Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 MIR424-201ENST00000362227 98 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 RNU6-661P-201ENST00000362409 107 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 RNU6-60P-201ENST00000364792 103 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.316-201ENST00000365118 111 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.370-201ENST00000365589 108 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 SNORA24-201ENST00000384096 131 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 SNORA70.7-201ENST00000384159 133 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.494-201ENST00000384432 111 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 RNA5SP100-201ENST00000410903 110 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 RNA5SP59-201ENST00000410922 110 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 AC099513.1-201ENST00000490423 301 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 SCARNA23-201ENST00000516060 130 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 MIR2052-201ENST00000636055 55 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.82□□□□□ -2.12
SALL3Q9BXA9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.10-201ENST00000362371 110 ntBASIC1.81□□□□□ -2.12
SALL3Q9BXA9 RNU6-1319P-201ENST00000390855 104 ntBASIC1.81□□□□□ -2.12
SALL3Q9BXA9 RNU6-747P-201ENST00000390928 104 ntBASIC1.81□□□□□ -2.12
SALL3Q9BXA9 RNU6-241P-201ENST00000391148 104 ntBASIC1.81□□□□□ -2.12
SALL3Q9BXA9 RNU6-177P-201ENST00000411257 104 ntBASIC1.81□□□□□ -2.12
SALL3Q9BXA9 RNU7-123P-201ENST00000515911 60 ntBASIC1.81□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.659-201ENST00000515994 113 ntBASIC1.81□□□□□ -2.12
SALL3Q9BXA9 RNU2-35P-201ENST00000516446 142 ntBASIC1.81□□□□□ -2.12
SALL3Q9BXA9 RNU7-181P-201ENST00000517234 74 ntBASIC1.81□□□□□ -2.12
SALL3Q9BXA9 AC090821.2-201ENST00000523552 176 ntBASIC1.81□□□□□ -2.12
SALL3Q9BXA9 MIR3163-201ENST00000581592 73 ntBASIC1.81□□□□□ -2.12
SALL3Q9BXA9 RNU6-170P-201ENST00000362832 104 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 RNU6-414P-201ENST00000363705 104 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 SNORD115-27-201ENST00000364430 82 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.386-201ENST00000383913 105 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 MIR548D2-201ENST00000384955 97 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 MIR517C-201ENST00000385103 95 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 MIR577-201ENST00000385196 96 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 RNU4-62P-201ENST00000410125 130 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 RNA5SP144-201ENST00000410846 116 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.8□□□□□ -2.12
SALL3Q9BXA9 AC004941.2-201ENST00000427009 228 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 SNORA31.4-201ENST00000516049 129 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 RNA5SP61-201ENST00000516453 100 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.8□□□□□ -2.12
SALL3Q9BXA9 MIR3152-201ENST00000579801 74 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 MIR4712-201ENST00000583750 82 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 AC021613.1-201ENST00000623880 111 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 MIR548BB-201ENST00000626714 66 ntBASIC1.8□□□□□ -2.12
SALL3Q9BXA9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.79□□□□□ -2.12
SALL3Q9BXA9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SALL3Q9BXA9 RNU6-1067P-201ENST00000384752 107 ntBASIC1.79□□□□□ -2.12
SALL3Q9BXA9 MIR1304-201ENST00000408243 91 ntBASIC1.79□□□□□ -2.12
SALL3Q9BXA9 MIR1276-201ENST00000408707 83 ntBASIC1.79□□□□□ -2.12
SALL3Q9BXA9 RNA5SP261-201ENST00000410536 106 ntBASIC1.79□□□□□ -2.12
SALL3Q9BXA9 RNU2-11P-201ENST00000459191 187 ntBASIC1.79□□□□□ -2.12
SALL3Q9BXA9 RNU7-34P-201ENST00000459394 64 ntBASIC1.79□□□□□ -2.12
SALL3Q9BXA9 RNU7-53P-201ENST00000516705 60 ntBASIC1.79□□□□□ -2.12
SALL3Q9BXA9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.79□□□□□ -2.12
SALL3Q9BXA9 MIR4668-201ENST00000582284 70 ntBASIC1.79□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.773-201ENST00000607168 90 ntBASIC1.79□□□□□ -2.12
SALL3Q9BXA9 SNORD3E-202ENST00000627253 216 ntBASIC1.79□□□□□ -2.12
SALL3Q9BXA9 MIR1255B1-201ENST00000636325 63 ntBASIC1.79□□□□□ -2.12
SALL3Q9BXA9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SALL3Q9BXA9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SALL3Q9BXA9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SALL3Q9BXA9 MIR342-201ENST00000362212 99 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 SNORD115-2-201ENST00000362842 82 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.299-201ENST00000364973 94 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 SNORD115-20-201ENST00000365099 82 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.467-201ENST00000384297 102 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 RNU6-616P-201ENST00000384353 107 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.537-201ENST00000384626 109 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 AL022718.1-201ENST00000412004 84 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 RPL31P63-201ENST00000422565 375 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 AC093850.1-201ENST00000454121 251 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 RNU7-73P-201ENST00000458743 63 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 AC113410.1-201ENST00000505029 247 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 AC114801.3-201ENST00000510231 177 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 DEFB131E-201ENST00000532329 154 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 HSPE1P19-201ENST00000603327 295 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 AL162726.3-218ENST00000636401 95 ntBASIC1.78□□□□□ -2.12
SALL3Q9BXA9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 RNU1-42P-201ENST00000364033 160 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 Y_RNA.430-201ENST00000384081 110 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 Y_RNA.531-201ENST00000384589 121 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 MIR605-201ENST00000385078 83 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 MIR516B2-201ENST00000385190 85 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 AC096949.1-201ENST00000412047 152 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 POLR2J4-204ENST00000418424 324 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 SNX2P2-201ENST00000424553 323 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 AL354695.1-201ENST00000427935 228 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 SNORD123-201ENST00000459473 70 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 MIR548AR-201ENST00000582191 57 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 AC087741.2-201ENST00000619415 172 ntBASIC1.77□□□□□ -2.13
SALL3Q9BXA9 SNORD114-26-201ENST00000363543 72 ntBASIC1.76□□□□□ -2.13
SALL3Q9BXA9 RNU6-392P-201ENST00000364926 101 ntBASIC1.76□□□□□ -2.13
SALL3Q9BXA9 RNY1P4-201ENST00000384595 115 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 213 ms