Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC087343.1-201ENST00000477341 475 ntBASIC0.96□□□□□ -2.26
EFNB3Q15768 RNU7-123P-201ENST00000515911 60 ntBASIC0.96□□□□□ -2.26
EFNB3Q15768 MIR3910-1-201ENST00000580936 111 ntBASIC0.96□□□□□ -2.26
EFNB3Q15768 AC132825.6-201ENST00000638861 357 ntBASIC0.96□□□□□ -2.26
EFNB3Q15768 MIR1285-1-201ENST00000408593 84 ntBASIC0.95□□□□□ -2.26
EFNB3Q15768 Y_RNA.617-201ENST00000410920 90 ntBASIC0.95□□□□□ -2.26
EFNB3Q15768 RNU4-61P-201ENST00000411243 107 ntBASIC0.95□□□□□ -2.26
EFNB3Q15768 RNY4P20-201ENST00000516678 93 ntBASIC0.95□□□□□ -2.26
EFNB3Q15768 RNU6-1258P-201ENST00000516911 111 ntBASIC0.95□□□□□ -2.26
EFNB3Q15768 AL662814.1-201ENST00000617364 121 ntBASIC0.95□□□□□ -2.26
EFNB3Q15768 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.95□□□□□ -2.26
EFNB3Q15768 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
EFNB3Q15768 RNU6-81P-201ENST00000365608 104 ntBASIC0.94□□□□□ -2.26
EFNB3Q15768 SNORA18-201ENST00000384416 132 ntBASIC0.94□□□□□ -2.26
EFNB3Q15768 RNU6-959P-201ENST00000384671 107 ntBASIC0.94□□□□□ -2.26
EFNB3Q15768 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.94□□□□□ -2.26
EFNB3Q15768 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.94□□□□□ -2.26
EFNB3Q15768 RPS29P28-201ENST00000446439 141 ntBASIC0.94□□□□□ -2.26
EFNB3Q15768 RPL39P25-201ENST00000449384 154 ntBASIC0.94□□□□□ -2.26
EFNB3Q15768 SNORD124-201ENST00000459577 104 ntBASIC0.94□□□□□ -2.26
EFNB3Q15768 UBL5P1-201ENST00000507979 193 ntBASIC0.94□□□□□ -2.26
EFNB3Q15768 AL136317.1-201ENST00000612653 226 ntBASIC0.94□□□□□ -2.26
EFNB3Q15768 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
EFNB3Q15768 MIR30D-201ENST00000362283 70 ntBASIC0.93□□□□□ -2.26
EFNB3Q15768 Y_RNA.71-201ENST00000362892 104 ntBASIC0.93□□□□□ -2.26
EFNB3Q15768 RNU6-934P-201ENST00000365154 107 ntBASIC0.93□□□□□ -2.26
EFNB3Q15768 Y_RNA.470-201ENST00000384307 117 ntBASIC0.93□□□□□ -2.26
EFNB3Q15768 MIR942-201ENST00000401111 86 ntBASIC0.93□□□□□ -2.26
EFNB3Q15768 RNU6-1086P-201ENST00000410930 100 ntBASIC0.93□□□□□ -2.26
EFNB3Q15768 RNU6-1234P-201ENST00000516877 103 ntBASIC0.93□□□□□ -2.26
EFNB3Q15768 SNORA4-201ENST00000584302 138 ntBASIC0.93□□□□□ -2.26
EFNB3Q15768 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.93□□□□□ -2.26
EFNB3Q15768 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.93□□□□□ -2.26
EFNB3Q15768 Y_RNA.213-201ENST00000364178 111 ntBASIC0.92□□□□□ -2.26
EFNB3Q15768 Y_RNA.346-201ENST00000365385 112 ntBASIC0.92□□□□□ -2.26
EFNB3Q15768 Y_RNA.528-201ENST00000384575 108 ntBASIC0.92□□□□□ -2.26
EFNB3Q15768 MIR1827-201ENST00000408549 66 ntBASIC0.92□□□□□ -2.26
EFNB3Q15768 RNU4-69P-201ENST00000410677 143 ntBASIC0.92□□□□□ -2.26
EFNB3Q15768 RPS26P5-201ENST00000418544 335 ntBASIC0.92□□□□□ -2.26
EFNB3Q15768 U7.7-201ENST00000459276 60 ntBASIC0.92□□□□□ -2.26
EFNB3Q15768 RNU6-781P-201ENST00000516377 101 ntBASIC0.92□□□□□ -2.26
EFNB3Q15768 IGKV1-22-201ENST00000524313 326 ntBASIC0.92□□□□□ -2.26
EFNB3Q15768 AC141846.1-201ENST00000568348 142 ntBASIC0.92□□□□□ -2.26
EFNB3Q15768 AC025166.1-201ENST00000612411 163 ntBASIC0.92□□□□□ -2.26
EFNB3Q15768 MIR1-1-201ENST00000362147 71 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 Y_RNA.191-201ENST00000363972 113 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 SNORD58C-201ENST00000365223 64 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 SNORA32-201ENST00000384072 121 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 RNU6-342P-201ENST00000384521 104 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 SNORD77B-201ENST00000391112 67 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 SNORD83.1-201ENST00000411362 77 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 RNU7-107P-201ENST00000459121 61 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 snoU13.21-201ENST00000459368 105 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 COX6CP6-201ENST00000490840 228 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 RNU7-79P-201ENST00000516082 62 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 RNU6-1110P-201ENST00000516462 101 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 RNU6-62P-201ENST00000516526 102 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 RNU7-35P-201ENST00000517174 62 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 MIR4771-2-201ENST00000577758 74 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 MIR4771-1-201ENST00000582617 74 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 MIR548AE2-201ENST00000583456 67 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 uc_338.6-201ENST00000613544 171 ntBASIC0.91□□□□□ -2.26
EFNB3Q15768 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.26
EFNB3Q15768 AL157777.2-201ENST00000258070 137 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 Y_RNA.198-201ENST00000364013 98 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 SNORD116-14-201ENST00000383894 92 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 SNORD116-17-201ENST00000383929 92 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 SNORD116-15-201ENST00000384445 92 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 RNU6-1117P-201ENST00000384525 104 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 RNU6-1104P-201ENST00000384723 104 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 SNORD116-19-201ENST00000384729 92 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 MIR100-201ENST00000385259 80 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 AC008267.6-201ENST00000441664 139 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.9□□□□□ -2.27
EFNB3Q15768 RNU6-772P-201ENST00000516042 105 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 AC022523.2-201ENST00000561045 150 ntBASIC0.9□□□□□ -2.27
EFNB3Q15768 MIR96-201ENST00000362288 78 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 Y_RNA.218-201ENST00000364218 104 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 RNU1-93P-201ENST00000364704 169 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 RNU6-949P-201ENST00000384040 107 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 MIR1257-201ENST00000408490 117 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 RNU7-185P-201ENST00000459215 60 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 PDCD5P2-201ENST00000507570 312 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 RNA5SP255-201ENST00000516370 107 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 RNU7-6P-201ENST00000516845 62 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 MIR3163-201ENST00000581592 73 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 AC025627.3-201ENST00000582078 182 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 MIR4452-201ENST00000583004 71 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 MTND5P18-201ENST00000445624 1801 ntBASIC0.89□□□□□ -2.27
EFNB3Q15768 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
EFNB3Q15768 Y_RNA.127-201ENST00000363386 109 ntBASIC0.88□□□□□ -2.27
EFNB3Q15768 SNORA22-201ENST00000383907 134 ntBASIC0.88□□□□□ -2.27
EFNB3Q15768 SNORA22C-201ENST00000384614 134 ntBASIC0.88□□□□□ -2.27
EFNB3Q15768 SNORD89-201ENST00000390981 114 ntBASIC0.88□□□□□ -2.27
EFNB3Q15768 AL606753.1-201ENST00000427435 87 ntBASIC0.88□□□□□ -2.27
EFNB3Q15768 RNU6-1333P-201ENST00000516162 93 ntBASIC0.88□□□□□ -2.27
EFNB3Q15768 RNU6-659P-201ENST00000516454 104 ntBASIC0.88□□□□□ -2.27
EFNB3Q15768 SNORD114-21-201ENST00000606412 72 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms