Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AL021368.2-201ENST00000606125 5352 ntBASIC2.55□□□□□ -2
RNF223E7ERA6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
RNF223E7ERA6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.54□□□□□ -2
RNF223E7ERA6 Y_RNA.13-201ENST00000362403 112 ntBASIC2.54□□□□□ -2
RNF223E7ERA6 SNORA25.5-201ENST00000363782 126 ntBASIC2.54□□□□□ -2
RNF223E7ERA6 Y_RNA.375-201ENST00000365625 101 ntBASIC2.54□□□□□ -2
RNF223E7ERA6 RNA5SP293-201ENST00000410527 113 ntBASIC2.54□□□□□ -2
RNF223E7ERA6 snoU13.25-201ENST00000458945 104 ntBASIC2.54□□□□□ -2
RNF223E7ERA6 AP003716.2-201ENST00000528260 108 ntBASIC2.54□□□□□ -2
RNF223E7ERA6 MIR3186-201ENST00000577404 85 ntBASIC2.54□□□□□ -2
RNF223E7ERA6 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.54□□□□□ -2
RNF223E7ERA6 MIR7978-201ENST00000636158 59 ntBASIC2.54□□□□□ -2
RNF223E7ERA6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.54□□□□□ -2
RNF223E7ERA6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.54□□□□□ -2
RNF223E7ERA6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF223E7ERA6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF223E7ERA6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.53□□□□□ -2
RNF223E7ERA6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RNF223E7ERA6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RNF223E7ERA6 RNA5SP184-201ENST00000411071 108 ntBASIC2.53□□□□□ -2
RNF223E7ERA6 RNU6-765P-201ENST00000516916 99 ntBASIC2.53□□□□□ -2
RNF223E7ERA6 AC138907.6-201ENST00000568401 126 ntBASIC2.53□□□□□ -2
RNF223E7ERA6 AC138869.1-201ENST00000568623 124 ntBASIC2.53□□□□□ -2
RNF223E7ERA6 MIR5047-201ENST00000579212 100 ntBASIC2.53□□□□□ -2
RNF223E7ERA6 MIR3920-201ENST00000581751 86 ntBASIC2.53□□□□□ -2
RNF223E7ERA6 MIR4435-1-201ENST00000582552 80 ntBASIC2.53□□□□□ -2
RNF223E7ERA6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
RNF223E7ERA6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF223E7ERA6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.52□□□□□ -2.01
RNF223E7ERA6 MIR1185-1-201ENST00000408598 86 ntBASIC2.52□□□□□ -2.01
RNF223E7ERA6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.52□□□□□ -2.01
RNF223E7ERA6 RNU7-185P-201ENST00000459215 60 ntBASIC2.52□□□□□ -2.01
RNF223E7ERA6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.52□□□□□ -2.01
RNF223E7ERA6 MIR3945-201ENST00000581853 98 ntBASIC2.52□□□□□ -2.01
RNF223E7ERA6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.52□□□□□ -2.01
RNF223E7ERA6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.52□□□□□ -2.01
RNF223E7ERA6 GHRLOS.1-201ENST00000610995 70 ntBASIC2.52□□□□□ -2.01
RNF223E7ERA6 RNA5SP192-201ENST00000364404 120 ntBASIC2.51□□□□□ -2.01
RNF223E7ERA6 RNU6-1335P-201ENST00000365426 107 ntBASIC2.51□□□□□ -2.01
RNF223E7ERA6 AL133373.1-201ENST00000497098 94 ntBASIC2.51□□□□□ -2.01
RNF223E7ERA6 AL078603.1-201ENST00000603824 313 ntBASIC2.51□□□□□ -2.01
RNF223E7ERA6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
RNF223E7ERA6 AC023934.1-201ENST00000574529 2389 ntBASIC2.51□□□□□ -2.01
RNF223E7ERA6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RNF223E7ERA6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.5□□□□□ -2.01
RNF223E7ERA6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
RNF223E7ERA6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RNF223E7ERA6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RNF223E7ERA6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RNF223E7ERA6 RNU6-805P-201ENST00000365643 106 ntBASIC2.5□□□□□ -2.01
RNF223E7ERA6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RNF223E7ERA6 MIR1257-201ENST00000408490 117 ntBASIC2.5□□□□□ -2.01
RNF223E7ERA6 RNA5SP95-201ENST00000410319 137 ntBASIC2.5□□□□□ -2.01
RNF223E7ERA6 AC108938.1-201ENST00000451204 136 ntBASIC2.5□□□□□ -2.01
RNF223E7ERA6 RNU6-250P-201ENST00000516958 103 ntBASIC2.5□□□□□ -2.01
RNF223E7ERA6 SCARNA20.6-201ENST00000517251 106 ntBASIC2.5□□□□□ -2.01
RNF223E7ERA6 MIR7153-201ENST00000637758 57 ntBASIC2.5□□□□□ -2.01
RNF223E7ERA6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
RNF223E7ERA6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.49□□□□□ -2.01
RNF223E7ERA6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RNF223E7ERA6 AC062016.1-201ENST00000355719 319 ntBASIC2.49□□□□□ -2.01
RNF223E7ERA6 RNU6-446P-201ENST00000362827 106 ntBASIC2.49□□□□□ -2.01
RNF223E7ERA6 RNA5SP450-201ENST00000411206 102 ntBASIC2.49□□□□□ -2.01
RNF223E7ERA6 RNA5SP508-201ENST00000411327 119 ntBASIC2.49□□□□□ -2.01
RNF223E7ERA6 RNA5SP270-201ENST00000411361 118 ntBASIC2.49□□□□□ -2.01
RNF223E7ERA6 HMGN1P18-201ENST00000457642 277 ntBASIC2.49□□□□□ -2.01
RNF223E7ERA6 RPS27P29-201ENST00000463110 252 ntBASIC2.49□□□□□ -2.01
RNF223E7ERA6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.49□□□□□ -2.01
RNF223E7ERA6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.49□□□□□ -2.01
RNF223E7ERA6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RNF223E7ERA6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.49□□□□□ -2.01
RNF223E7ERA6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.49□□□□□ -2.01
RNF223E7ERA6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RNF223E7ERA6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RNF223E7ERA6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.48□□□□□ -2.01
RNF223E7ERA6 MIR103A2-201ENST00000362154 78 ntBASIC2.48□□□□□ -2.01
RNF223E7ERA6 SNORD56.3-201ENST00000363507 71 ntBASIC2.48□□□□□ -2.01
RNF223E7ERA6 SNORD75.2-201ENST00000408784 58 ntBASIC2.48□□□□□ -2.01
RNF223E7ERA6 AC087499.2-201ENST00000432861 149 ntBASIC2.48□□□□□ -2.01
RNF223E7ERA6 RN7SL20P-201ENST00000488827 297 ntBASIC2.48□□□□□ -2.01
RNF223E7ERA6 RNU6-947P-201ENST00000516264 106 ntBASIC2.48□□□□□ -2.01
RNF223E7ERA6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.48□□□□□ -2.01
RNF223E7ERA6 AC015688.6-201ENST00000577737 104 ntBASIC2.48□□□□□ -2.01
RNF223E7ERA6 AC103810.8-201ENST00000607347 118 ntBASIC2.48□□□□□ -2.01
RNF223E7ERA6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.48□□□□□ -2.01
RNF223E7ERA6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RNF223E7ERA6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RNF223E7ERA6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RNF223E7ERA6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.48□□□□□ -2.01
RNF223E7ERA6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RNF223E7ERA6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RNF223E7ERA6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RNF223E7ERA6 AL596028.1-201ENST00000326971 197 ntBASIC2.47□□□□□ -2.01
RNF223E7ERA6 RNU6-369P-201ENST00000362515 102 ntBASIC2.47□□□□□ -2.01
RNF223E7ERA6 RNA5SP264-201ENST00000363115 107 ntBASIC2.47□□□□□ -2.01
RNF223E7ERA6 RNU6-851P-201ENST00000384565 107 ntBASIC2.47□□□□□ -2.01
RNF223E7ERA6 MIR196B-201ENST00000384852 84 ntBASIC2.47□□□□□ -2.01
RNF223E7ERA6 JTBP1-201ENST00000441314 247 ntBASIC2.47□□□□□ -2.01
RNF223E7ERA6 SCARNA21.1-201ENST00000515996 128 ntBASIC2.47□□□□□ -2.01
RNF223E7ERA6 RNU6-287P-201ENST00000516230 98 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms