Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.1□□□□□ -2.43
UFD1Q92890 AL117351.2-201ENST00000513571 157 ntBASIC-0.1□□□□□ -2.43
UFD1Q92890 MIR4305-201ENST00000583252 102 ntBASIC-0.1□□□□□ -2.43
UFD1Q92890 RNU6-302P-201ENST00000365249 107 ntBASIC-0.11□□□□□ -2.43
UFD1Q92890 RNA5SP128-201ENST00000365305 116 ntBASIC-0.11□□□□□ -2.43
UFD1Q92890 RNA5SP127-201ENST00000411051 133 ntBASIC-0.11□□□□□ -2.43
UFD1Q92890 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.11□□□□□ -2.43
UFD1Q92890 AP003072.1-201ENST00000531740 145 ntBASIC-0.11□□□□□ -2.43
UFD1Q92890 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.11□□□□□ -2.43
UFD1Q92890 MTND5P32-201ENST00000560711 1802 ntBASIC-0.12□□□□□ -2.43
UFD1Q92890 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.12□□□□□ -2.43
UFD1Q92890 MIR643-201ENST00000385267 97 ntBASIC-0.12□□□□□ -2.43
UFD1Q92890 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.12□□□□□ -2.43
UFD1Q92890 RNA5SP63-201ENST00000391225 112 ntBASIC-0.12□□□□□ -2.43
UFD1Q92890 AL121914.1-201ENST00000450188 156 ntBASIC-0.12□□□□□ -2.43
UFD1Q92890 RNU7-79P-201ENST00000516082 62 ntBASIC-0.12□□□□□ -2.43
UFD1Q92890 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.12□□□□□ -2.43
UFD1Q92890 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.12□□□□□ -2.43
UFD1Q92890 DEFB131E-201ENST00000532329 154 ntBASIC-0.12□□□□□ -2.43
UFD1Q92890 MIR378D2-201ENST00000580636 98 ntBASIC-0.12□□□□□ -2.43
UFD1Q92890 MIR8087-201ENST00000612745 78 ntBASIC-0.12□□□□□ -2.43
UFD1Q92890 RNU4-58P-201ENST00000363192 141 ntBASIC-0.13□□□□□ -2.43
UFD1Q92890 SNORD114-26-201ENST00000363543 72 ntBASIC-0.13□□□□□ -2.43
UFD1Q92890 SNORA33.2-201ENST00000365413 134 ntBASIC-0.13□□□□□ -2.43
UFD1Q92890 RNU6-639P-201ENST00000384074 107 ntBASIC-0.13□□□□□ -2.43
UFD1Q92890 MIR624-201ENST00000385217 97 ntBASIC-0.13□□□□□ -2.43
UFD1Q92890 MIR1197-201ENST00000408818 88 ntBASIC-0.13□□□□□ -2.43
UFD1Q92890 RNU6-531P-201ENST00000516694 104 ntBASIC-0.13□□□□□ -2.43
UFD1Q92890 AC141557.1-201ENST00000540982 400 ntBASIC-0.13□□□□□ -2.43
UFD1Q92890 MIR4752-201ENST00000579672 72 ntBASIC-0.13□□□□□ -2.43
UFD1Q92890 AL356055.1-201ENST00000602528 446 ntBASIC-0.13□□□□□ -2.43
UFD1Q92890 MIR330-201ENST00000362196 94 ntBASIC-0.14□□□□□ -2.43
UFD1Q92890 RNA5SP325-201ENST00000363756 130 ntBASIC-0.14□□□□□ -2.43
UFD1Q92890 RNA5SP245-201ENST00000364239 121 ntBASIC-0.14□□□□□ -2.43
UFD1Q92890 SNORA2A-201ENST00000383885 135 ntBASIC-0.14□□□□□ -2.43
UFD1Q92890 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.14□□□□□ -2.43
UFD1Q92890 MIR145-201ENST00000384967 88 ntBASIC-0.14□□□□□ -2.43
UFD1Q92890 RNU7-35P-201ENST00000517174 62 ntBASIC-0.14□□□□□ -2.43
UFD1Q92890 AP001094.1-201ENST00000579805 193 ntBASIC-0.14□□□□□ -2.43
UFD1Q92890 MIR5190-201ENST00000581537 80 ntBASIC-0.14□□□□□ -2.43
UFD1Q92890 MIR4744-201ENST00000581563 82 ntBASIC-0.14□□□□□ -2.43
UFD1Q92890 RNA5SP133-201ENST00000363368 119 ntBASIC-0.15□□□□□ -2.43
UFD1Q92890 SNORA63.5-201ENST00000363548 123 ntBASIC-0.15□□□□□ -2.43
UFD1Q92890 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.15□□□□□ -2.43
UFD1Q92890 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
UFD1Q92890 RNU6V-201ENST00000384105 107 ntBASIC-0.15□□□□□ -2.43
UFD1Q92890 MIR489-201ENST00000384923 84 ntBASIC-0.15□□□□□ -2.43
UFD1Q92890 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
UFD1Q92890 RPL39P34-201ENST00000477141 156 ntBASIC-0.15□□□□□ -2.43
UFD1Q92890 RNU1-29P-201ENST00000606574 126 ntBASIC-0.15□□□□□ -2.43
UFD1Q92890 MIR499B-201ENST00000636498 73 ntBASIC-0.15□□□□□ -2.43
UFD1Q92890 RNU6-867P-201ENST00000364956 107 ntBASIC-0.16□□□□□ -2.44
UFD1Q92890 RNY1P6-201ENST00000384193 109 ntBASIC-0.16□□□□□ -2.44
UFD1Q92890 RNU4-70P-201ENST00000384579 139 ntBASIC-0.16□□□□□ -2.44
UFD1Q92890 MIR593-201ENST00000384856 100 ntBASIC-0.16□□□□□ -2.44
UFD1Q92890 MIR4743-201ENST00000584576 69 ntBASIC-0.16□□□□□ -2.44
UFD1Q92890 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.16□□□□□ -2.44
UFD1Q92890 U6.104-201ENST00000637979 90 ntBASIC-0.16□□□□□ -2.44
UFD1Q92890 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.17□□□□□ -2.44
UFD1Q92890 MT-TW-201ENST00000387382 68 ntBASIC-0.17□□□□□ -2.44
UFD1Q92890 RNU6-578P-201ENST00000390980 103 ntBASIC-0.17□□□□□ -2.44
UFD1Q92890 MIR1302-6-201ENST00000408466 90 ntBASIC-0.17□□□□□ -2.44
UFD1Q92890 RNA5SP144-201ENST00000410846 116 ntBASIC-0.17□□□□□ -2.44
UFD1Q92890 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.17□□□□□ -2.44
UFD1Q92890 RNU6-635P-201ENST00000516651 102 ntBASIC-0.17□□□□□ -2.44
UFD1Q92890 RNU6-782P-201ENST00000516852 104 ntBASIC-0.17□□□□□ -2.44
UFD1Q92890 MIR4643-201ENST00000577473 78 ntBASIC-0.17□□□□□ -2.44
UFD1Q92890 AC011921.3-201ENST00000605540 361 ntBASIC-0.17□□□□□ -2.44
UFD1Q92890 U6.109-201ENST00000636749 87 ntBASIC-0.17□□□□□ -2.44
UFD1Q92890 MIR101-2-201ENST00000362195 79 ntBASIC-0.18□□□□□ -2.44
UFD1Q92890 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.18□□□□□ -2.44
UFD1Q92890 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.18□□□□□ -2.44
UFD1Q92890 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.18□□□□□ -2.44
UFD1Q92890 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.18□□□□□ -2.44
UFD1Q92890 MIR892B-201ENST00000401279 77 ntBASIC-0.18□□□□□ -2.44
UFD1Q92890 MIR548H2-201ENST00000408874 88 ntBASIC-0.18□□□□□ -2.44
UFD1Q92890 MTCYBP6-201ENST00000441810 138 ntBASIC-0.18□□□□□ -2.44
UFD1Q92890 RNU7-113P-201ENST00000459273 62 ntBASIC-0.18□□□□□ -2.44
UFD1Q92890 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.18□□□□□ -2.44
UFD1Q92890 MIR8062-201ENST00000621515 85 ntBASIC-0.18□□□□□ -2.44
UFD1Q92890 SNORD115-24-201ENST00000363528 82 ntBASIC-0.19□□□□□ -2.44
UFD1Q92890 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.19□□□□□ -2.44
UFD1Q92890 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.19□□□□□ -2.44
UFD1Q92890 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.2□□□□□ -2.44
UFD1Q92890 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.2□□□□□ -2.44
UFD1Q92890 RNU6-726P-201ENST00000364680 107 ntBASIC-0.2□□□□□ -2.44
UFD1Q92890 RNU6-702P-201ENST00000364982 107 ntBASIC-0.2□□□□□ -2.44
UFD1Q92890 RNU6-643P-201ENST00000384018 107 ntBASIC-0.2□□□□□ -2.44
UFD1Q92890 AL022718.1-201ENST00000412004 84 ntBASIC-0.2□□□□□ -2.44
UFD1Q92890 AC244505.6-201ENST00000452829 130 ntBASIC-0.2□□□□□ -2.44
UFD1Q92890 RNA5SP33-201ENST00000516687 98 ntBASIC-0.2□□□□□ -2.44
UFD1Q92890 AC138749.4-201ENST00000563970 127 ntBASIC-0.2□□□□□ -2.44
UFD1Q92890 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.2□□□□□ -2.44
UFD1Q92890 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.2□□□□□ -2.44
UFD1Q92890 SNORD115-2-201ENST00000362842 82 ntBASIC-0.21□□□□□ -2.44
UFD1Q92890 RNU6-238P-201ENST00000363313 106 ntBASIC-0.21□□□□□ -2.44
UFD1Q92890 SNORA25.7-201ENST00000364375 127 ntBASIC-0.21□□□□□ -2.44
UFD1Q92890 SNORD115-20-201ENST00000365099 82 ntBASIC-0.21□□□□□ -2.44
UFD1Q92890 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.21□□□□□ -2.44
UFD1Q92890 SNORA32-201ENST00000384072 121 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms