Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU6-904P-201ENST00000516206 101 ntBASIC1.62□□□□□ -2.15
NDC1Q9BTX1 Y_RNA.694-201ENST00000516677 117 ntBASIC1.62□□□□□ -2.15
NDC1Q9BTX1 RNU7-35P-201ENST00000517174 62 ntBASIC1.62□□□□□ -2.15
NDC1Q9BTX1 MIR4422-201ENST00000581938 83 ntBASIC1.62□□□□□ -2.15
NDC1Q9BTX1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
NDC1Q9BTX1 SNORA25.3-201ENST00000363205 127 ntBASIC1.61□□□□□ -2.15
NDC1Q9BTX1 MIR1302-7-201ENST00000408841 72 ntBASIC1.61□□□□□ -2.15
NDC1Q9BTX1 AL353813.1-201ENST00000440700 253 ntBASIC1.61□□□□□ -2.15
NDC1Q9BTX1 snoU13.25-201ENST00000458945 104 ntBASIC1.61□□□□□ -2.15
NDC1Q9BTX1 DEFB131E-201ENST00000532329 154 ntBASIC1.61□□□□□ -2.15
NDC1Q9BTX1 FAM71BP1-201ENST00000604431 523 ntBASIC1.61□□□□□ -2.15
NDC1Q9BTX1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.61□□□□□ -2.15
NDC1Q9BTX1 snoU13.31-201ENST00000607291 104 ntBASIC1.61□□□□□ -2.15
NDC1Q9BTX1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
NDC1Q9BTX1 RNU6-1255P-201ENST00000363434 112 ntBASIC1.6□□□□□ -2.15
NDC1Q9BTX1 RNU6-1099P-201ENST00000363533 107 ntBASIC1.6□□□□□ -2.15
NDC1Q9BTX1 Y_RNA.544-201ENST00000384650 113 ntBASIC1.6□□□□□ -2.15
NDC1Q9BTX1 RNU6-1237P-201ENST00000384777 107 ntBASIC1.6□□□□□ -2.15
NDC1Q9BTX1 MIR577-201ENST00000385196 96 ntBASIC1.6□□□□□ -2.15
NDC1Q9BTX1 RNU6-679P-201ENST00000391003 106 ntBASIC1.6□□□□□ -2.15
NDC1Q9BTX1 MIR934-201ENST00000401241 83 ntBASIC1.6□□□□□ -2.15
NDC1Q9BTX1 RPL31P63-201ENST00000422565 375 ntBASIC1.6□□□□□ -2.15
NDC1Q9BTX1 RNU6-521P-201ENST00000516663 105 ntBASIC1.6□□□□□ -2.15
NDC1Q9BTX1 MIR4255-201ENST00000579351 72 ntBASIC1.6□□□□□ -2.15
NDC1Q9BTX1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
NDC1Q9BTX1 RNU6-640P-201ENST00000363693 105 ntBASIC1.59□□□□□ -2.15
NDC1Q9BTX1 RNU4-36P-201ENST00000364294 144 ntBASIC1.59□□□□□ -2.15
NDC1Q9BTX1 RNY4P30-201ENST00000410216 95 ntBASIC1.59□□□□□ -2.15
NDC1Q9BTX1 BTF3P4-201ENST00000418852 495 ntBASIC1.59□□□□□ -2.15
NDC1Q9BTX1 AC244023.1-201ENST00000426884 112 ntBASIC1.59□□□□□ -2.15
NDC1Q9BTX1 AC245517.4-201ENST00000448601 281 ntBASIC1.59□□□□□ -2.15
NDC1Q9BTX1 RNU7-79P-201ENST00000516082 62 ntBASIC1.59□□□□□ -2.15
NDC1Q9BTX1 SNORA40.13-201ENST00000516379 120 ntBASIC1.59□□□□□ -2.15
NDC1Q9BTX1 MIR3664-201ENST00000579074 99 ntBASIC1.59□□□□□ -2.15
NDC1Q9BTX1 MIR5582-201ENST00000579697 68 ntBASIC1.59□□□□□ -2.15
NDC1Q9BTX1 AC242498.1-201ENST00000604134 111 ntBASIC1.59□□□□□ -2.15
NDC1Q9BTX1 Y_RNA.818-201ENST00000618813 71 ntBASIC1.59□□□□□ -2.15
NDC1Q9BTX1 RNY3P2-201ENST00000362918 102 ntBASIC1.58□□□□□ -2.16
NDC1Q9BTX1 RNU6-1086P-201ENST00000410930 100 ntBASIC1.58□□□□□ -2.16
NDC1Q9BTX1 AL512310.8-201ENST00000550183 120 ntBASIC1.58□□□□□ -2.16
NDC1Q9BTX1 MIR4694-201ENST00000578534 80 ntBASIC1.58□□□□□ -2.16
NDC1Q9BTX1 MIR4781-201ENST00000585250 76 ntBASIC1.58□□□□□ -2.16
NDC1Q9BTX1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NDC1Q9BTX1 RNU6-832P-201ENST00000363319 107 ntBASIC1.57□□□□□ -2.16
NDC1Q9BTX1 SNORD48-201ENST00000364953 64 ntBASIC1.57□□□□□ -2.16
NDC1Q9BTX1 SNORD115-35-201ENST00000365122 82 ntBASIC1.57□□□□□ -2.16
NDC1Q9BTX1 MIR206-201ENST00000384872 86 ntBASIC1.57□□□□□ -2.16
NDC1Q9BTX1 SNORA67.5-201ENST00000391036 107 ntBASIC1.57□□□□□ -2.16
NDC1Q9BTX1 RNU4-62P-201ENST00000410125 130 ntBASIC1.57□□□□□ -2.16
NDC1Q9BTX1 AL133373.1-201ENST00000497098 94 ntBASIC1.57□□□□□ -2.16
NDC1Q9BTX1 RNU7-2P-201ENST00000516096 62 ntBASIC1.57□□□□□ -2.16
NDC1Q9BTX1 SNORD67.1-201ENST00000516618 108 ntBASIC1.57□□□□□ -2.16
NDC1Q9BTX1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
NDC1Q9BTX1 RNU6-396P-201ENST00000365369 105 ntBASIC1.56□□□□□ -2.16
NDC1Q9BTX1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
NDC1Q9BTX1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.56□□□□□ -2.16
NDC1Q9BTX1 RPS27P16-201ENST00000425758 201 ntBASIC1.56□□□□□ -2.16
NDC1Q9BTX1 SCARNA23-201ENST00000516060 130 ntBASIC1.56□□□□□ -2.16
NDC1Q9BTX1 RNU6-1018P-201ENST00000516577 106 ntBASIC1.56□□□□□ -2.16
NDC1Q9BTX1 AP003716.2-201ENST00000528260 108 ntBASIC1.56□□□□□ -2.16
NDC1Q9BTX1 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
NDC1Q9BTX1 MIR4303-201ENST00000581299 66 ntBASIC1.56□□□□□ -2.16
NDC1Q9BTX1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
NDC1Q9BTX1 RNU6-1201P-201ENST00000384227 107 ntBASIC1.55□□□□□ -2.16
NDC1Q9BTX1 RNU6-1307P-201ENST00000391012 103 ntBASIC1.55□□□□□ -2.16
NDC1Q9BTX1 Y_RNA.601-201ENST00000410500 113 ntBASIC1.55□□□□□ -2.16
NDC1Q9BTX1 MTATP8P2-201ENST00000435212 202 ntBASIC1.55□□□□□ -2.16
NDC1Q9BTX1 RNU6-902P-201ENST00000517212 91 ntBASIC1.55□□□□□ -2.16
NDC1Q9BTX1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.55□□□□□ -2.16
NDC1Q9BTX1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
NDC1Q9BTX1 AL512310.12-203ENST00000640543 90 ntBASIC1.55□□□□□ -2.16
NDC1Q9BTX1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.54□□□□□ -2.16
NDC1Q9BTX1 Y_RNA.93-201ENST00000363066 109 ntBASIC1.54□□□□□ -2.16
NDC1Q9BTX1 RNY1P13-201ENST00000365030 105 ntBASIC1.54□□□□□ -2.16
NDC1Q9BTX1 MIR1185-1-201ENST00000408598 86 ntBASIC1.54□□□□□ -2.16
NDC1Q9BTX1 RNA5SP237-201ENST00000410414 113 ntBASIC1.54□□□□□ -2.16
NDC1Q9BTX1 snoU13.2-201ENST00000459201 104 ntBASIC1.54□□□□□ -2.16
NDC1Q9BTX1 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
NDC1Q9BTX1 AC141846.1-201ENST00000568348 142 ntBASIC1.54□□□□□ -2.16
NDC1Q9BTX1 AC105081.1-201ENST00000617727 106 ntBASIC1.54□□□□□ -2.16
NDC1Q9BTX1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.54□□□□□ -2.16
NDC1Q9BTX1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NDC1Q9BTX1 MIR337-201ENST00000362281 93 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 Y_RNA.10-201ENST00000362371 110 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 RNU6-1313P-201ENST00000362622 102 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 Y_RNA.107-201ENST00000363190 121 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 MIR588-201ENST00000384900 83 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 RNU6-321P-201ENST00000410912 106 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.53□□□□□ -2.16
NDC1Q9BTX1 AP1B1P2-201ENST00000416196 106 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 RNU7-137P-201ENST00000516788 62 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 RN7SKP88-201ENST00000516847 250 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 RNU6-158P-201ENST00000517104 100 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 RNU6-165P-201ENST00000517170 99 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 7SK.8-201ENST00000612110 250 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 AL442128.1-201ENST00000615151 90 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 7SK.11-201ENST00000615477 250 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 AL662814.1-201ENST00000617364 121 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 7SK.13-201ENST00000622040 250 ntBASIC1.53□□□□□ -2.16
NDC1Q9BTX1 AL161722.3-201ENST00000605789 2983 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 292.4 ms