Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SNORA31.9-201ENST00000516429 84 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORA67.7-201ENST00000516664 135 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 RN7SKP260-201ENST00000516907 149 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR3939-201ENST00000582614 106 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 AL137849.1-201ENST00000604767 169 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 AL138721.1-201ENST00000616756 179 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR6830-201ENST00000636015 70 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 Z95114.1-201ENST00000624264 14574 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU1-94P-201ENST00000362627 173 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 Y_RNA.99-201ENST00000363138 105 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 RNA5SP447-201ENST00000363749 119 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 RNVU1-6-201ENST00000364688 164 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU6-1083P-201ENST00000384022 107 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 Y_RNA.434-201ENST00000384090 100 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR192-201ENST00000384915 110 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR449B-201ENST00000384995 97 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR124-1-201ENST00000385275 85 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 JTBP1-201ENST00000441314 247 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 RNA5SP233-201ENST00000459153 113 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORD125-201ENST00000459538 96 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 RPS26P3-201ENST00000470205 348 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 RPS29P22-201ENST00000472363 168 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 RPS26P15-201ENST00000488067 348 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 RN7SL274P-201ENST00000492268 272 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 KRTAP5-14P-201ENST00000502328 121 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 HMGB1P22-201ENST00000505315 124 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU6-1191P-201ENST00000516799 107 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 IGKV2-26-201ENST00000518305 343 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 AC091042.1-201ENST00000579213 173 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR548AE1-201ENST00000583292 70 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR4715-201ENST00000584117 79 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 AC022726.1-201ENST00000587475 207 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 AC011447.4-201ENST00000587562 111 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 AC021506.2-201ENST00000612354 169 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR6839-201ENST00000620425 113 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR7641-1-201ENST00000627518 61 ntBASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
KRTAP4-4Q9BYR3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORA71.3-201ENST00000362582 128 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORD115-23-201ENST00000364461 82 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU1-93P-201ENST00000364704 169 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORA62-201ENST00000365493 153 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 RNY1P8-201ENST00000383970 114 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 Y_RNA.433-201ENST00000384089 102 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORA8.2-201ENST00000384372 139 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORA37-201ENST00000384504 129 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR1193-201ENST00000408109 78 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU2-48P-201ENST00000410694 191 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 AC244090.1-201ENST00000441884 93 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 snoU13.24-201ENST00000458998 104 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 RN7SL197P-201ENST00000466981 299 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 RN7SL385P-201ENST00000468873 276 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORD111.1-201ENST00000516421 86 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU6-782P-201ENST00000516852 104 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR4737-201ENST00000583979 81 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 AC244669.1-204ENST00000621564 178 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 AC091912.2-201ENST00000624798 167 ntBASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms