Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MIR7157-201ENST00000635801 60 ntBASIC3.2□□□□□ -1.9
PDZRN3Q9UPQ7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDZRN3Q9UPQ7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.2□□□□□ -1.9
PDZRN3Q9UPQ7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 Y_RNA.42-201ENST00000362660 108 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 VTRNA1-1-201ENST00000363120 99 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 Y_RNA.371-201ENST00000365591 113 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 RNU6-571P-201ENST00000384128 107 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 RNU6-1237P-201ENST00000384777 107 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 MIR452-201ENST00000385020 85 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 MIR518E-201ENST00000385252 88 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 SNORD123-201ENST00000459473 70 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 RPS27P21-201ENST00000486977 252 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 RNA5SP168-201ENST00000516642 112 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 MIR4500-201ENST00000579472 76 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 AC069503.3-201ENST00000618674 145 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 AL109933.3-201ENST00000619095 188 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 MIR5739-201ENST00000619803 80 ntBASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.19□□□□□ -1.9
PDZRN3Q9UPQ7 RNU6-1079P-201ENST00000362861 110 ntBASIC3.18□□□□□ -1.9
PDZRN3Q9UPQ7 MIR218-1-201ENST00000384999 110 ntBASIC3.18□□□□□ -1.9
PDZRN3Q9UPQ7 RNU6-808P-201ENST00000391233 108 ntBASIC3.18□□□□□ -1.9
PDZRN3Q9UPQ7 SNORA48.11-201ENST00000517015 89 ntBASIC3.18□□□□□ -1.9
PDZRN3Q9UPQ7 MIR1273D-201ENST00000577266 86 ntBASIC3.18□□□□□ -1.9
PDZRN3Q9UPQ7 MIR4764-201ENST00000580680 88 ntBASIC3.18□□□□□ -1.9
PDZRN3Q9UPQ7 AL161722.3-201ENST00000605789 2983 ntBASIC3.18□□□□□ -1.9
PDZRN3Q9UPQ7 MIR8053-201ENST00000613344 75 ntBASIC3.18□□□□□ -1.9
PDZRN3Q9UPQ7 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.18□□□□□ -1.9
PDZRN3Q9UPQ7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PDZRN3Q9UPQ7 DEFA7P-201ENST00000382676 285 ntBASIC3.17□□□□□ -1.9
PDZRN3Q9UPQ7 AL359511.1-201ENST00000402970 211 ntBASIC3.17□□□□□ -1.9
PDZRN3Q9UPQ7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC3.17□□□□□ -1.9
PDZRN3Q9UPQ7 WWP1P1-201ENST00000466609 2769 ntBASIC3.16□□□□□ -1.9
PDZRN3Q9UPQ7 SNORD45.1-201ENST00000363181 77 ntBASIC3.16□□□□□ -1.9
PDZRN3Q9UPQ7 SNORD113.1-201ENST00000363280 73 ntBASIC3.16□□□□□ -1.9
PDZRN3Q9UPQ7 BX276092.1-201ENST00000427368 251 ntBASIC3.16□□□□□ -1.9
PDZRN3Q9UPQ7 RNU7-12P-201ENST00000516030 62 ntBASIC3.16□□□□□ -1.9
PDZRN3Q9UPQ7 AC138749.4-201ENST00000563970 127 ntBASIC3.16□□□□□ -1.9
PDZRN3Q9UPQ7 AC141846.1-201ENST00000568348 142 ntBASIC3.16□□□□□ -1.9
PDZRN3Q9UPQ7 MIR5092-201ENST00000583139 88 ntBASIC3.16□□□□□ -1.9
PDZRN3Q9UPQ7 AC010297.1-201ENST00000623948 149 ntBASIC3.16□□□□□ -1.9
PDZRN3Q9UPQ7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDZRN3Q9UPQ7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.15□□□□□ -1.9
PDZRN3Q9UPQ7 Y_RNA.207-201ENST00000364142 106 ntBASIC3.15□□□□□ -1.91
PDZRN3Q9UPQ7 MIR516A2-201ENST00000384888 90 ntBASIC3.15□□□□□ -1.91
PDZRN3Q9UPQ7 MIR516A1-201ENST00000385033 90 ntBASIC3.15□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-482P-201ENST00000391068 107 ntBASIC3.15□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-667P-201ENST00000517186 102 ntBASIC3.15□□□□□ -1.91
PDZRN3Q9UPQ7 AC015712.3-201ENST00000559380 164 ntBASIC3.15□□□□□ -1.91
PDZRN3Q9UPQ7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.15□□□□□ -1.91
PDZRN3Q9UPQ7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDZRN3Q9UPQ7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-446P-201ENST00000362827 106 ntBASIC3.14□□□□□ -1.91
PDZRN3Q9UPQ7 Y_RNA.99-201ENST00000363138 105 ntBASIC3.14□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-936P-201ENST00000384005 107 ntBASIC3.14□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-1067P-201ENST00000384752 107 ntBASIC3.14□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-1254P-201ENST00000391266 104 ntBASIC3.14□□□□□ -1.91
PDZRN3Q9UPQ7 HSPE1P9-201ENST00000440046 311 ntBASIC3.14□□□□□ -1.91
PDZRN3Q9UPQ7 AC104389.3-201ENST00000445629 235 ntBASIC3.14□□□□□ -1.91
PDZRN3Q9UPQ7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.14□□□□□ -1.91
PDZRN3Q9UPQ7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC3.14□□□□□ -1.91
PDZRN3Q9UPQ7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDZRN3Q9UPQ7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.13□□□□□ -1.91
PDZRN3Q9UPQ7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.13□□□□□ -1.91
PDZRN3Q9UPQ7 MIR6073-201ENST00000352083 89 ntBASIC3.13□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-1051P-201ENST00000365471 102 ntBASIC3.13□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-1184P-201ENST00000384588 108 ntBASIC3.13□□□□□ -1.91
PDZRN3Q9UPQ7 Y_RNA.606-201ENST00000410579 103 ntBASIC3.13□□□□□ -1.91
PDZRN3Q9UPQ7 AL691482.2-201ENST00000457453 84 ntBASIC3.13□□□□□ -1.91
PDZRN3Q9UPQ7 CYP2C59P-201ENST00000457790 269 ntBASIC3.13□□□□□ -1.91
PDZRN3Q9UPQ7 AC016717.2-201ENST00000609089 5141 ntBASIC3.13□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-369P-201ENST00000362515 102 ntBASIC3.12□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-1187P-201ENST00000364771 110 ntBASIC3.12□□□□□ -1.91
PDZRN3Q9UPQ7 RNA5SP117-201ENST00000365294 118 ntBASIC3.12□□□□□ -1.91
PDZRN3Q9UPQ7 RNA5SP181-201ENST00000410246 98 ntBASIC3.12□□□□□ -1.91
PDZRN3Q9UPQ7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDZRN3Q9UPQ7 MAPK10-266ENST00000641066 6555 ntBASIC3.12□□□□□ -1.91
PDZRN3Q9UPQ7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDZRN3Q9UPQ7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
PDZRN3Q9UPQ7 MIR526A1-201ENST00000384897 85 ntBASIC3.11□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-243P-201ENST00000391140 107 ntBASIC3.11□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-466P-201ENST00000391224 103 ntBASIC3.11□□□□□ -1.91
PDZRN3Q9UPQ7 AC108210.2-201ENST00000503681 201 ntBASIC3.11□□□□□ -1.91
PDZRN3Q9UPQ7 MIR3199-1-201ENST00000582434 88 ntBASIC3.11□□□□□ -1.91
PDZRN3Q9UPQ7 AC092634.7-201ENST00000621022 103 ntBASIC3.11□□□□□ -1.91
PDZRN3Q9UPQ7 FO624990.1-201ENST00000636373 85 ntBASIC3.11□□□□□ -1.91
PDZRN3Q9UPQ7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-957P-201ENST00000363652 99 ntBASIC3.1□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-1072P-201ENST00000384703 107 ntBASIC3.1□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-443P-201ENST00000384780 107 ntBASIC3.1□□□□□ -1.91
PDZRN3Q9UPQ7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PDZRN3Q9UPQ7 AC027119.1-201ENST00000440877 241 ntBASIC3.1□□□□□ -1.91
PDZRN3Q9UPQ7 CKS1BP2-201ENST00000497342 240 ntBASIC3.1□□□□□ -1.91
PDZRN3Q9UPQ7 AL137847.3-201ENST00000611521 109 ntBASIC3.1□□□□□ -1.91
PDZRN3Q9UPQ7 AC022513.1-201ENST00000624512 117 ntBASIC3.1□□□□□ -1.91
PDZRN3Q9UPQ7 ZNF209P-201ENST00000593450 2304 ntBASIC3.1□□□□□ -1.91
PDZRN3Q9UPQ7 AC131280.1-202ENST00000624067 4211 ntBASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms