Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 U6.90-201ENST00000614007 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 U6.70-201ENST00000620287 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 Z97988.1-201ENST00000637697 135 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 AP000553.5-201ENST00000641933 54 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR29C-201ENST00000385231 88 ntBASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNA5SP237-201ENST00000410414 113 ntBASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 SNORD4B-201ENST00000459083 72 ntBASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-523P-201ENST00000516304 54 ntBASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 SNORA74.3-201ENST00000517108 154 ntBASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 AC133485.1-201ENST00000567176 124 ntBASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 AC090897.1-201ENST00000580909 226 ntBASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR8066-201ENST00000617280 78 ntBASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 AC008133.2-201ENST00000624540 351 ntBASIC1.88□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-161P-201ENST00000363051 106 ntBASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 Y_RNA.508-201ENST00000384502 114 ntBASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU4-83P-201ENST00000410863 133 ntBASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 HMGN2P23-201ENST00000456759 269 ntBASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RPS29P11-201ENST00000496507 171 ntBASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-917P-201ENST00000516294 104 ntBASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-1108P-201ENST00000516308 104 ntBASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR548AO-201ENST00000579992 96 ntBASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR4484-201ENST00000582855 83 ntBASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 AL353997.5-201ENST00000618886 171 ntBASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 AL513423.1-201ENST00000621695 132 ntBASIC1.87□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNA5SP133-201ENST00000363368 119 ntBASIC1.86□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-590P-201ENST00000365039 107 ntBASIC1.86□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR520A-201ENST00000384862 85 ntBASIC1.86□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 AC003989.2-201ENST00000440224 169 ntBASIC1.86□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR4500-201ENST00000579472 76 ntBASIC1.86□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR4764-201ENST00000580680 88 ntBASIC1.86□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-624P-201ENST00000363411 107 ntBASIC1.85□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR520C-201ENST00000385005 87 ntBASIC1.85□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU7-85P-201ENST00000458851 63 ntBASIC1.85□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 AC099513.1-201ENST00000490423 301 ntBASIC1.85□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNA5SP445-201ENST00000515889 115 ntBASIC1.85□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 SUB1P4-201ENST00000566062 339 ntBASIC1.85□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 AC141846.1-201ENST00000568348 142 ntBASIC1.85□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR4796-201ENST00000580742 81 ntBASIC1.85□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR4448-201ENST00000584360 86 ntBASIC1.85□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 AC084768.2-201ENST00000622736 221 ntBASIC1.85□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 Y_RNA.340-201ENST00000365330 92 ntBASIC1.84□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 SNORD38B-201ENST00000384690 67 ntBASIC1.84□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR676-201ENST00000390702 67 ntBASIC1.84□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNA5SP338-201ENST00000410495 85 ntBASIC1.84□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 snoU13.27-201ENST00000459278 104 ntBASIC1.84□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 AP000753.3-201ENST00000604083 169 ntBASIC1.84□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.84□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 SNORD38B-202ENST00000625943 69 ntBASIC1.84□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 HSBP1P2-201ENST00000299671 229 ntBASIC1.83□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 MIRLET7A1-201ENST00000362295 80 ntBASIC1.83□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 SNORA63.2-201ENST00000362603 126 ntBASIC1.83□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-686P-201ENST00000364839 107 ntBASIC1.83□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-380P-201ENST00000410207 107 ntBASIC1.83□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 BX276092.1-201ENST00000427368 251 ntBASIC1.83□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 SNORA25.15-201ENST00000516487 89 ntBASIC1.83□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU7-43P-201ENST00000516554 64 ntBASIC1.83□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNA5SP137-201ENST00000516833 135 ntBASIC1.83□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-850P-201ENST00000516934 103 ntBASIC1.83□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNA5SP99-201ENST00000364020 114 ntBASIC1.82□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 SNORA16.1-201ENST00000364597 132 ntBASIC1.82□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-411P-201ENST00000384451 107 ntBASIC1.82□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNA5SP292-201ENST00000390974 118 ntBASIC1.82□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 MIR1283-2-201ENST00000408621 87 ntBASIC1.82□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 AC125388.1-201ENST00000459631 156 ntBASIC1.82□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.82□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 MIR4251-201ENST00000635819 61 ntBASIC1.82□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 U6.109-201ENST00000636749 87 ntBASIC1.82□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 MIR424-201ENST00000362227 98 ntBASIC1.81□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 MIR635-201ENST00000384830 98 ntBASIC1.81□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 HMGN2P39-201ENST00000398005 273 ntBASIC1.81□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-539P-201ENST00000516665 103 ntBASIC1.81□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-1015P-201ENST00000517121 99 ntBASIC1.81□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 AL512598.1-201ENST00000610158 273 ntBASIC1.81□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 AL662814.1-201ENST00000617364 121 ntBASIC1.81□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-112P-201ENST00000363599 104 ntBASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNY1P2-201ENST00000364820 117 ntBASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-296P-201ENST00000384608 107 ntBASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNA5SP501-201ENST00000410990 112 ntBASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms