Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC011753.1-201ENST00000451001 220 ntBASIC3.16□□□□□ -1.9
HPS5Q9UPZ3 AC099513.1-201ENST00000490423 301 ntBASIC3.16□□□□□ -1.9
HPS5Q9UPZ3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
HPS5Q9UPZ3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HPS5Q9UPZ3 RNU6-1254P-201ENST00000391266 104 ntBASIC3.15□□□□□ -1.91
HPS5Q9UPZ3 MIR942-201ENST00000401111 86 ntBASIC3.15□□□□□ -1.91
HPS5Q9UPZ3 AC244636.1-201ENST00000421152 228 ntBASIC3.15□□□□□ -1.91
HPS5Q9UPZ3 U6.109-201ENST00000636749 87 ntBASIC3.15□□□□□ -1.91
HPS5Q9UPZ3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HPS5Q9UPZ3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HPS5Q9UPZ3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HPS5Q9UPZ3 AL161722.3-201ENST00000605789 2983 ntBASIC3.15□□□□□ -1.91
HPS5Q9UPZ3 Y_RNA.118-201ENST00000363300 101 ntBASIC3.14□□□□□ -1.91
HPS5Q9UPZ3 SNORD88.1-201ENST00000408684 91 ntBASIC3.14□□□□□ -1.91
HPS5Q9UPZ3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.14□□□□□ -1.91
HPS5Q9UPZ3 MIR6733-201ENST00000635723 61 ntBASIC3.14□□□□□ -1.91
HPS5Q9UPZ3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.14□□□□□ -1.91
HPS5Q9UPZ3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HPS5Q9UPZ3 MIRLET7F1-201ENST00000362202 87 ntBASIC3.13□□□□□ -1.91
HPS5Q9UPZ3 SNORD21-201ENST00000383953 95 ntBASIC3.13□□□□□ -1.91
HPS5Q9UPZ3 MIR516A2-201ENST00000384888 90 ntBASIC3.13□□□□□ -1.91
HPS5Q9UPZ3 MIR516A1-201ENST00000385033 90 ntBASIC3.13□□□□□ -1.91
HPS5Q9UPZ3 RNU6-205P-201ENST00000390858 107 ntBASIC3.13□□□□□ -1.91
HPS5Q9UPZ3 RNU6-243P-201ENST00000391140 107 ntBASIC3.13□□□□□ -1.91
HPS5Q9UPZ3 HMGN2P39-201ENST00000398005 273 ntBASIC3.13□□□□□ -1.91
HPS5Q9UPZ3 RNA5SP344-201ENST00000411081 104 ntBASIC3.13□□□□□ -1.91
HPS5Q9UPZ3 RNA5SP437-201ENST00000517249 129 ntBASIC3.13□□□□□ -1.91
HPS5Q9UPZ3 MIR4709-201ENST00000577272 72 ntBASIC3.13□□□□□ -1.91
HPS5Q9UPZ3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.13□□□□□ -1.91
HPS5Q9UPZ3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.12□□□□□ -1.91
HPS5Q9UPZ3 RNU6-330P-201ENST00000363015 107 ntBASIC3.12□□□□□ -1.91
HPS5Q9UPZ3 Y_RNA.119-201ENST00000363301 96 ntBASIC3.12□□□□□ -1.91
HPS5Q9UPZ3 SNORD114-30-201ENST00000364448 72 ntBASIC3.12□□□□□ -1.91
HPS5Q9UPZ3 U8.9-201ENST00000365667 134 ntBASIC3.12□□□□□ -1.91
HPS5Q9UPZ3 MIR520A-201ENST00000384862 85 ntBASIC3.12□□□□□ -1.91
HPS5Q9UPZ3 RNU6-466P-201ENST00000391224 103 ntBASIC3.12□□□□□ -1.91
HPS5Q9UPZ3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HPS5Q9UPZ3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.12□□□□□ -1.91
HPS5Q9UPZ3 RNU6-154P-201ENST00000384306 106 ntBASIC3.11□□□□□ -1.91
HPS5Q9UPZ3 MIR597-201ENST00000384968 97 ntBASIC3.11□□□□□ -1.91
HPS5Q9UPZ3 MIR520C-201ENST00000385005 87 ntBASIC3.11□□□□□ -1.91
HPS5Q9UPZ3 MIR518E-201ENST00000385252 88 ntBASIC3.11□□□□□ -1.91
HPS5Q9UPZ3 RNU6-630P-201ENST00000391258 106 ntBASIC3.11□□□□□ -1.91
HPS5Q9UPZ3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.11□□□□□ -1.91
HPS5Q9UPZ3 AC121758.2-201ENST00000553271 193 ntBASIC3.11□□□□□ -1.91
HPS5Q9UPZ3 AC046143.2-201ENST00000609789 160 ntBASIC3.11□□□□□ -1.91
HPS5Q9UPZ3 AC022202.1-201ENST00000613515 211 ntBASIC3.11□□□□□ -1.91
HPS5Q9UPZ3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.11□□□□□ -1.91
HPS5Q9UPZ3 MIR4251-201ENST00000635819 61 ntBASIC3.11□□□□□ -1.91
HPS5Q9UPZ3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
HPS5Q9UPZ3 MIR424-201ENST00000362227 98 ntBASIC3.1□□□□□ -1.91
HPS5Q9UPZ3 HMGN2P23-201ENST00000456759 269 ntBASIC3.1□□□□□ -1.91
HPS5Q9UPZ3 MIR4635-201ENST00000583759 79 ntBASIC3.1□□□□□ -1.91
HPS5Q9UPZ3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HPS5Q9UPZ3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.09□□□□□ -1.91
HPS5Q9UPZ3 SNORD114-1-201ENST00000362705 72 ntBASIC3.09□□□□□ -1.91
HPS5Q9UPZ3 SNORA25.4-201ENST00000363666 124 ntBASIC3.09□□□□□ -1.91
HPS5Q9UPZ3 RNU2-7P-201ENST00000410794 178 ntBASIC3.09□□□□□ -1.91
HPS5Q9UPZ3 snoU13.17-201ENST00000458802 104 ntBASIC3.09□□□□□ -1.91
HPS5Q9UPZ3 snoU13.2-201ENST00000459201 104 ntBASIC3.09□□□□□ -1.91
HPS5Q9UPZ3 RNA5SP445-201ENST00000515889 115 ntBASIC3.09□□□□□ -1.91
HPS5Q9UPZ3 RNU6-56P-201ENST00000516986 93 ntBASIC3.09□□□□□ -1.91
HPS5Q9UPZ3 MIR3935-201ENST00000583472 104 ntBASIC3.09□□□□□ -1.91
HPS5Q9UPZ3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.09□□□□□ -1.92
HPS5Q9UPZ3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.09□□□□□ -1.92
HPS5Q9UPZ3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HPS5Q9UPZ3 AC245517.4-201ENST00000448601 281 ntBASIC3.08□□□□□ -1.92
HPS5Q9UPZ3 snoU13.27-201ENST00000459278 104 ntBASIC3.08□□□□□ -1.92
HPS5Q9UPZ3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HPS5Q9UPZ3 RNU6-291P-201ENST00000384720 107 ntBASIC3.07□□□□□ -1.92
HPS5Q9UPZ3 MIR27B-201ENST00000385129 97 ntBASIC3.07□□□□□ -1.92
HPS5Q9UPZ3 RNU11-3P-201ENST00000391111 133 ntBASIC3.07□□□□□ -1.92
HPS5Q9UPZ3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.07□□□□□ -1.92
HPS5Q9UPZ3 RNVU1-2-201ENST00000516326 135 ntBASIC3.07□□□□□ -1.92
HPS5Q9UPZ3 RNA5SP282-201ENST00000516355 108 ntBASIC3.07□□□□□ -1.92
HPS5Q9UPZ3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HPS5Q9UPZ3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HPS5Q9UPZ3 AL161431.1-201ENST00000618966 4205 ntBASIC3.06□□□□□ -1.92
HPS5Q9UPZ3 RNU6-957P-201ENST00000363652 99 ntBASIC3.06□□□□□ -1.92
HPS5Q9UPZ3 Y_RNA.443-201ENST00000384135 111 ntBASIC3.06□□□□□ -1.92
HPS5Q9UPZ3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HPS5Q9UPZ3 AC244023.1-201ENST00000426884 112 ntBASIC3.06□□□□□ -1.92
HPS5Q9UPZ3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.06□□□□□ -1.92
HPS5Q9UPZ3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.06□□□□□ -1.92
HPS5Q9UPZ3 AC242498.1-201ENST00000604134 111 ntBASIC3.06□□□□□ -1.92
HPS5Q9UPZ3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HPS5Q9UPZ3 Y_RNA.42-201ENST00000362660 108 ntBASIC3.05□□□□□ -1.92
HPS5Q9UPZ3 MIR563-201ENST00000385080 79 ntBASIC3.05□□□□□ -1.92
HPS5Q9UPZ3 RNA5SP210-201ENST00000391034 120 ntBASIC3.05□□□□□ -1.92
HPS5Q9UPZ3 AL096861.1-201ENST00000610899 123 ntBASIC3.05□□□□□ -1.92
HPS5Q9UPZ3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HPS5Q9UPZ3 RNU6-340P-201ENST00000364005 107 ntBASIC3.04□□□□□ -1.92
HPS5Q9UPZ3 SNORD56.5-201ENST00000364281 72 ntBASIC3.04□□□□□ -1.92
HPS5Q9UPZ3 MIR1283-2-201ENST00000408621 87 ntBASIC3.04□□□□□ -1.92
HPS5Q9UPZ3 AL356320.1-201ENST00000429616 163 ntBASIC3.04□□□□□ -1.92
HPS5Q9UPZ3 AC092628.1-201ENST00000436250 252 ntBASIC3.04□□□□□ -1.92
HPS5Q9UPZ3 Z96811.1-201ENST00000445880 108 ntBASIC3.04□□□□□ -1.92
HPS5Q9UPZ3 RNU7-106P-201ENST00000459514 67 ntBASIC3.04□□□□□ -1.92
HPS5Q9UPZ3 RNU7-41P-201ENST00000515917 61 ntBASIC3.04□□□□□ -1.92
HPS5Q9UPZ3 RNA5SP481-201ENST00000516814 122 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms