Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 RNY1P11-201ENST00000363759 113 ntBASIC0.73□□□□□ -2.29
IRX4P78413 Y_RNA.178-201ENST00000363832 102 ntBASIC0.73□□□□□ -2.29
IRX4P78413 Y_RNA.258-201ENST00000364613 105 ntBASIC0.73□□□□□ -2.29
IRX4P78413 Y_RNA.270-201ENST00000364693 104 ntBASIC0.73□□□□□ -2.29
IRX4P78413 RNU4-11P-201ENST00000365287 132 ntBASIC0.73□□□□□ -2.29
IRX4P78413 Y_RNA.430-201ENST00000384081 110 ntBASIC0.73□□□□□ -2.29
IRX4P78413 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.73□□□□□ -2.29
IRX4P78413 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
IRX4P78413 RPS26P5-201ENST00000418544 335 ntBASIC0.73□□□□□ -2.29
IRX4P78413 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
IRX4P78413 U7.7-201ENST00000459276 60 ntBASIC0.73□□□□□ -2.29
IRX4P78413 RNU6-1110P-201ENST00000516462 101 ntBASIC0.73□□□□□ -2.29
IRX4P78413 RNU6-794P-201ENST00000517261 64 ntBASIC0.73□□□□□ -2.29
IRX4P78413 MIR3671-201ENST00000580455 88 ntBASIC0.73□□□□□ -2.29
IRX4P78413 AL136317.1-201ENST00000612653 226 ntBASIC0.73□□□□□ -2.29
IRX4P78413 FTX_2.1-201ENST00000618816 94 ntBASIC0.73□□□□□ -2.29
IRX4P78413 RNU6-369P-201ENST00000362515 102 ntBASIC0.72□□□□□ -2.29
IRX4P78413 Y_RNA.251-201ENST00000364551 99 ntBASIC0.72□□□□□ -2.29
IRX4P78413 RNU6-1130P-201ENST00000365434 107 ntBASIC0.72□□□□□ -2.29
IRX4P78413 SNORD116-18-201ENST00000383961 92 ntBASIC0.72□□□□□ -2.29
IRX4P78413 RNA5SP237-201ENST00000410414 113 ntBASIC0.72□□□□□ -2.29
IRX4P78413 RNU2-60P-201ENST00000517290 128 ntBASIC0.72□□□□□ -2.29
IRX4P78413 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
IRX4P78413 RNU6-151P-201ENST00000364158 107 ntBASIC0.71□□□□□ -2.3
IRX4P78413 RNU6-690P-201ENST00000365242 106 ntBASIC0.71□□□□□ -2.3
IRX4P78413 RNU6-1237P-201ENST00000384777 107 ntBASIC0.71□□□□□ -2.3
IRX4P78413 MIR563-201ENST00000385080 79 ntBASIC0.71□□□□□ -2.3
IRX4P78413 PCNPP3-201ENST00000393579 471 ntBASIC0.71□□□□□ -2.3
IRX4P78413 SNORD99-201ENST00000408612 74 ntBASIC0.71□□□□□ -2.3
IRX4P78413 MTATP6P21-201ENST00000440681 189 ntBASIC0.71□□□□□ -2.3
IRX4P78413 AC113410.1-201ENST00000505029 247 ntBASIC0.71□□□□□ -2.3
IRX4P78413 RNU6-977P-201ENST00000516411 103 ntBASIC0.71□□□□□ -2.3
IRX4P78413 AC004812.1-201ENST00000540773 146 ntBASIC0.71□□□□□ -2.3
IRX4P78413 AC112693.2-201ENST00000556538 232 ntBASIC0.71□□□□□ -2.3
IRX4P78413 MIR4711-201ENST00000578274 70 ntBASIC0.71□□□□□ -2.3
IRX4P78413 Y_RNA.8-201ENST00000362353 102 ntBASIC0.7□□□□□ -2.3
IRX4P78413 RNU6-349P-201ENST00000362402 107 ntBASIC0.7□□□□□ -2.3
IRX4P78413 RNU6-449P-201ENST00000383914 107 ntBASIC0.7□□□□□ -2.3
IRX4P78413 RNU6-804P-201ENST00000384286 107 ntBASIC0.7□□□□□ -2.3
IRX4P78413 Y_RNA.584-201ENST00000391090 114 ntBASIC0.7□□□□□ -2.3
IRX4P78413 AC108059.2-201ENST00000434626 151 ntBASIC0.7□□□□□ -2.3
IRX4P78413 AL109933.3-201ENST00000619095 188 ntBASIC0.7□□□□□ -2.3
IRX4P78413 MIR30D-201ENST00000362283 70 ntBASIC0.69□□□□□ -2.3
IRX4P78413 RNA5SP347-201ENST00000362445 119 ntBASIC0.69□□□□□ -2.3
IRX4P78413 RNU6-886P-201ENST00000384319 105 ntBASIC0.69□□□□□ -2.3
IRX4P78413 MIR520F-201ENST00000384824 87 ntBASIC0.69□□□□□ -2.3
IRX4P78413 SNORD105-201ENST00000386910 85 ntBASIC0.69□□□□□ -2.3
IRX4P78413 MT-TF-201ENST00000387314 71 ntBASIC0.69□□□□□ -2.3
IRX4P78413 MIR1257-201ENST00000408490 117 ntBASIC0.69□□□□□ -2.3
IRX4P78413 RNA5SP144-201ENST00000410846 116 ntBASIC0.69□□□□□ -2.3
IRX4P78413 MIR18B-201ENST00000454574 71 ntBASIC0.69□□□□□ -2.3
IRX4P78413 RNU6-240P-201ENST00000516098 97 ntBASIC0.69□□□□□ -2.3
IRX4P78413 Y_RNA.681-201ENST00000516445 113 ntBASIC0.69□□□□□ -2.3
IRX4P78413 Y_RNA.757-201ENST00000578934 114 ntBASIC0.69□□□□□ -2.3
IRX4P78413 AC025627.3-201ENST00000582078 182 ntBASIC0.69□□□□□ -2.3
IRX4P78413 MIR4676-201ENST00000583078 72 ntBASIC0.69□□□□□ -2.3
IRX4P78413 AC020891.4-201ENST00000605745 93 ntBASIC0.69□□□□□ -2.3
IRX4P78413 AC098479.1-201ENST00000609225 154 ntBASIC0.69□□□□□ -2.3
IRX4P78413 AL662814.1-201ENST00000617364 121 ntBASIC0.69□□□□□ -2.3
IRX4P78413 Y_RNA.778-201ENST00000620203 90 ntBASIC0.69□□□□□ -2.3
IRX4P78413 Y_RNA.68-201ENST00000362881 102 ntBASIC0.68□□□□□ -2.3
IRX4P78413 Y_RNA.171-201ENST00000363760 102 ntBASIC0.68□□□□□ -2.3
IRX4P78413 SNORD18B-201ENST00000365659 72 ntBASIC0.68□□□□□ -2.3
IRX4P78413 SNORA18-201ENST00000384416 132 ntBASIC0.68□□□□□ -2.3
IRX4P78413 RPL39P25-201ENST00000449384 154 ntBASIC0.68□□□□□ -2.3
IRX4P78413 RNU6-893P-201ENST00000458841 100 ntBASIC0.68□□□□□ -2.3
IRX4P78413 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.68□□□□□ -2.3
IRX4P78413 Y_RNA.686-201ENST00000516548 134 ntBASIC0.68□□□□□ -2.3
IRX4P78413 RNU6-1258P-201ENST00000516911 111 ntBASIC0.68□□□□□ -2.3
IRX4P78413 MIR8087-201ENST00000612745 78 ntBASIC0.68□□□□□ -2.3
IRX4P78413 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
IRX4P78413 RNU6-508P-201ENST00000363231 103 ntBASIC0.67□□□□□ -2.3
IRX4P78413 Y_RNA.398-201ENST00000383952 99 ntBASIC0.67□□□□□ -2.3
IRX4P78413 MIR520H-201ENST00000385126 88 ntBASIC0.67□□□□□ -2.3
IRX4P78413 RNU6-394P-201ENST00000410735 107 ntBASIC0.67□□□□□ -2.3
IRX4P78413 AL022718.1-201ENST00000412004 84 ntBASIC0.67□□□□□ -2.3
IRX4P78413 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.67□□□□□ -2.3
IRX4P78413 RNU7-185P-201ENST00000459215 60 ntBASIC0.67□□□□□ -2.3
IRX4P78413 Y_RNA.690-201ENST00000516603 95 ntBASIC0.67□□□□□ -2.3
IRX4P78413 MIR3144-201ENST00000579460 79 ntBASIC0.67□□□□□ -2.3
IRX4P78413 MIR4804-201ENST00000581683 73 ntBASIC0.67□□□□□ -2.3
IRX4P78413 AC011603.4-201ENST00000611325 277 ntBASIC0.67□□□□□ -2.3
IRX4P78413 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
IRX4P78413 Y_RNA.120-201ENST00000363304 110 ntBASIC0.66□□□□□ -2.3
IRX4P78413 Y_RNA.555-201ENST00000384673 110 ntBASIC0.66□□□□□ -2.3
IRX4P78413 Y_RNA.580-201ENST00000391004 95 ntBASIC0.66□□□□□ -2.3
IRX4P78413 AC098934.3-201ENST00000430450 190 ntBASIC0.66□□□□□ -2.3
IRX4P78413 RNU7-113P-201ENST00000459273 62 ntBASIC0.66□□□□□ -2.3
IRX4P78413 Y_RNA.651-201ENST00000459380 103 ntBASIC0.66□□□□□ -2.3
IRX4P78413 RNU5E-3P-201ENST00000515913 68 ntBASIC0.66□□□□□ -2.3
IRX4P78413 SNORA25.12-201ENST00000516202 82 ntBASIC0.66□□□□□ -2.3
IRX4P78413 AC141846.1-201ENST00000568348 142 ntBASIC0.66□□□□□ -2.3
IRX4P78413 AC011195.1-201ENST00000578177 177 ntBASIC0.66□□□□□ -2.3
IRX4P78413 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.66□□□□□ -2.3
IRX4P78413 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.65□□□□□ -2.31
IRX4P78413 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
IRX4P78413 RNU6-460P-201ENST00000391158 108 ntBASIC0.65□□□□□ -2.31
IRX4P78413 MIR938-201ENST00000401216 83 ntBASIC0.65□□□□□ -2.31
IRX4P78413 MIR513C-201ENST00000401352 84 ntBASIC0.65□□□□□ -2.31
IRX4P78413 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms