Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MIR3192-201ENST00000584920 77 ntBASIC2.47□□□□□ -2.01
RNF144AP50876 AC067747.1-201ENST00000608026 250 ntBASIC2.47□□□□□ -2.01
RNF144AP50876 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
RNF144AP50876 AC008163.1-202ENST00000636004 2889 ntBASIC2.46□□□□□ -2.02
RNF144AP50876 RNU1-52P-201ENST00000384190 164 ntBASIC2.46□□□□□ -2.02
RNF144AP50876 MIR513A1-201ENST00000385138 129 ntBASIC2.46□□□□□ -2.02
RNF144AP50876 RNU6-871P-201ENST00000516122 100 ntBASIC2.46□□□□□ -2.02
RNF144AP50876 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.46□□□□□ -2.02
RNF144AP50876 GTF3AP2-201ENST00000557014 266 ntBASIC2.46□□□□□ -2.02
RNF144AP50876 AL357312.1-201ENST00000603879 298 ntBASIC2.46□□□□□ -2.02
RNF144AP50876 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
RNF144AP50876 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RNF144AP50876 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
RNF144AP50876 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RNF144AP50876 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.45□□□□□ -2.02
RNF144AP50876 MIR30D-201ENST00000362283 70 ntBASIC2.45□□□□□ -2.02
RNF144AP50876 SNORA80A-201ENST00000363922 136 ntBASIC2.45□□□□□ -2.02
RNF144AP50876 RNU6-1165P-201ENST00000410119 107 ntBASIC2.45□□□□□ -2.02
RNF144AP50876 RNU6-539P-201ENST00000516665 103 ntBASIC2.45□□□□□ -2.02
RNF144AP50876 RNU6-922P-201ENST00000516753 99 ntBASIC2.45□□□□□ -2.02
RNF144AP50876 MIR4484-201ENST00000582855 83 ntBASIC2.45□□□□□ -2.02
RNF144AP50876 MIR4264-201ENST00000583520 66 ntBASIC2.45□□□□□ -2.02
RNF144AP50876 AP000942.3-201ENST00000603702 160 ntBASIC2.45□□□□□ -2.02
RNF144AP50876 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RNF144AP50876 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
RNF144AP50876 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
RNF144AP50876 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.44□□□□□ -2.02
RNF144AP50876 SNORA25.3-201ENST00000363205 127 ntBASIC2.44□□□□□ -2.02
RNF144AP50876 Y_RNA.283-201ENST00000364798 112 ntBASIC2.44□□□□□ -2.02
RNF144AP50876 SNORD41-201ENST00000386967 70 ntBASIC2.44□□□□□ -2.02
RNF144AP50876 RNU6-205P-201ENST00000390858 107 ntBASIC2.44□□□□□ -2.02
RNF144AP50876 MIR1302-7-201ENST00000408841 72 ntBASIC2.44□□□□□ -2.02
RNF144AP50876 AC245517.4-201ENST00000448601 281 ntBASIC2.44□□□□□ -2.02
RNF144AP50876 RNU6-807P-201ENST00000516805 107 ntBASIC2.44□□□□□ -2.02
RNF144AP50876 RNU6-448P-201ENST00000517052 107 ntBASIC2.44□□□□□ -2.02
RNF144AP50876 AC121758.2-201ENST00000553271 193 ntBASIC2.44□□□□□ -2.02
RNF144AP50876 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.44□□□□□ -2.02
RNF144AP50876 MIR4529-201ENST00000578110 78 ntBASIC2.44□□□□□ -2.02
RNF144AP50876 AC104996.3-201ENST00000590718 94 ntBASIC2.44□□□□□ -2.02
RNF144AP50876 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.44□□□□□ -2.02
RNF144AP50876 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RNF144AP50876 RNU6-132P-201ENST00000383863 107 ntBASIC2.43□□□□□ -2.02
RNF144AP50876 Y_RNA.491-201ENST00000384417 107 ntBASIC2.43□□□□□ -2.02
RNF144AP50876 MIR635-201ENST00000384830 98 ntBASIC2.43□□□□□ -2.02
RNF144AP50876 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RNF144AP50876 MIR548U-201ENST00000390728 81 ntBASIC2.43□□□□□ -2.02
RNF144AP50876 SNORD77.2-201ENST00000391045 68 ntBASIC2.43□□□□□ -2.02
RNF144AP50876 SNORD109B-201ENST00000458961 67 ntBASIC2.43□□□□□ -2.02
RNF144AP50876 SNORD109A-201ENST00000459128 67 ntBASIC2.43□□□□□ -2.02
RNF144AP50876 RNU6-70P-201ENST00000516438 60 ntBASIC2.43□□□□□ -2.02
RNF144AP50876 MIR3064-201ENST00000581130 66 ntBASIC2.43□□□□□ -2.02
RNF144AP50876 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RNF144AP50876 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
RNF144AP50876 MIR6073-201ENST00000352083 89 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 Y_RNA.264-201ENST00000364665 102 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 RNU6-466P-201ENST00000391224 103 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 RNA5SP21-201ENST00000410917 96 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 RNU7-62P-201ENST00000458856 62 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 RNU6-75P-201ENST00000515944 104 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 RNU6-1015P-201ENST00000517121 99 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 SNORA31.25-201ENST00000517242 134 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 MIR4319-201ENST00000577285 85 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 SNORD92-201ENST00000585078 85 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 AC245884.12-201ENST00000615364 59 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 MIR1297-201ENST00000637311 77 ntBASIC2.42□□□□□ -2.02
RNF144AP50876 SNORA5B-201ENST00000363786 132 ntBASIC2.41□□□□□ -2.02
RNF144AP50876 AC015818.7-201ENST00000428754 109 ntBASIC2.41□□□□□ -2.02
RNF144AP50876 AC108938.1-201ENST00000451204 136 ntBASIC2.41□□□□□ -2.02
RNF144AP50876 SNORA59A-201ENST00000459326 152 ntBASIC2.41□□□□□ -2.02
RNF144AP50876 Y_RNA.681-201ENST00000516445 113 ntBASIC2.41□□□□□ -2.02
RNF144AP50876 SNORA31.11-201ENST00000516528 139 ntBASIC2.41□□□□□ -2.02
RNF144AP50876 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RNF144AP50876 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RNF144AP50876 Y_RNA.510-201ENST00000384511 114 ntBASIC2.4□□□□□ -2.03
RNF144AP50876 MT-TF-201ENST00000387314 71 ntBASIC2.4□□□□□ -2.03
RNF144AP50876 RNU7-106P-201ENST00000459514 67 ntBASIC2.4□□□□□ -2.03
RNF144AP50876 AC125388.1-201ENST00000459631 156 ntBASIC2.4□□□□□ -2.03
RNF144AP50876 MIR2115-201ENST00000516657 100 ntBASIC2.4□□□□□ -2.03
RNF144AP50876 RNU6-531P-201ENST00000516694 104 ntBASIC2.4□□□□□ -2.03
RNF144AP50876 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.4□□□□□ -2.03
RNF144AP50876 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
RNF144AP50876 MIRLET7F1-201ENST00000362202 87 ntBASIC2.39□□□□□ -2.03
RNF144AP50876 RNU6-208P-201ENST00000362431 107 ntBASIC2.39□□□□□ -2.03
RNF144AP50876 SNORA3A-201ENST00000364113 130 ntBASIC2.39□□□□□ -2.03
RNF144AP50876 RNU6-53P-201ENST00000365367 106 ntBASIC2.39□□□□□ -2.03
RNF144AP50876 DEFA7P-201ENST00000382676 285 ntBASIC2.39□□□□□ -2.03
RNF144AP50876 SNORA6-201ENST00000384033 151 ntBASIC2.39□□□□□ -2.03
RNF144AP50876 Y_RNA.532-201ENST00000384590 113 ntBASIC2.39□□□□□ -2.03
RNF144AP50876 RNA5SP181-201ENST00000410246 98 ntBASIC2.39□□□□□ -2.03
RNF144AP50876 AL161935.2-201ENST00000414627 60 ntBASIC2.39□□□□□ -2.03
RNF144AP50876 JTBP1-201ENST00000441314 247 ntBASIC2.39□□□□□ -2.03
RNF144AP50876 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.39□□□□□ -2.03
RNF144AP50876 RNU6-947P-201ENST00000516264 106 ntBASIC2.39□□□□□ -2.03
RNF144AP50876 RNU7-193P-201ENST00000516723 65 ntBASIC2.39□□□□□ -2.03
RNF144AP50876 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RNF144AP50876 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
RNF144AP50876 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.38□□□□□ -2.03
RNF144AP50876 RNU4-58P-201ENST00000363192 141 ntBASIC2.38□□□□□ -2.03
RNF144AP50876 MIR9-1-201ENST00000385198 89 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms