Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 SCARNA23-201ENST00000516060 130 ntBASIC1.5□□□□□ -2.17
TIMP4Q99727 RNU7-79P-201ENST00000516082 62 ntBASIC1.5□□□□□ -2.17
TIMP4Q99727 PRELID3BP2-201ENST00000605362 201 ntBASIC1.5□□□□□ -2.17
TIMP4Q99727 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
TIMP4Q99727 Y_RNA.818-201ENST00000618813 71 ntBASIC1.5□□□□□ -2.17
TIMP4Q99727 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
TIMP4Q99727 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
TIMP4Q99727 RNU6-832P-201ENST00000363319 107 ntBASIC1.49□□□□□ -2.17
TIMP4Q99727 RNA5SP48-201ENST00000363969 126 ntBASIC1.49□□□□□ -2.17
TIMP4Q99727 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.49□□□□□ -2.17
TIMP4Q99727 MIR4694-201ENST00000578534 80 ntBASIC1.49□□□□□ -2.17
TIMP4Q99727 AL357312.1-201ENST00000603879 298 ntBASIC1.49□□□□□ -2.17
TIMP4Q99727 AC105081.1-201ENST00000617727 106 ntBASIC1.49□□□□□ -2.17
TIMP4Q99727 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.49□□□□□ -2.17
TIMP4Q99727 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
TIMP4Q99727 Y_RNA.107-201ENST00000363190 121 ntBASIC1.48□□□□□ -2.17
TIMP4Q99727 SNORD115-35-201ENST00000365122 82 ntBASIC1.48□□□□□ -2.17
TIMP4Q99727 Y_RNA.369-201ENST00000365568 117 ntBASIC1.48□□□□□ -2.17
TIMP4Q99727 MIR934-201ENST00000401241 83 ntBASIC1.48□□□□□ -2.17
TIMP4Q99727 RNA5SP237-201ENST00000410414 113 ntBASIC1.48□□□□□ -2.17
TIMP4Q99727 Y_RNA.601-201ENST00000410500 113 ntBASIC1.48□□□□□ -2.17
TIMP4Q99727 MTATP8P2-201ENST00000435212 202 ntBASIC1.48□□□□□ -2.17
TIMP4Q99727 RNU6-795P-201ENST00000516323 103 ntBASIC1.48□□□□□ -2.17
TIMP4Q99727 SNORD67.1-201ENST00000516618 108 ntBASIC1.48□□□□□ -2.17
TIMP4Q99727 RNU7-35P-201ENST00000517174 62 ntBASIC1.48□□□□□ -2.17
TIMP4Q99727 MIR4285-201ENST00000581001 85 ntBASIC1.48□□□□□ -2.17
TIMP4Q99727 SNORD1A-201ENST00000364968 72 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 MIR488-201ENST00000365739 83 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 RNU6-49P-201ENST00000384256 107 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 MIR206-201ENST00000384872 86 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 AC244023.1-201ENST00000426884 112 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 AC027119.1-201ENST00000440877 241 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 RPL39P39-201ENST00000455840 151 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 AC079140.2-201ENST00000506193 142 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 Y_RNA.659-201ENST00000515994 113 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 RNU7-2P-201ENST00000516096 62 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 MIR3198-2-201ENST00000577868 80 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 MIR548Z-201ENST00000584743 97 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 AC242498.1-201ENST00000604134 111 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 AC012531.4-201ENST00000616509 177 ntBASIC1.47□□□□□ -2.17
TIMP4Q99727 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
TIMP4Q99727 Y_RNA.10-201ENST00000362371 110 ntBASIC1.46□□□□□ -2.18
TIMP4Q99727 RNY1P7-201ENST00000384743 110 ntBASIC1.46□□□□□ -2.18
TIMP4Q99727 MIR30A-201ENST00000385092 71 ntBASIC1.46□□□□□ -2.18
TIMP4Q99727 RNU6-1307P-201ENST00000391012 103 ntBASIC1.46□□□□□ -2.18
TIMP4Q99727 snoU13.25-201ENST00000458945 104 ntBASIC1.46□□□□□ -2.18
TIMP4Q99727 MIR3937-201ENST00000580135 106 ntBASIC1.46□□□□□ -2.18
TIMP4Q99727 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.46□□□□□ -2.18
TIMP4Q99727 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TIMP4Q99727 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
TIMP4Q99727 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TIMP4Q99727 Y_RNA.93-201ENST00000363066 109 ntBASIC1.45□□□□□ -2.18
TIMP4Q99727 RNU6-396P-201ENST00000365369 105 ntBASIC1.45□□□□□ -2.18
TIMP4Q99727 Y_RNA.448-201ENST00000384185 108 ntBASIC1.45□□□□□ -2.18
TIMP4Q99727 RNU6-1201P-201ENST00000384227 107 ntBASIC1.45□□□□□ -2.18
TIMP4Q99727 MIR1302-7-201ENST00000408841 72 ntBASIC1.45□□□□□ -2.18
TIMP4Q99727 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.45□□□□□ -2.18
TIMP4Q99727 SNORA44.1-201ENST00000517031 108 ntBASIC1.45□□□□□ -2.18
TIMP4Q99727 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.45□□□□□ -2.18
TIMP4Q99727 MIR4303-201ENST00000581299 66 ntBASIC1.45□□□□□ -2.18
TIMP4Q99727 MIR2052-201ENST00000636055 55 ntBASIC1.45□□□□□ -2.18
TIMP4Q99727 AC091304.10-201ENST00000641554 121 ntBASIC1.45□□□□□ -2.18
TIMP4Q99727 RNU6-170P-201ENST00000362832 104 ntBASIC1.44□□□□□ -2.18
TIMP4Q99727 RNU6-294P-201ENST00000364999 102 ntBASIC1.44□□□□□ -2.18
TIMP4Q99727 MIR588-201ENST00000384900 83 ntBASIC1.44□□□□□ -2.18
TIMP4Q99727 RNU6-205P-201ENST00000390858 107 ntBASIC1.44□□□□□ -2.18
TIMP4Q99727 RNU6-644P-201ENST00000391155 98 ntBASIC1.44□□□□□ -2.18
TIMP4Q99727 RNU4-62P-201ENST00000410125 130 ntBASIC1.44□□□□□ -2.18
TIMP4Q99727 UBL5P1-201ENST00000507979 193 ntBASIC1.44□□□□□ -2.18
TIMP4Q99727 AC108729.3-201ENST00000513484 108 ntBASIC1.44□□□□□ -2.18
TIMP4Q99727 RNU6-1018P-201ENST00000516577 106 ntBASIC1.44□□□□□ -2.18
TIMP4Q99727 AC141846.1-201ENST00000568348 142 ntBASIC1.44□□□□□ -2.18
TIMP4Q99727 SNORD53B-201ENST00000577887 78 ntBASIC1.44□□□□□ -2.18
TIMP4Q99727 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.44□□□□□ -2.18
TIMP4Q99727 AL442128.1-201ENST00000615151 90 ntBASIC1.44□□□□□ -2.18
TIMP4Q99727 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TIMP4Q99727 MIR378A-201ENST00000362177 66 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 MIR302D-201ENST00000362275 68 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 RNU6-1313P-201ENST00000362622 102 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 Y_RNA.247-201ENST00000364500 92 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 RNU6-865P-201ENST00000364772 107 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 RNY1P13-201ENST00000365030 105 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 BTF3P4-201ENST00000418852 495 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 AL133373.1-201ENST00000497098 94 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 RNU7-61P-201ENST00000515897 61 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 RNU6-162P-201ENST00000516228 103 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 RNU7-137P-201ENST00000516788 62 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 MALAT1.1-201ENST00000618249 95 ntBASIC1.43□□□□□ -2.18
TIMP4Q99727 Y_RNA.220-201ENST00000364244 109 ntBASIC1.42□□□□□ -2.18
TIMP4Q99727 SNORD45B-201ENST00000364617 72 ntBASIC1.42□□□□□ -2.18
TIMP4Q99727 Y_RNA.342-201ENST00000365352 113 ntBASIC1.42□□□□□ -2.18
TIMP4Q99727 MIR34C-201ENST00000384831 77 ntBASIC1.42□□□□□ -2.18
TIMP4Q99727 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.42□□□□□ -2.18
TIMP4Q99727 RNU6-1321P-201ENST00000390905 107 ntBASIC1.42□□□□□ -2.18
TIMP4Q99727 RPS29P28-201ENST00000446439 141 ntBASIC1.42□□□□□ -2.18
TIMP4Q99727 snoU13.2-201ENST00000459201 104 ntBASIC1.42□□□□□ -2.18
TIMP4Q99727 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
TIMP4Q99727 AP000753.3-201ENST00000604083 169 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms