Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 MIR516A2-201ENST00000384888 90 ntBASIC2.77□□□□□ -1.97
DNMT3AQ9Y6K1 MIR516A1-201ENST00000385033 90 ntBASIC2.77□□□□□ -1.97
DNMT3AQ9Y6K1 MIR524-201ENST00000385242 87 ntBASIC2.77□□□□□ -1.97
DNMT3AQ9Y6K1 MIR518E-201ENST00000385252 88 ntBASIC2.77□□□□□ -1.97
DNMT3AQ9Y6K1 RNU6-360P-201ENST00000390944 104 ntBASIC2.77□□□□□ -1.97
DNMT3AQ9Y6K1 RNA5SP100-201ENST00000410903 110 ntBASIC2.77□□□□□ -1.97
DNMT3AQ9Y6K1 RNA5SP59-201ENST00000410922 110 ntBASIC2.77□□□□□ -1.97
DNMT3AQ9Y6K1 SNORD123-201ENST00000459473 70 ntBASIC2.77□□□□□ -1.97
DNMT3AQ9Y6K1 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.77□□□□□ -1.97
DNMT3AQ9Y6K1 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.77□□□□□ -1.97
DNMT3AQ9Y6K1 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.77□□□□□ -1.97
DNMT3AQ9Y6K1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
DNMT3AQ9Y6K1 SNORA80A-201ENST00000363922 136 ntBASIC2.76□□□□□ -1.97
DNMT3AQ9Y6K1 RNU6-1051P-201ENST00000365471 102 ntBASIC2.76□□□□□ -1.97
DNMT3AQ9Y6K1 Y_RNA.537-201ENST00000384626 109 ntBASIC2.76□□□□□ -1.97
DNMT3AQ9Y6K1 AC087499.2-201ENST00000432861 149 ntBASIC2.76□□□□□ -1.97
DNMT3AQ9Y6K1 AP004217.1-201ENST00000480579 346 ntBASIC2.76□□□□□ -1.97
DNMT3AQ9Y6K1 AL357312.1-201ENST00000603879 298 ntBASIC2.76□□□□□ -1.97
DNMT3AQ9Y6K1 AC245884.12-201ENST00000615364 59 ntBASIC2.76□□□□□ -1.97
DNMT3AQ9Y6K1 MIR6733-201ENST00000635723 61 ntBASIC2.76□□□□□ -1.97
DNMT3AQ9Y6K1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.76□□□□□ -1.97
DNMT3AQ9Y6K1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
DNMT3AQ9Y6K1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
DNMT3AQ9Y6K1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
DNMT3AQ9Y6K1 MIR424-201ENST00000362227 98 ntBASIC2.75□□□□□ -1.97
DNMT3AQ9Y6K1 RNA5SP192-201ENST00000364404 120 ntBASIC2.75□□□□□ -1.97
DNMT3AQ9Y6K1 RNU6-571P-201ENST00000384128 107 ntBASIC2.75□□□□□ -1.97
DNMT3AQ9Y6K1 MIR9-1-201ENST00000385198 89 ntBASIC2.75□□□□□ -1.97
DNMT3AQ9Y6K1 RNU6-466P-201ENST00000391224 103 ntBASIC2.75□□□□□ -1.97
DNMT3AQ9Y6K1 AC027119.1-201ENST00000440877 241 ntBASIC2.75□□□□□ -1.97
DNMT3AQ9Y6K1 MIR3605-201ENST00000583214 100 ntBASIC2.75□□□□□ -1.97
DNMT3AQ9Y6K1 MIR7106-201ENST00000612419 65 ntBASIC2.75□□□□□ -1.97
DNMT3AQ9Y6K1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
DNMT3AQ9Y6K1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
DNMT3AQ9Y6K1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.74□□□□□ -1.97
DNMT3AQ9Y6K1 RNU6-957P-201ENST00000363652 99 ntBASIC2.74□□□□□ -1.97
DNMT3AQ9Y6K1 Y_RNA.354-201ENST00000365448 111 ntBASIC2.74□□□□□ -1.97
DNMT3AQ9Y6K1 MIR887-201ENST00000401258 79 ntBASIC2.74□□□□□ -1.97
DNMT3AQ9Y6K1 snoU13.16-201ENST00000459350 104 ntBASIC2.74□□□□□ -1.97
DNMT3AQ9Y6K1 AC099513.1-201ENST00000490423 301 ntBASIC2.74□□□□□ -1.97
DNMT3AQ9Y6K1 RNU2-19P-201ENST00000517288 84 ntBASIC2.74□□□□□ -1.97
DNMT3AQ9Y6K1 AC138749.4-201ENST00000563970 127 ntBASIC2.74□□□□□ -1.97
DNMT3AQ9Y6K1 AC006386.2-201ENST00000624491 75 ntBASIC2.74□□□□□ -1.97
DNMT3AQ9Y6K1 AC012005.1-201ENST00000624575 75 ntBASIC2.74□□□□□ -1.97
DNMT3AQ9Y6K1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 MIR526A1-201ENST00000384897 85 ntBASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 RNU6-243P-201ENST00000391140 107 ntBASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 RNU6-1254P-201ENST00000391266 104 ntBASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 RNA5SP21-201ENST00000410917 96 ntBASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 SUMO1P4-201ENST00000429430 302 ntBASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 RPS29P6-201ENST00000438196 145 ntBASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 SNORA9.3-201ENST00000516383 129 ntBASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 AC141846.1-201ENST00000568348 142 ntBASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 RPL12P50-201ENST00000603116 116 ntBASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 Z97988.1-201ENST00000637697 135 ntBASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 AC131280.1-202ENST00000624067 4211 ntBASIC2.73□□□□□ -1.97
DNMT3AQ9Y6K1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
DNMT3AQ9Y6K1 AL596028.1-201ENST00000326971 197 ntBASIC2.72□□□□□ -1.97
DNMT3AQ9Y6K1 AL138827.1-201ENST00000402666 306 ntBASIC2.72□□□□□ -1.97
DNMT3AQ9Y6K1 RN7SKP132-201ENST00000516001 208 ntBASIC2.72□□□□□ -1.97
DNMT3AQ9Y6K1 SNORA74.3-201ENST00000517108 154 ntBASIC2.72□□□□□ -1.97
DNMT3AQ9Y6K1 MIR3140-201ENST00000583685 90 ntBASIC2.72□□□□□ -1.97
DNMT3AQ9Y6K1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
DNMT3AQ9Y6K1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DNMT3AQ9Y6K1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DNMT3AQ9Y6K1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
DNMT3AQ9Y6K1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
DNMT3AQ9Y6K1 RNU6-1123P-201ENST00000362347 106 ntBASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 SNORA25.5-201ENST00000363782 126 ntBASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 RNU1-138P-201ENST00000384093 164 ntBASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 Y_RNA.606-201ENST00000410579 103 ntBASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 RN7SL499P-201ENST00000481141 276 ntBASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 SNORA31.17-201ENST00000516953 127 ntBASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 GTF3AP2-201ENST00000557014 266 ntBASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 MIR4298-201ENST00000584380 73 ntBASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 AL033523.1-201ENST00000605153 153 ntBASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 U4.3-201ENST00000621047 82 ntBASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 U6.109-201ENST00000636749 87 ntBASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
DNMT3AQ9Y6K1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
DNMT3AQ9Y6K1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
DNMT3AQ9Y6K1 AC080100.1-201ENST00000624239 5356 ntBASIC2.7□□□□□ -1.98
DNMT3AQ9Y6K1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.7□□□□□ -1.98
DNMT3AQ9Y6K1 SNORD23.1-201ENST00000408212 104 ntBASIC2.7□□□□□ -1.98
DNMT3AQ9Y6K1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.7□□□□□ -1.98
DNMT3AQ9Y6K1 RNU6-982P-201ENST00000516216 102 ntBASIC2.7□□□□□ -1.98
DNMT3AQ9Y6K1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.7□□□□□ -1.98
DNMT3AQ9Y6K1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
DNMT3AQ9Y6K1 RNA5SP237-201ENST00000410414 113 ntBASIC2.69□□□□□ -1.98
DNMT3AQ9Y6K1 HMGN2P35-201ENST00000412164 270 ntBASIC2.69□□□□□ -1.98
DNMT3AQ9Y6K1 AC003982.1-202ENST00000469928 248 ntBASIC2.69□□□□□ -1.98
DNMT3AQ9Y6K1 AC055731.1-201ENST00000474387 401 ntBASIC2.69□□□□□ -1.98
DNMT3AQ9Y6K1 MIR5089-201ENST00000580047 84 ntBASIC2.69□□□□□ -1.98
DNMT3AQ9Y6K1 MIR4513-201ENST00000581077 86 ntBASIC2.69□□□□□ -1.98
DNMT3AQ9Y6K1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.69□□□□□ -1.98
DNMT3AQ9Y6K1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
DNMT3AQ9Y6K1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 206.3 ms