Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 UBE2WP1-201ENST00000362030 340 ntBASIC-1.01□□□□□ -2.57
SNX4O95219 RNU6-211P-201ENST00000384047 107 ntBASIC-1.01□□□□□ -2.57
SNX4O95219 RNU6-429P-201ENST00000384582 108 ntBASIC-1.01□□□□□ -2.57
SNX4O95219 MIR616-201ENST00000385293 97 ntBASIC-1.01□□□□□ -2.57
SNX4O95219 MT-TT-201ENST00000387460 66 ntBASIC-1.01□□□□□ -2.57
SNX4O95219 RNU7-74P-201ENST00000459104 62 ntBASIC-1.01□□□□□ -2.57
SNX4O95219 snoU13.19-201ENST00000459148 104 ntBASIC-1.01□□□□□ -2.57
SNX4O95219 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.01□□□□□ -2.57
SNX4O95219 SNORD19B-201ENST00000459623 84 ntBASIC-1.01□□□□□ -2.57
SNX4O95219 RNU6-449P-201ENST00000383914 107 ntBASIC-1.02□□□□□ -2.57
SNX4O95219 MIR635-201ENST00000384830 98 ntBASIC-1.02□□□□□ -2.57
SNX4O95219 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.02□□□□□ -2.57
SNX4O95219 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.02□□□□□ -2.57
SNX4O95219 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.02□□□□□ -2.57
SNX4O95219 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.02□□□□□ -2.57
SNX4O95219 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.02□□□□□ -2.57
SNX4O95219 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.02□□□□□ -2.57
SNX4O95219 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.03□□□□□ -2.57
SNX4O95219 RNU4-16P-201ENST00000364737 141 ntBASIC-1.03□□□□□ -2.57
SNX4O95219 AL132765.2-201ENST00000610812 351 ntBASIC-1.03□□□□□ -2.57
SNX4O95219 U6atac.1-201ENST00000616025 117 ntBASIC-1.03□□□□□ -2.57
SNX4O95219 AC093726.3-201ENST00000637588 150 ntBASIC-1.03□□□□□ -2.57
SNX4O95219 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.04□□□□□ -2.58
SNX4O95219 RNY1P2-201ENST00000364820 117 ntBASIC-1.04□□□□□ -2.58
SNX4O95219 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.04□□□□□ -2.58
SNX4O95219 MIR196A1-201ENST00000388006 70 ntBASIC-1.04□□□□□ -2.58
SNX4O95219 RNU4-63P-201ENST00000411313 118 ntBASIC-1.04□□□□□ -2.58
SNX4O95219 RNU7-113P-201ENST00000459273 62 ntBASIC-1.04□□□□□ -2.58
SNX4O95219 HAR1A.1-201ENST00000459583 118 ntBASIC-1.04□□□□□ -2.58
SNX4O95219 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.04□□□□□ -2.58
SNX4O95219 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.04□□□□□ -2.58
SNX4O95219 SNORD114-10-201ENST00000363409 72 ntBASIC-1.05□□□□□ -2.58
SNX4O95219 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.05□□□□□ -2.58
SNX4O95219 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.05□□□□□ -2.58
SNX4O95219 RNU6-47P-201ENST00000383866 107 ntBASIC-1.05□□□□□ -2.58
SNX4O95219 MIR599-201ENST00000385069 95 ntBASIC-1.05□□□□□ -2.58
SNX4O95219 RNU7-137P-201ENST00000516788 62 ntBASIC-1.05□□□□□ -2.58
SNX4O95219 MIR3681-201ENST00000580089 72 ntBASIC-1.05□□□□□ -2.58
SNX4O95219 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.06□□□□□ -2.58
SNX4O95219 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.06□□□□□ -2.58
SNX4O95219 AC097635.1-201ENST00000450678 155 ntBASIC-1.06□□□□□ -2.58
SNX4O95219 RNA5SP33-201ENST00000516687 98 ntBASIC-1.06□□□□□ -2.58
SNX4O95219 RNU7-188P-201ENST00000517063 64 ntBASIC-1.06□□□□□ -2.58
SNX4O95219 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.07□□□□□ -2.58
SNX4O95219 RNY1P7-201ENST00000384743 110 ntBASIC-1.07□□□□□ -2.58
SNX4O95219 SNORD115-2-201ENST00000362842 82 ntBASIC-1.08□□□□□ -2.58
SNX4O95219 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.08□□□□□ -2.58
SNX4O95219 SNORD115-20-201ENST00000365099 82 ntBASIC-1.08□□□□□ -2.58
SNX4O95219 RNU6-728P-201ENST00000365375 104 ntBASIC-1.08□□□□□ -2.58
SNX4O95219 RNU6-455P-201ENST00000384681 107 ntBASIC-1.08□□□□□ -2.58
SNX4O95219 RNA5SP144-201ENST00000410846 116 ntBASIC-1.08□□□□□ -2.58
SNX4O95219 SNORA40.15-201ENST00000516884 107 ntBASIC-1.08□□□□□ -2.58
SNX4O95219 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.08□□□□□ -2.58
SNX4O95219 RNY1P6-201ENST00000384193 109 ntBASIC-1.09□□□□□ -2.58
SNX4O95219 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.09□□□□□ -2.58
SNX4O95219 RNU6-138P-201ENST00000515952 107 ntBASIC-1.09□□□□□ -2.58
SNX4O95219 SNORD67.1-201ENST00000516618 108 ntBASIC-1.09□□□□□ -2.58
SNX4O95219 RNU6-881P-201ENST00000516813 102 ntBASIC-1.09□□□□□ -2.58
SNX4O95219 SCARNA15-202ENST00000516881 127 ntBASIC-1.09□□□□□ -2.58
SNX4O95219 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.1□□□□□ -2.59
SNX4O95219 SNORA32-201ENST00000384072 121 ntBASIC-1.1□□□□□ -2.59
SNX4O95219 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.1□□□□□ -2.59
SNX4O95219 MIR9-2-201ENST00000384838 87 ntBASIC-1.1□□□□□ -2.59
SNX4O95219 MIR1252-201ENST00000408861 65 ntBASIC-1.1□□□□□ -2.59
SNX4O95219 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.1□□□□□ -2.59
SNX4O95219 AC138393.2-201ENST00000414742 246 ntBASIC-1.1□□□□□ -2.59
SNX4O95219 AL445193.1-201ENST00000441183 141 ntBASIC-1.1□□□□□ -2.59
SNX4O95219 TRAJ51-201ENST00000504127 63 ntBASIC-1.1□□□□□ -2.59
SNX4O95219 RNU6-453P-201ENST00000516819 85 ntBASIC-1.1□□□□□ -2.59
SNX4O95219 RNU6-175P-201ENST00000516896 107 ntBASIC-1.1□□□□□ -2.59
SNX4O95219 IGKV1-22-201ENST00000524313 326 ntBASIC-1.1□□□□□ -2.59
SNX4O95219 MIR548AX-201ENST00000580117 73 ntBASIC-1.1□□□□□ -2.59
SNX4O95219 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.11□□□□□ -2.59
SNX4O95219 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.11□□□□□ -2.59
SNX4O95219 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
SNX4O95219 RNU6-121P-201ENST00000410525 99 ntBASIC-1.11□□□□□ -2.59
SNX4O95219 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.11□□□□□ -2.59
SNX4O95219 SNORD116-25-201ENST00000516517 92 ntBASIC-1.11□□□□□ -2.59
SNX4O95219 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
SNX4O95219 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.12□□□□□ -2.59
SNX4O95219 SNORD56B-201ENST00000384713 71 ntBASIC-1.12□□□□□ -2.59
SNX4O95219 MIR181B2-201ENST00000385004 89 ntBASIC-1.12□□□□□ -2.59
SNX4O95219 RNU4-43P-201ENST00000410628 137 ntBASIC-1.12□□□□□ -2.59
SNX4O95219 FGF7P4-201ENST00000509595 295 ntBASIC-1.12□□□□□ -2.59
SNX4O95219 AC021146.6-201ENST00000514659 117 ntBASIC-1.12□□□□□ -2.59
SNX4O95219 RNU7-13P-201ENST00000516413 62 ntBASIC-1.12□□□□□ -2.59
SNX4O95219 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.12□□□□□ -2.59
SNX4O95219 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
SNX4O95219 MIR3920-201ENST00000581751 86 ntBASIC-1.12□□□□□ -2.59
SNX4O95219 MIR4280-201ENST00000582178 76 ntBASIC-1.12□□□□□ -2.59
SNX4O95219 MIR4473-201ENST00000583731 91 ntBASIC-1.12□□□□□ -2.59
SNX4O95219 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.12□□□□□ -2.59
SNX4O95219 RNU1-141P-201ENST00000364623 158 ntBASIC-1.13□□□□□ -2.59
SNX4O95219 MIR204-201ENST00000385200 110 ntBASIC-1.13□□□□□ -2.59
SNX4O95219 SNORD83B-201ENST00000386745 93 ntBASIC-1.13□□□□□ -2.59
SNX4O95219 AL603914.1-201ENST00000401964 204 ntBASIC-1.13□□□□□ -2.59
SNX4O95219 AC082651.2-201ENST00000496833 166 ntBASIC-1.13□□□□□ -2.59
SNX4O95219 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.13□□□□□ -2.59
SNX4O95219 AP001328.1-201ENST00000528550 176 ntBASIC-1.13□□□□□ -2.59
SNX4O95219 uc_338.10-201ENST00000621872 182 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms