Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 AC096720.1-201ENST00000604441 183 ntBASIC1.84□□□□□ -2.11
NLRC3Q7RTR2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.84□□□□□ -2.11
NLRC3Q7RTR2 U6.90-201ENST00000614007 104 ntBASIC1.84□□□□□ -2.11
NLRC3Q7RTR2 RN7SL853P-201ENST00000617250 223 ntBASIC1.84□□□□□ -2.11
NLRC3Q7RTR2 MIR6740-201ENST00000618268 113 ntBASIC1.84□□□□□ -2.11
NLRC3Q7RTR2 U6.70-201ENST00000620287 104 ntBASIC1.84□□□□□ -2.11
NLRC3Q7RTR2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
NLRC3Q7RTR2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NLRC3Q7RTR2 RNU6-1321P-201ENST00000390905 107 ntBASIC1.83□□□□□ -2.12
NLRC3Q7RTR2 RNU6-1307P-201ENST00000391012 103 ntBASIC1.83□□□□□ -2.12
NLRC3Q7RTR2 RNU6-613P-201ENST00000410412 108 ntBASIC1.83□□□□□ -2.12
NLRC3Q7RTR2 RN7SKP223-201ENST00000410582 62 ntBASIC1.83□□□□□ -2.12
NLRC3Q7RTR2 MTATP8P2-201ENST00000435212 202 ntBASIC1.83□□□□□ -2.12
NLRC3Q7RTR2 RN7SKP88-201ENST00000516847 250 ntBASIC1.83□□□□□ -2.12
NLRC3Q7RTR2 AL161722.3-201ENST00000605789 2983 ntBASIC1.83□□□□□ -2.12
NLRC3Q7RTR2 7SK.8-201ENST00000612110 250 ntBASIC1.83□□□□□ -2.12
NLRC3Q7RTR2 7SK.11-201ENST00000615477 250 ntBASIC1.83□□□□□ -2.12
NLRC3Q7RTR2 7SK.13-201ENST00000622040 250 ntBASIC1.83□□□□□ -2.12
NLRC3Q7RTR2 SNORD45B-201ENST00000364617 72 ntBASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 RNU6-949P-201ENST00000384040 107 ntBASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 MIR563-201ENST00000385080 79 ntBASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 MIR934-201ENST00000401241 83 ntBASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 SUMO2P12-201ENST00000405924 140 ntBASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 RNU6-1165P-201ENST00000410119 107 ntBASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 Y_RNA.659-201ENST00000515994 113 ntBASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 MIR5582-201ENST00000579697 68 ntBASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 MIR4648-201ENST00000580107 72 ntBASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
NLRC3Q7RTR2 MIR377-201ENST00000362145 69 ntBASIC1.81□□□□□ -2.12
NLRC3Q7RTR2 RNU6-654P-201ENST00000364373 107 ntBASIC1.81□□□□□ -2.12
NLRC3Q7RTR2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.81□□□□□ -2.12
NLRC3Q7RTR2 RNU7-48P-201ENST00000458875 63 ntBASIC1.81□□□□□ -2.12
NLRC3Q7RTR2 AC133485.1-201ENST00000567176 124 ntBASIC1.81□□□□□ -2.12
NLRC3Q7RTR2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
NLRC3Q7RTR2 MIR34C-201ENST00000384831 77 ntBASIC1.8□□□□□ -2.12
NLRC3Q7RTR2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.8□□□□□ -2.12
NLRC3Q7RTR2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.8□□□□□ -2.12
NLRC3Q7RTR2 RPS29P28-201ENST00000446439 141 ntBASIC1.8□□□□□ -2.12
NLRC3Q7RTR2 UBL5P1-201ENST00000507979 193 ntBASIC1.8□□□□□ -2.12
NLRC3Q7RTR2 RNU6-795P-201ENST00000516323 103 ntBASIC1.8□□□□□ -2.12
NLRC3Q7RTR2 RNU6-902P-201ENST00000517212 91 ntBASIC1.8□□□□□ -2.12
NLRC3Q7RTR2 MIR3945-201ENST00000581853 98 ntBASIC1.8□□□□□ -2.12
NLRC3Q7RTR2 SNORA4-201ENST00000584302 138 ntBASIC1.8□□□□□ -2.12
NLRC3Q7RTR2 MIR219B-201ENST00000637023 88 ntBASIC1.8□□□□□ -2.12
NLRC3Q7RTR2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
NLRC3Q7RTR2 RNU6-170P-201ENST00000362832 104 ntBASIC1.79□□□□□ -2.12
NLRC3Q7RTR2 Y_RNA.98-201ENST00000363109 102 ntBASIC1.79□□□□□ -2.12
NLRC3Q7RTR2 Y_RNA.466-201ENST00000384294 113 ntBASIC1.79□□□□□ -2.12
NLRC3Q7RTR2 RNA5SP95-201ENST00000410319 137 ntBASIC1.79□□□□□ -2.12
NLRC3Q7RTR2 AC004941.2-201ENST00000427009 228 ntBASIC1.79□□□□□ -2.12
NLRC3Q7RTR2 AC048334.1-201ENST00000477975 159 ntBASIC1.79□□□□□ -2.12
NLRC3Q7RTR2 AC006254.2-201ENST00000603259 279 ntBASIC1.79□□□□□ -2.12
NLRC3Q7RTR2 MIR376B-201ENST00000614515 100 ntBASIC1.79□□□□□ -2.12
NLRC3Q7RTR2 AC012531.4-201ENST00000616509 177 ntBASIC1.79□□□□□ -2.12
NLRC3Q7RTR2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
NLRC3Q7RTR2 MIR30D-201ENST00000362283 70 ntBASIC1.78□□□□□ -2.12
NLRC3Q7RTR2 SNORD38.1-201ENST00000363863 68 ntBASIC1.78□□□□□ -2.12
NLRC3Q7RTR2 MT-TF-201ENST00000387314 71 ntBASIC1.78□□□□□ -2.12
NLRC3Q7RTR2 MIR4298-201ENST00000584380 73 ntBASIC1.78□□□□□ -2.12
NLRC3Q7RTR2 SEPT14P17-201ENST00000617978 177 ntBASIC1.78□□□□□ -2.12
NLRC3Q7RTR2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.78□□□□□ -2.12
NLRC3Q7RTR2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.78□□□□□ -2.12
NLRC3Q7RTR2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
NLRC3Q7RTR2 Y_RNA.369-201ENST00000365568 117 ntBASIC1.77□□□□□ -2.13
NLRC3Q7RTR2 AC096949.1-201ENST00000412047 152 ntBASIC1.77□□□□□ -2.13
NLRC3Q7RTR2 SNORA31.2-201ENST00000516019 134 ntBASIC1.77□□□□□ -2.13
NLRC3Q7RTR2 RNU6-1006P-201ENST00000516998 103 ntBASIC1.77□□□□□ -2.13
NLRC3Q7RTR2 AP001362.1-201ENST00000625165 124 ntBASIC1.77□□□□□ -2.13
NLRC3Q7RTR2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.77□□□□□ -2.13
NLRC3Q7RTR2 Y_RNA.95-201ENST00000363079 95 ntBASIC1.76□□□□□ -2.13
NLRC3Q7RTR2 Y_RNA.168-201ENST00000363740 102 ntBASIC1.76□□□□□ -2.13
NLRC3Q7RTR2 Y_RNA.247-201ENST00000364500 92 ntBASIC1.76□□□□□ -2.13
NLRC3Q7RTR2 RNU6-1131P-201ENST00000364955 107 ntBASIC1.76□□□□□ -2.13
NLRC3Q7RTR2 AL445685.2-201ENST00000422551 342 ntBASIC1.76□□□□□ -2.13
NLRC3Q7RTR2 AC091304.10-201ENST00000641554 121 ntBASIC1.76□□□□□ -2.13
NLRC3Q7RTR2 Y_RNA.96-201ENST00000363092 109 ntBASIC1.75□□□□□ -2.13
NLRC3Q7RTR2 Y_RNA.140-201ENST00000363474 103 ntBASIC1.75□□□□□ -2.13
NLRC3Q7RTR2 RNU6-580P-201ENST00000365159 107 ntBASIC1.75□□□□□ -2.13
NLRC3Q7RTR2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.75□□□□□ -2.13
NLRC3Q7RTR2 SNORD38.2-201ENST00000384470 69 ntBASIC1.75□□□□□ -2.13
NLRC3Q7RTR2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.75□□□□□ -2.13
NLRC3Q7RTR2 uc_338.6-201ENST00000613544 171 ntBASIC1.75□□□□□ -2.13
NLRC3Q7RTR2 MALAT1.1-201ENST00000618249 95 ntBASIC1.75□□□□□ -2.13
NLRC3Q7RTR2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
NLRC3Q7RTR2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
NLRC3Q7RTR2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
NLRC3Q7RTR2 Y_RNA.220-201ENST00000364244 109 ntBASIC1.74□□□□□ -2.13
NLRC3Q7RTR2 RNU6-60P-201ENST00000364792 103 ntBASIC1.74□□□□□ -2.13
NLRC3Q7RTR2 MIR488-201ENST00000365739 83 ntBASIC1.74□□□□□ -2.13
NLRC3Q7RTR2 SNORA2B-201ENST00000384583 137 ntBASIC1.74□□□□□ -2.13
NLRC3Q7RTR2 SNORA64-201ENST00000384674 134 ntBASIC1.74□□□□□ -2.13
NLRC3Q7RTR2 RNU7-61P-201ENST00000515897 61 ntBASIC1.74□□□□□ -2.13
NLRC3Q7RTR2 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
NLRC3Q7RTR2 MIR4777-201ENST00000583710 86 ntBASIC1.74□□□□□ -2.13
NLRC3Q7RTR2 MIR4439-201ENST00000583746 80 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 285.9 ms