Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 Y_RNA.470-201ENST00000384307 117 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 RNU6-735P-201ENST00000410612 107 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 RNU6-1190P-201ENST00000410811 104 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 RNU7-21P-201ENST00000459430 62 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 AL670379.3-201ENST00000605040 251 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 AC012676.2-201ENST00000619258 186 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 MIR6717-201ENST00000622747 73 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 AC021613.1-201ENST00000623880 111 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 AL391516.1-201ENST00000554380 2449 ntBASIC0.8□□□□□ -2.28
HCFC1P51610 RNU6-915P-201ENST00000364943 103 ntBASIC0.8□□□□□ -2.28
HCFC1P51610 Y_RNA.568-201ENST00000384742 113 ntBASIC0.8□□□□□ -2.28
HCFC1P51610 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
HCFC1P51610 RNU6-1321P-201ENST00000390905 107 ntBASIC0.8□□□□□ -2.28
HCFC1P51610 RNU6-257P-201ENST00000410238 98 ntBASIC0.8□□□□□ -2.28
HCFC1P51610 AC244023.1-201ENST00000426884 112 ntBASIC0.8□□□□□ -2.28
HCFC1P51610 RNU6-1061P-201ENST00000516530 99 ntBASIC0.8□□□□□ -2.28
HCFC1P51610 RNA5SP404-201ENST00000517118 132 ntBASIC0.8□□□□□ -2.28
HCFC1P51610 AC242498.1-201ENST00000604134 111 ntBASIC0.8□□□□□ -2.28
HCFC1P51610 PRELID3BP2-201ENST00000605362 201 ntBASIC0.8□□□□□ -2.28
HCFC1P51610 TUG1_4.1-201ENST00000619464 181 ntBASIC0.8□□□□□ -2.28
HCFC1P51610 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.79□□□□□ -2.28
HCFC1P51610 Y_RNA.120-201ENST00000363304 110 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 SNORA18-201ENST00000384416 132 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 RNY1P4-201ENST00000384595 115 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 AL603908.1-201ENST00000406098 201 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.79□□□□□ -2.28
HCFC1P51610 Y_RNA.690-201ENST00000516603 95 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 RNU7-35P-201ENST00000517174 62 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.79□□□□□ -2.28
HCFC1P51610 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
HCFC1P51610 RNU6-949P-201ENST00000384040 107 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 SNORA80D-201ENST00000384488 135 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 RNU6-913P-201ENST00000390913 95 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 MIR1270-201ENST00000459320 83 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 RNU6-1258P-201ENST00000516911 111 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 HSPE1P19-201ENST00000603327 295 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 AC010487.4-201ENST00000637027 61 ntBASIC0.79□□□□□ -2.28
HCFC1P51610 RNU6-1237P-201ENST00000384777 107 ntBASIC0.78□□□□□ -2.28
HCFC1P51610 SNORD99-201ENST00000408612 74 ntBASIC0.78□□□□□ -2.28
HCFC1P51610 Y_RNA.651-201ENST00000459380 103 ntBASIC0.78□□□□□ -2.28
HCFC1P51610 RNU7-45P-201ENST00000459460 63 ntBASIC0.78□□□□□ -2.28
HCFC1P51610 RNU6-346P-201ENST00000516288 111 ntBASIC0.78□□□□□ -2.28
HCFC1P51610 RNU7-53P-201ENST00000516705 60 ntBASIC0.78□□□□□ -2.28
HCFC1P51610 AP001328.1-201ENST00000528550 176 ntBASIC0.78□□□□□ -2.28
HCFC1P51610 Y_RNA.757-201ENST00000578934 114 ntBASIC0.78□□□□□ -2.28
HCFC1P51610 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 Y_RNA.42-201ENST00000362660 108 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 MIR569-201ENST00000385228 96 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 MIR936-201ENST00000401264 98 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 Y_RNA.630-201ENST00000411370 108 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 RNU7-40P-201ENST00000516397 64 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 uc_338.6-201ENST00000613544 171 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
HCFC1P51610 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.77□□□□□ -2.29
HCFC1P51610 MIR26B-201ENST00000362251 77 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 Y_RNA.85-201ENST00000363014 111 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 RNU6-580P-201ENST00000365159 107 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 Y_RNA.346-201ENST00000365385 112 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 RNU2-51P-201ENST00000410708 197 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 MIR4804-201ENST00000581683 73 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 RN7SL793P-201ENST00000583259 296 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 FAM71BP1-201ENST00000604431 523 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 MIR6516-201ENST00000630554 81 ntBASIC0.77□□□□□ -2.29
HCFC1P51610 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
HCFC1P51610 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 TMSB4XP3-201ENST00000445144 114 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 MIR18B-201ENST00000454574 71 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 RNA5SP255-201ENST00000516370 107 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 RNU6-977P-201ENST00000516411 103 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 MIR2115-201ENST00000516657 100 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 RNA5SP33-201ENST00000516687 98 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 RNU6-971P-201ENST00000516920 106 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 SNORA70.22-201ENST00000517160 124 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 Y_RNA.71-201ENST00000362892 104 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 SNORD114-23-201ENST00000363536 72 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 Y_RNA.525-201ENST00000384570 113 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 MIR206-201ENST00000384872 86 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 MIR618-201ENST00000385287 98 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 MIR942-201ENST00000401111 86 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 RNA5SP237-201ENST00000410414 113 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 MRPL35P3-201ENST00000421557 364 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 SNORD67.1-201ENST00000516618 108 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 MTND5P34-201ENST00000568888 325 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 MIR3133-201ENST00000583157 78 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
HCFC1P51610 RNU6-369P-201ENST00000362515 102 ntBASIC0.75□□□□□ -2.29
HCFC1P51610 MIR520H-201ENST00000385126 88 ntBASIC0.75□□□□□ -2.29
HCFC1P51610 RNU6-1168P-201ENST00000390831 104 ntBASIC0.75□□□□□ -2.29
HCFC1P51610 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.75□□□□□ -2.29
HCFC1P51610 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.75□□□□□ -2.29
HCFC1P51610 RNU7-185P-201ENST00000459215 60 ntBASIC0.75□□□□□ -2.29
HCFC1P51610 RNU5E-3P-201ENST00000515913 68 ntBASIC0.75□□□□□ -2.29
HCFC1P51610 AC022523.2-201ENST00000561045 150 ntBASIC0.75□□□□□ -2.29
HCFC1P51610 RNU6-235P-201ENST00000362644 107 ntBASIC0.74□□□□□ -2.29
HCFC1P51610 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
HCFC1P51610 Y_RNA.563-201ENST00000384707 108 ntBASIC0.74□□□□□ -2.29
HCFC1P51610 MIR563-201ENST00000385080 79 ntBASIC0.74□□□□□ -2.29
HCFC1P51610 RNU6-994P-201ENST00000410507 111 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms