Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 RNA5SP492-201ENST00000411330 114 ntBASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 RN7SL499P-201ENST00000481141 276 ntBASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 AC097510.1-201ENST00000510945 133 ntBASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 SNORA31.26-201ENST00000517250 137 ntBASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 U6.100-201ENST00000636230 99 ntBASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
SPDYE4A6NLX3 SNORA5B-201ENST00000363786 132 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 U8.9-201ENST00000365667 134 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 MIR514B-201ENST00000516774 80 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 MIR5089-201ENST00000580047 84 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 5S_rRNA.15-201ENST00000611169 127 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 MIR8053-201ENST00000613344 75 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 MIR6082-201ENST00000613604 109 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 AC023934.1-201ENST00000574529 2389 ntBASIC3.48□□□□□ -1.85
SPDYE4A6NLX3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.47□□□□□ -1.85
SPDYE4A6NLX3 RNU4-37P-201ENST00000410214 84 ntBASIC3.47□□□□□ -1.85
SPDYE4A6NLX3 RNU7-185P-201ENST00000459215 60 ntBASIC3.47□□□□□ -1.85
SPDYE4A6NLX3 S100A11P2-201ENST00000467589 312 ntBASIC3.47□□□□□ -1.85
SPDYE4A6NLX3 AL627230.6-201ENST00000611129 280 ntBASIC3.47□□□□□ -1.85
SPDYE4A6NLX3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.47□□□□□ -1.85
SPDYE4A6NLX3 AC016717.2-201ENST00000609089 5141 ntBASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 SNORA25.4-201ENST00000363666 124 ntBASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 SNORA6-201ENST00000384033 151 ntBASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 MIR1257-201ENST00000408490 117 ntBASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 AC097635.1-201ENST00000450678 155 ntBASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 MTRNR2L2-201ENST00000604882 87 ntBASIC3.46□□□□□ -1.86
SPDYE4A6NLX3 Y_RNA.13-201ENST00000362403 112 ntBASIC3.45□□□□□ -1.86
SPDYE4A6NLX3 RNU6-1054P-201ENST00000411293 104 ntBASIC3.45□□□□□ -1.86
SPDYE4A6NLX3 Y_RNA.697-201ENST00000516776 113 ntBASIC3.45□□□□□ -1.86
SPDYE4A6NLX3 ZNF658B-202ENST00000615961 3375 ntBASIC3.45□□□□□ -1.86
SPDYE4A6NLX3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.45□□□□□ -1.86
SPDYE4A6NLX3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SPDYE4A6NLX3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SPDYE4A6NLX3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.44□□□□□ -1.86
SPDYE4A6NLX3 U6.81-201ENST00000612550 106 ntBASIC3.44□□□□□ -1.86
SPDYE4A6NLX3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 Y_RNA.443-201ENST00000384135 111 ntBASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 SNORD45A-201ENST00000384512 84 ntBASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 RNU6-935P-201ENST00000410371 100 ntBASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 RNU6-765P-201ENST00000516916 99 ntBASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 SNORA77B-201ENST00000578179 125 ntBASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 AC007318.2-201ENST00000620999 243 ntBASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SPDYE4A6NLX3 RNA5SP276-201ENST00000362580 94 ntBASIC3.42□□□□□ -1.86
SPDYE4A6NLX3 SNORD45.1-201ENST00000363181 77 ntBASIC3.42□□□□□ -1.86
SPDYE4A6NLX3 SNORA24B-201ENST00000384176 131 ntBASIC3.42□□□□□ -1.86
SPDYE4A6NLX3 RNU6-881P-201ENST00000516813 102 ntBASIC3.42□□□□□ -1.86
SPDYE4A6NLX3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SPDYE4A6NLX3 AL359851.1-201ENST00000569460 4997 ntBASIC3.41□□□□□ -1.86
SPDYE4A6NLX3 MIR9-2-201ENST00000384838 87 ntBASIC3.41□□□□□ -1.86
SPDYE4A6NLX3 SNORD67-201ENST00000390833 111 ntBASIC3.41□□□□□ -1.86
SPDYE4A6NLX3 AC055731.1-201ENST00000474387 401 ntBASIC3.41□□□□□ -1.86
SPDYE4A6NLX3 uc_338.1-201ENST00000612113 180 ntBASIC3.41□□□□□ -1.86
SPDYE4A6NLX3 SNORA80A-201ENST00000363922 136 ntBASIC3.4□□□□□ -1.87
SPDYE4A6NLX3 RNA5SP126-201ENST00000365092 109 ntBASIC3.4□□□□□ -1.87
SPDYE4A6NLX3 AC138907.6-201ENST00000568401 126 ntBASIC3.4□□□□□ -1.87
SPDYE4A6NLX3 AC138869.1-201ENST00000568623 124 ntBASIC3.4□□□□□ -1.87
SPDYE4A6NLX3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.4□□□□□ -1.87
SPDYE4A6NLX3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SPDYE4A6NLX3 MIR337-201ENST00000362281 93 ntBASIC3.39□□□□□ -1.87
SPDYE4A6NLX3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.39□□□□□ -1.87
SPDYE4A6NLX3 MIR599-201ENST00000385069 95 ntBASIC3.39□□□□□ -1.87
SPDYE4A6NLX3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SPDYE4A6NLX3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.39□□□□□ -1.87
SPDYE4A6NLX3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SPDYE4A6NLX3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SPDYE4A6NLX3 RNU6-824P-201ENST00000363724 104 ntBASIC3.38□□□□□ -1.87
SPDYE4A6NLX3 SNORA71.1-201ENST00000364523 117 ntBASIC3.38□□□□□ -1.87
SPDYE4A6NLX3 RNU6-499P-201ENST00000365615 107 ntBASIC3.38□□□□□ -1.87
SPDYE4A6NLX3 SNORA44-201ENST00000384584 132 ntBASIC3.38□□□□□ -1.87
SPDYE4A6NLX3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.38□□□□□ -1.87
SPDYE4A6NLX3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 MIR451A-201ENST00000385059 72 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 MIR887-201ENST00000401258 79 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 RNU6-1052P-201ENST00000411398 104 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 AC008885.1-201ENST00000514930 301 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 SNORA31.11-201ENST00000516528 139 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 RNU6-719P-201ENST00000516671 104 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 MIR8074-201ENST00000615081 81 ntBASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
SPDYE4A6NLX3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.36□□□□□ -1.87
SPDYE4A6NLX3 SNORD115-22-201ENST00000364456 82 ntBASIC3.36□□□□□ -1.87
SPDYE4A6NLX3 MIR2113-201ENST00000459007 91 ntBASIC3.36□□□□□ -1.87
SPDYE4A6NLX3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SPDYE4A6NLX3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.35□□□□□ -1.87
SPDYE4A6NLX3 RNU6-1216P-201ENST00000362590 107 ntBASIC3.35□□□□□ -1.87
SPDYE4A6NLX3 SNORD15B-201ENST00000384714 146 ntBASIC3.35□□□□□ -1.87
SPDYE4A6NLX3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SPDYE4A6NLX3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SPDYE4A6NLX3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms