Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 U3.27-201ENST00000391237 200 ntBASIC3.49□□□□□ -1.85
ATN1P54259 MIR514B-201ENST00000516774 80 ntBASIC3.49□□□□□ -1.85
ATN1P54259 RNA5SP481-201ENST00000516814 122 ntBASIC3.49□□□□□ -1.85
ATN1P54259 MIR4264-201ENST00000583520 66 ntBASIC3.49□□□□□ -1.85
ATN1P54259 MAPK10-362ENST00000641864 4484 ntBASIC3.49□□□□□ -1.85
ATN1P54259 AL035425.3-201ENST00000564206 4996 ntBASIC3.48□□□□□ -1.85
ATN1P54259 Y_RNA.258-201ENST00000364613 105 ntBASIC3.48□□□□□ -1.85
ATN1P54259 BX510359.4-201ENST00000423750 193 ntBASIC3.48□□□□□ -1.85
ATN1P54259 AC108938.1-201ENST00000451204 136 ntBASIC3.48□□□□□ -1.85
ATN1P54259 MIR3616-201ENST00000584070 92 ntBASIC3.48□□□□□ -1.85
ATN1P54259 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC3.48□□□□□ -1.85
ATN1P54259 AC106800.4-201ENST00000614905 153 ntBASIC3.48□□□□□ -1.85
ATN1P54259 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
ATN1P54259 AC073869.9-201ENST00000641610 120 ntBASIC3.48□□□□□ -1.85
ATN1P54259 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATN1P54259 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
ATN1P54259 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ATN1P54259 RNU6-805P-201ENST00000365643 106 ntBASIC3.47□□□□□ -1.85
ATN1P54259 SNORD15B-201ENST00000384714 146 ntBASIC3.47□□□□□ -1.85
ATN1P54259 RNA5SP299-201ENST00000391203 116 ntBASIC3.47□□□□□ -1.85
ATN1P54259 MIR4435-1-201ENST00000582552 80 ntBASIC3.47□□□□□ -1.85
ATN1P54259 DLEU2_4.2-201ENST00000616613 58 ntBASIC3.47□□□□□ -1.85
ATN1P54259 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.47□□□□□ -1.85
ATN1P54259 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATN1P54259 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.47□□□□□ -1.85
ATN1P54259 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
ATN1P54259 RNU6-1312P-201ENST00000362425 108 ntBASIC3.46□□□□□ -1.86
ATN1P54259 RNU6-396P-201ENST00000365369 105 ntBASIC3.46□□□□□ -1.86
ATN1P54259 SNORD67-201ENST00000390833 111 ntBASIC3.46□□□□□ -1.86
ATN1P54259 Y_RNA.588-201ENST00000391254 102 ntBASIC3.46□□□□□ -1.86
ATN1P54259 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC3.46□□□□□ -1.86
ATN1P54259 RNU6-92P-201ENST00000605893 104 ntBASIC3.46□□□□□ -1.86
ATN1P54259 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.46□□□□□ -1.86
ATN1P54259 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ATN1P54259 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATN1P54259 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATN1P54259 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATN1P54259 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ATN1P54259 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATN1P54259 AC092435.3-201ENST00000565538 3654 ntBASIC3.45□□□□□ -1.86
ATN1P54259 MIR22-201ENST00000362190 85 ntBASIC3.45□□□□□ -1.86
ATN1P54259 Y_RNA.56-201ENST00000362798 112 ntBASIC3.45□□□□□ -1.86
ATN1P54259 SNORA25.3-201ENST00000363205 127 ntBASIC3.45□□□□□ -1.86
ATN1P54259 RNA5SP215-201ENST00000363440 122 ntBASIC3.45□□□□□ -1.86
ATN1P54259 RNA5SP293-201ENST00000410527 113 ntBASIC3.45□□□□□ -1.86
ATN1P54259 RNA5SP229-201ENST00000410809 99 ntBASIC3.45□□□□□ -1.86
ATN1P54259 AC105272.1-201ENST00000438604 198 ntBASIC3.45□□□□□ -1.86
ATN1P54259 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.45□□□□□ -1.86
ATN1P54259 AC103810.8-201ENST00000607347 118 ntBASIC3.45□□□□□ -1.86
ATN1P54259 uc_338.10-201ENST00000621872 182 ntBASIC3.45□□□□□ -1.86
ATN1P54259 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATN1P54259 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ATN1P54259 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
ATN1P54259 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATN1P54259 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
ATN1P54259 RNA5SP184-201ENST00000411071 108 ntBASIC3.44□□□□□ -1.86
ATN1P54259 RNU7-62P-201ENST00000458856 62 ntBASIC3.44□□□□□ -1.86
ATN1P54259 MIR622-201ENST00000638396 96 ntBASIC3.44□□□□□ -1.86
ATN1P54259 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATN1P54259 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATN1P54259 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
ATN1P54259 AC023934.1-201ENST00000574529 2389 ntBASIC3.43□□□□□ -1.86
ATN1P54259 AC097635.1-201ENST00000450678 155 ntBASIC3.43□□□□□ -1.86
ATN1P54259 RNU6-322P-201ENST00000516010 103 ntBASIC3.43□□□□□ -1.86
ATN1P54259 AL449363.1-201ENST00000617815 186 ntBASIC3.43□□□□□ -1.86
ATN1P54259 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATN1P54259 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATN1P54259 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATN1P54259 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
ATN1P54259 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.43□□□□□ -1.86
ATN1P54259 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATN1P54259 RNU11-3P-201ENST00000391111 133 ntBASIC3.42□□□□□ -1.86
ATN1P54259 RNU6-1054P-201ENST00000411293 104 ntBASIC3.42□□□□□ -1.86
ATN1P54259 RNA5SP508-201ENST00000411327 119 ntBASIC3.42□□□□□ -1.86
ATN1P54259 MIR4738-201ENST00000579134 87 ntBASIC3.42□□□□□ -1.86
ATN1P54259 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATN1P54259 AC062016.1-201ENST00000355719 319 ntBASIC3.41□□□□□ -1.86
ATN1P54259 MIR597-201ENST00000384968 97 ntBASIC3.41□□□□□ -1.86
ATN1P54259 MT-TN-201ENST00000387400 73 ntBASIC3.41□□□□□ -1.86
ATN1P54259 SNORD75.2-201ENST00000408784 58 ntBASIC3.41□□□□□ -1.86
ATN1P54259 SNORD93-201ENST00000408813 74 ntBASIC3.41□□□□□ -1.86
ATN1P54259 RNU7-26P-201ENST00000458980 63 ntBASIC3.41□□□□□ -1.86
ATN1P54259 AP000942.3-201ENST00000603702 160 ntBASIC3.41□□□□□ -1.86
ATN1P54259 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ATN1P54259 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.41□□□□□ -1.86
ATN1P54259 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATN1P54259 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATN1P54259 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.4□□□□□ -1.86
ATN1P54259 RNU7-24P-201ENST00000458867 62 ntBASIC3.4□□□□□ -1.87
ATN1P54259 RNVU1-2-201ENST00000516326 135 ntBASIC3.4□□□□□ -1.87
ATN1P54259 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.4□□□□□ -1.87
ATN1P54259 SNORD60.1-201ENST00000362451 73 ntBASIC3.39□□□□□ -1.87
ATN1P54259 RNU6-645P-201ENST00000364649 106 ntBASIC3.39□□□□□ -1.87
ATN1P54259 RNU6-302P-201ENST00000365249 107 ntBASIC3.39□□□□□ -1.87
ATN1P54259 RNU6-1039P-201ENST00000383931 107 ntBASIC3.39□□□□□ -1.87
ATN1P54259 MIR653-201ENST00000385279 96 ntBASIC3.39□□□□□ -1.87
ATN1P54259 RPL30P7-201ENST00000479312 323 ntBASIC3.39□□□□□ -1.87
ATN1P54259 AC013244.2-201ENST00000603396 103 ntBASIC3.39□□□□□ -1.87
ATN1P54259 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATN1P54259 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 348.1 ms