENST00000513074 128 ntBASIC2.23□□□□□ -2.05
RARAP10276 MIR4500-201ENST00000579472 76 ntBASIC2.23□□□□□ -2.05
RARAP10276 MIR8066-201ENST00000617280 78 ntBASIC2.23□□□□□ -2.05
RARAP10276 MIR6132-201ENST00000622083 109 ntBASIC2.23□□□□□ -2.05
RARAP10276 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RARAP10276 Y_RNA.57-201ENST00000362806 113 ntBASIC2.22□□□□□ -2.05
RARAP10276 Y_RNA.94-201ENST00000363068 106 ntBASIC2.22□□□□□ -2.05
RARAP10276 SNORA16B-201ENST00000364674 135 ntBASIC2.22□□□□□ -2.05
RARAP10276 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RARAP10276 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.22□□□□□ -2.05
RARAP10276 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.22□□□□□ -2.05
RARAP10276 AL773524.1-201ENST00000614065 229 ntBASIC2.22□□□□□ -2.05
RARAP10276 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
RARAP10276 MT-TN-201ENST00000387400 73 ntBASIC2.21□□□□□ -2.06
RARAP10276 RNU6-1165P-201ENST00000410119 107 ntBASIC2.21□□□□□ -2.06
RARAP10276 AC244636.1-201ENST00000421152 228 ntBASIC2.21□□□□□ -2.06
RARAP10276 RNU6-850P-201ENST00000516934 103 ntBASIC2.21□□□□□ -2.06
RARAP10276 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RARAP10276 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
RARAP10276 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RARAP10276 RNU6-571P-201ENST00000384128 107 ntBASIC2.2□□□□□ -2.06
RARAP10276 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RARAP10276 RNU6-205P-201ENST00000390858 107 ntBASIC2.2□□□□□ -2.06
RARAP10276 AC025033.1-201ENST00000463883 194 ntBASIC2.2□□□□□ -2.06
RARAP10276 MIR2115-201ENST00000516657 100 ntBASIC2.2□□□□□ -2.06
RARAP10276 AC140658.3-201ENST00000567603 271 ntBASIC2.2□□□□□ -2.06
RARAP10276 MIR4712-201ENST00000583750 82 ntBASIC2.2□□□□□ -2.06
RARAP10276 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.2□□□□□ -2.06
RARAP10276 Y_RNA.119-201ENST00000363301 96 ntBASIC2.19□□□□□ -2.06
RARAP10276 SNORD115-37-201ENST00000363768 82 ntBASIC2.19□□□□□ -2.06
RARAP10276 SNORA25.9-201ENST00000365087 128 ntBASIC2.19□□□□□ -2.06
RARAP10276 RNU7-62P-201ENST00000458856 62 ntBASIC2.19□□□□□ -2.06
RARAP10276 SNORD4B-201ENST00000459083 72 ntBASIC2.19□□□□□ -2.06
RARAP10276 RN7SL274P-201ENST00000492268 272 ntBASIC2.19□□□□□ -2.06
RARAP10276 AP003716.2-201ENST00000528260 108 ntBASIC2.19□□□□□ -2.06
RARAP10276 MIR6840-201ENST00000611937 71 ntBASIC2.19□□□□□ -2.06
RARAP10276 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RARAP10276 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
RARAP10276 AC008163.1-202ENST00000636004 2889 ntBASIC2.19□□□□□ -2.06
RARAP10276 BX276092.1-201ENST00000427368 251 ntBASIC2.18□□□□□ -2.06
RARAP10276 RNU6-947P-201ENST00000516264 106 ntBASIC2.18□□□□□ -2.06
RARAP10276 RNU1-40P-201ENST00000516816 164 ntBASIC2.18□□□□□ -2.06
RARAP10276 RNU1-97P-201ENST00000516872 164 ntBASIC2.18□□□□□ -2.06
RARAP10276 MIR4498-201ENST00000577599 66 ntBASIC2.18□□□□□ -2.06
RARAP10276 MIR4713-201ENST00000582691 75 ntBASIC2.18□□□□□ -2.06
RARAP10276 uc_338.6-201ENST00000613544 171 ntBASIC2.18□□□□□ -2.06
RARAP10276 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.18□□□□□ -2.06
RARAP10276 MIR8074-201ENST00000615081 81 ntBASIC2.18□□□□□ -2.06
RARAP10276 MIR6873-201ENST00000622788 63 ntBASIC2.18□□□□□ -2.06
RARAP10276 MIR4662A-201ENST00000637499 67 ntBASIC2.18□□□□□ -2.06
RARAP10276 RNU6-776P-201ENST00000364403 104 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms