Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNU6-1244P-201ENST00000363614 108 ntBASIC2.08□□□□□ -2.08
PDGFAP04085 Y_RNA.190-201ENST00000363964 101 ntBASIC2.08□□□□□ -2.08
PDGFAP04085 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
PDGFAP04085 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
PDGFAP04085 Y_RNA.593-201ENST00000410292 98 ntBASIC2.08□□□□□ -2.08
PDGFAP04085 AC104435.1-201ENST00000483483 166 ntBASIC2.08□□□□□ -2.08
PDGFAP04085 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.08□□□□□ -2.08
PDGFAP04085 MIR4448-201ENST00000584360 86 ntBASIC2.08□□□□□ -2.08
PDGFAP04085 AL161722.3-201ENST00000605789 2983 ntBASIC2.08□□□□□ -2.08
PDGFAP04085 MIR494-201ENST00000349529 81 ntBASIC2.07□□□□□ -2.08
PDGFAP04085 SNORD116-22-201ENST00000384430 92 ntBASIC2.07□□□□□ -2.08
PDGFAP04085 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.07□□□□□ -2.08
PDGFAP04085 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
PDGFAP04085 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
PDGFAP04085 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
PDGFAP04085 HSBP1P2-201ENST00000299671 229 ntBASIC2.06□□□□□ -2.08
PDGFAP04085 Y_RNA.173-201ENST00000363776 113 ntBASIC2.06□□□□□ -2.08
PDGFAP04085 RNA5SP458-201ENST00000516188 119 ntBASIC2.06□□□□□ -2.08
PDGFAP04085 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.06□□□□□ -2.08
PDGFAP04085 AL512310.8-201ENST00000550183 120 ntBASIC2.06□□□□□ -2.08
PDGFAP04085 IGLL4P-201ENST00000614590 133 ntBASIC2.06□□□□□ -2.08
PDGFAP04085 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PDGFAP04085 MIR21-201ENST00000362134 72 ntBASIC2.05□□□□□ -2.08
PDGFAP04085 RNU6-1125P-201ENST00000363601 107 ntBASIC2.05□□□□□ -2.08
PDGFAP04085 RNU6-480P-201ENST00000384332 107 ntBASIC2.05□□□□□ -2.08
PDGFAP04085 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PDGFAP04085 AC008834.1-201ENST00000511612 175 ntBASIC2.05□□□□□ -2.08
PDGFAP04085 AC138749.4-201ENST00000563970 127 ntBASIC2.05□□□□□ -2.08
PDGFAP04085 U6.109-201ENST00000636749 87 ntBASIC2.05□□□□□ -2.08
PDGFAP04085 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PDGFAP04085 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PDGFAP04085 RNY1P1-201ENST00000364372 112 ntBASIC2.04□□□□□ -2.08
PDGFAP04085 RNU6-654P-201ENST00000364373 107 ntBASIC2.04□□□□□ -2.08
PDGFAP04085 RNU1-78P-201ENST00000391248 165 ntBASIC2.04□□□□□ -2.08
PDGFAP04085 RNU6-165P-201ENST00000517170 99 ntBASIC2.04□□□□□ -2.08
PDGFAP04085 MIR4422-201ENST00000581938 83 ntBASIC2.04□□□□□ -2.08
PDGFAP04085 RNA5SP489-201ENST00000410986 109 ntBASIC2.03□□□□□ -2.08
PDGFAP04085 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PDGFAP04085 AC245517.4-201ENST00000448601 281 ntBASIC2.03□□□□□ -2.08
PDGFAP04085 RNU1-98P-201ENST00000458992 160 ntBASIC2.03□□□□□ -2.08
PDGFAP04085 AC090897.1-201ENST00000580909 226 ntBASIC2.03□□□□□ -2.08
PDGFAP04085 MIR6766-201ENST00000622641 72 ntBASIC2.03□□□□□ -2.08
PDGFAP04085 MIR219B-201ENST00000637023 88 ntBASIC2.03□□□□□ -2.08
PDGFAP04085 RNY1P10-201ENST00000363268 113 ntBASIC2.02□□□□□ -2.09
PDGFAP04085 RNA5SP133-201ENST00000363368 119 ntBASIC2.02□□□□□ -2.09
PDGFAP04085 RNA5SP173-201ENST00000364857 136 ntBASIC2.02□□□□□ -2.09
PDGFAP04085 RNU6-580P-201ENST00000365159 107 ntBASIC2.02□□□□□ -2.09
PDGFAP04085 MIR18B-201ENST00000454574 71 ntBASIC2.02□□□□□ -2.09
PDGFAP04085 MIR4500-201ENST00000579472 76 ntBASIC2.02□□□□□ -2.09
PDGFAP04085 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
PDGFAP04085 U8.13-201ENST00000390842 128 ntBASIC2.01□□□□□ -2.09
PDGFAP04085 RNA5SP95-201ENST00000410319 137 ntBASIC2.01□□□□□ -2.09
PDGFAP04085 RNU6-1054P-201ENST00000411293 104 ntBASIC2.01□□□□□ -2.09
PDGFAP04085 RN7SKP88-201ENST00000516847 250 ntBASIC2.01□□□□□ -2.09
PDGFAP04085 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.01□□□□□ -2.09
PDGFAP04085 7SK.8-201ENST00000612110 250 ntBASIC2.01□□□□□ -2.09
PDGFAP04085 7SK.11-201ENST00000615477 250 ntBASIC2.01□□□□□ -2.09
PDGFAP04085 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
PDGFAP04085 7SK.13-201ENST00000622040 250 ntBASIC2.01□□□□□ -2.09
PDGFAP04085 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PDGFAP04085 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
PDGFAP04085 Y_RNA.119-201ENST00000363301 96 ntBASIC2□□□□□ -2.09
PDGFAP04085 RNU6-675P-201ENST00000384236 104 ntBASIC2□□□□□ -2.09
PDGFAP04085 SNORA2B-201ENST00000384583 137 ntBASIC2□□□□□ -2.09
PDGFAP04085 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2□□□□□ -2.09
PDGFAP04085 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
PDGFAP04085 RNU6-402P-201ENST00000410678 103 ntBASIC2□□□□□ -2.09
PDGFAP04085 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2□□□□□ -2.09
PDGFAP04085 RNU6-295P-201ENST00000516901 104 ntBASIC2□□□□□ -2.09
PDGFAP04085 uc_338.6-201ENST00000613544 171 ntBASIC2□□□□□ -2.09
PDGFAP04085 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PDGFAP04085 RNU6-53P-201ENST00000365367 106 ntBASIC1.99□□□□□ -2.09
PDGFAP04085 RNU6-1152P-201ENST00000384576 107 ntBASIC1.99□□□□□ -2.09
PDGFAP04085 MIR181B2-201ENST00000385004 89 ntBASIC1.99□□□□□ -2.09
PDGFAP04085 RPS27P16-201ENST00000425758 201 ntBASIC1.99□□□□□ -2.09
PDGFAP04085 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
PDGFAP04085 RNA5SP364-201ENST00000516938 78 ntBASIC1.99□□□□□ -2.09
PDGFAP04085 AC024614.2-201ENST00000577584 372 ntBASIC1.99□□□□□ -2.09
PDGFAP04085 MIR4668-201ENST00000582284 70 ntBASIC1.99□□□□□ -2.09
PDGFAP04085 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.99□□□□□ -2.09
PDGFAP04085 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PDGFAP04085 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PDGFAP04085 SNRPGP12-201ENST00000449481 213 ntBASIC1.98□□□□□ -2.09
PDGFAP04085 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.98□□□□□ -2.09
PDGFAP04085 MIR6845-201ENST00000613182 61 ntBASIC1.98□□□□□ -2.09
PDGFAP04085 AC008163.1-202ENST00000636004 2889 ntBASIC1.98□□□□□ -2.09
PDGFAP04085 Y_RNA.338-201ENST00000365320 114 ntBASIC1.97□□□□□ -2.09
PDGFAP04085 RNU6-571P-201ENST00000384128 107 ntBASIC1.97□□□□□ -2.09
PDGFAP04085 MIR934-201ENST00000401241 83 ntBASIC1.97□□□□□ -2.09
PDGFAP04085 SNORD93-201ENST00000408813 74 ntBASIC1.97□□□□□ -2.09
PDGFAP04085 AC048334.1-201ENST00000477975 159 ntBASIC1.97□□□□□ -2.09
PDGFAP04085 RNA5SP200-201ENST00000516360 103 ntBASIC1.97□□□□□ -2.09
PDGFAP04085 AL513043.2-201ENST00000573941 143 ntBASIC1.97□□□□□ -2.09
PDGFAP04085 MIR8066-201ENST00000617280 78 ntBASIC1.97□□□□□ -2.09
PDGFAP04085 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.96□□□□□ -2.09
PDGFAP04085 Y_RNA.4-201ENST00000362333 112 ntBASIC1.96□□□□□ -2.1
PDGFAP04085 RNU1-17P-201ENST00000363022 152 ntBASIC1.96□□□□□ -2.1
PDGFAP04085 Y_RNA.164-201ENST00000363709 102 ntBASIC1.96□□□□□ -2.1
PDGFAP04085 Y_RNA.330-201ENST00000365230 109 ntBASIC1.96□□□□□ -2.1
PDGFAP04085 RNY1P4-201ENST00000384595 115 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 218.1 ms