Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 RNA5SP492-201ENST00000411330 114 ntBASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 RN7SL499P-201ENST00000481141 276 ntBASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 AC097510.1-201ENST00000510945 133 ntBASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 SNORA31.26-201ENST00000517250 137 ntBASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 U6.100-201ENST00000636230 99 ntBASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 SNORA5B-201ENST00000363786 132 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 U8.9-201ENST00000365667 134 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 MIR514B-201ENST00000516774 80 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 MIR5089-201ENST00000580047 84 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 5S_rRNA.15-201ENST00000611169 127 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 MIR8053-201ENST00000613344 75 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 MIR6082-201ENST00000613604 109 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 AC023934.1-201ENST00000574529 2389 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.47□□□□□ -1.85
SPDYE4A6NLX3 RNU4-37P-201ENST00000410214 84 ntBASIC3.47□□□□□ -1.85
SPDYE4A6NLX3 RNU7-185P-201ENST00000459215 60 ntBASIC3.47□□□□□ -1.85
SPDYE4A6NLX3 S100A11P2-201ENST00000467589 312 ntBASIC3.47□□□□□ -1.85
SPDYE4A6NLX3 AL627230.6-201ENST00000611129 280 ntBASIC3.47□□□□□ -1.85
SPDYE4A6NLX3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.47□□□□□ -1.85
SPDYE4A6NLX3 AC016717.2-201ENST00000609089 5141 ntBASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 SNORA25.4-201ENST00000363666 124 ntBASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 SNORA6-201ENST00000384033 151 ntBASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 MIR1257-201ENST00000408490 117 ntBASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 AC097635.1-201ENST00000450678 155 ntBASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 MTRNR2L2-201ENST00000604882 87 ntBASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 Y_RNA.13-201ENST00000362403 112 ntBASIC3.45□□□□□ -1.86
SPDYE4A6NLX3 RNU6-1054P-201ENST00000411293 104 ntBASIC3.45□□□□□ -1.86
SPDYE4A6NLX3 Y_RNA.697-201ENST00000516776 113 ntBASIC3.45□□□□□ -1.86
SPDYE4A6NLX3 ZNF658B-202ENST00000615961 3375 ntBASIC3.45□□□□□ -1.86
SPDYE4A6NLX3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.45□□□□□ -1.86
SPDYE4A6NLX3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SPDYE4A6NLX3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SPDYE4A6NLX3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.44□□□□□ -1.86
SPDYE4A6NLX3 U6.81-201ENST00000612550 106 ntBASIC3.44□□□□□ -1.86
SPDYE4A6NLX3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 Y_RNA.443-201ENST00000384135 111 ntBASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 SNORD45A-201ENST00000384512 84 ntBASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 RNU6-935P-201ENST00000410371 100 ntBASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 RNU6-765P-201ENST00000516916 99 ntBASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 SNORA77B-201ENST00000578179 125 ntBASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 AC007318.2-201ENST00000620999 243 ntBASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 RNA5SP276-201ENST00000362580 94 ntBASIC3.42□□□□□ -1.86
SPDYE4A6NLX3 SNORD45.1-201ENST00000363181 77 ntBASIC3.42□□□□□ -1.86
SPDYE4A6NLX3 SNORA24B-201ENST00000384176 131 ntBASIC3.42□□□□□ -1.86
SPDYE4A6NLX3 RNU6-881P-201ENST00000516813 102 ntBASIC3.42□□□□□ -1.86
SPDYE4A6NLX3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SPDYE4A6NLX3 AL359851.1-201ENST00000569460 4997 ntBASIC3.41□□□□□ -1.86
SPDYE4A6NLX3 MIR9-2-201ENST00000384838 87 ntBASIC3.41□□□□□ -1.86
SPDYE4A6NLX3 SNORD67-201ENST00000390833 111 ntBASIC3.41□□□□□ -1.86
SPDYE4A6NLX3 AC055731.1-201ENST00000474387 401 ntBASIC3.41□□□□□ -1.86
SPDYE4A6NLX3 uc_338.1-201ENST00000612113 180 ntBASIC3.41□□□□□ -1.86
SPDYE4A6NLX3 SNORA80A-201ENST00000363922 136 ntBASIC3.4□□□□□ -1.87
SPDYE4A6NLX3 RNA5SP126-201ENST00000365092 109 ntBASIC3.4□□□□□ -1.87
SPDYE4A6NLX3 AC138907.6-201ENST00000568401 126 ntBASIC3.4□□□□□ -1.87
SPDYE4A6NLX3 AC138869.1-201ENST00000568623 124 ntBASIC3.4□□□□□ -1.87
SPDYE4A6NLX3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.4□□□□□ -1.87
SPDYE4A6NLX3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SPDYE4A6NLX3 MIR337-201ENST00000362281 93 ntBASIC3.39□□□□□ -1.87
SPDYE4A6NLX3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.39□□□□□ -1.87
SPDYE4A6NLX3 MIR599-201ENST00000385069 95 ntBASIC3.39□□□□□ -1.87
SPDYE4A6NLX3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SPDYE4A6NLX3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.39□□□□□ -1.87
SPDYE4A6NLX3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SPDYE4A6NLX3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SPDYE4A6NLX3 RNU6-824P-201ENST00000363724 104 ntBASIC3.38□□□□□ -1.87
SPDYE4A6NLX3 SNORA71.1-201ENST00000364523 117 ntBASIC3.38□□□□□ -1.87
SPDYE4A6NLX3 RNU6-499P-201ENST00000365615 107 ntBASIC3.38□□□□□ -1.87
SPDYE4A6NLX3 SNORA44-201ENST00000384584 132 ntBASIC3.38□□□□□ -1.87
SPDYE4A6NLX3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.38□□□□□ -1.87
SPDYE4A6NLX3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 MIR451A-201ENST00000385059 72 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 MIR887-201ENST00000401258 79 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 RNU6-1052P-201ENST00000411398 104 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 AC008885.1-201ENST00000514930 301 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 SNORA31.11-201ENST00000516528 139 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 RNU6-719P-201ENST00000516671 104 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 MIR8074-201ENST00000615081 81 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.36□□□□□ -1.87
SPDYE4A6NLX3 SNORD115-22-201ENST00000364456 82 ntBASIC3.36□□□□□ -1.87
SPDYE4A6NLX3 MIR2113-201ENST00000459007 91 ntBASIC3.36□□□□□ -1.87
SPDYE4A6NLX3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SPDYE4A6NLX3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.35□□□□□ -1.87
SPDYE4A6NLX3 RNU6-1216P-201ENST00000362590 107 ntBASIC3.35□□□□□ -1.87
SPDYE4A6NLX3 SNORD15B-201ENST00000384714 146 ntBASIC3.35□□□□□ -1.87
SPDYE4A6NLX3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SPDYE4A6NLX3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SPDYE4A6NLX3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms