Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 RNY4P28-201ENST00000365281 93 ntBASIC0.44□□□□□ -2.34
RXRGP48443 Y_RNA.626-201ENST00000411288 95 ntBASIC0.44□□□□□ -2.34
RXRGP48443 Y_RNA.121-201ENST00000363309 113 ntBASIC0.43□□□□□ -2.34
RXRGP48443 RNU6-818P-201ENST00000364837 108 ntBASIC0.43□□□□□ -2.34
RXRGP48443 RNU6-578P-201ENST00000390980 103 ntBASIC0.43□□□□□ -2.34
RXRGP48443 Y_RNA.617-201ENST00000410920 90 ntBASIC0.43□□□□□ -2.34
RXRGP48443 SNORA40.8-201ENST00000411034 126 ntBASIC0.43□□□□□ -2.34
RXRGP48443 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
RXRGP48443 U6.106-201ENST00000636360 105 ntBASIC0.43□□□□□ -2.34
RXRGP48443 Y_RNA.115-201ENST00000363272 98 ntBASIC0.42□□□□□ -2.34
RXRGP48443 RNU6-978P-201ENST00000364371 103 ntBASIC0.42□□□□□ -2.34
RXRGP48443 Y_RNA.447-201ENST00000384184 113 ntBASIC0.42□□□□□ -2.34
RXRGP48443 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
RXRGP48443 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
RXRGP48443 AP003327.1-201ENST00000529684 127 ntBASIC0.42□□□□□ -2.34
RXRGP48443 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.42□□□□□ -2.34
RXRGP48443 AC141273.2-201ENST00000618989 130 ntBASIC0.42□□□□□ -2.34
RXRGP48443 AC021613.1-201ENST00000623880 111 ntBASIC0.42□□□□□ -2.34
RXRGP48443 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
RXRGP48443 SNORA22.1-201ENST00000362701 134 ntBASIC0.41□□□□□ -2.34
RXRGP48443 SNORA25.7-201ENST00000364375 127 ntBASIC0.41□□□□□ -2.34
RXRGP48443 Y_RNA.412-201ENST00000384001 104 ntBASIC0.41□□□□□ -2.34
RXRGP48443 AC096949.1-201ENST00000412047 152 ntBASIC0.41□□□□□ -2.34
RXRGP48443 MTND3P2-201ENST00000438452 342 ntBASIC0.41□□□□□ -2.34
RXRGP48443 SCARNA15-202ENST00000516881 127 ntBASIC0.41□□□□□ -2.34
RXRGP48443 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
RXRGP48443 RNU6-403P-201ENST00000363163 104 ntBASIC0.4□□□□□ -2.35
RXRGP48443 RNU6-1099P-201ENST00000363533 107 ntBASIC0.4□□□□□ -2.35
RXRGP48443 Y_RNA.182-201ENST00000363880 111 ntBASIC0.4□□□□□ -2.35
RXRGP48443 RNU4-70P-201ENST00000384579 139 ntBASIC0.4□□□□□ -2.35
RXRGP48443 Y_RNA.571-201ENST00000384753 98 ntBASIC0.4□□□□□ -2.35
RXRGP48443 RNU6-918P-201ENST00000391219 106 ntBASIC0.4□□□□□ -2.35
RXRGP48443 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.4□□□□□ -2.35
RXRGP48443 MRPS18CP4-201ENST00000535821 231 ntBASIC0.4□□□□□ -2.35
RXRGP48443 AL109933.3-201ENST00000619095 188 ntBASIC0.4□□□□□ -2.35
RXRGP48443 MIR6841-201ENST00000637129 72 ntBASIC0.4□□□□□ -2.35
RXRGP48443 RNU6-1082P-201ENST00000364574 107 ntBASIC0.39□□□□□ -2.35
RXRGP48443 Y_RNA.274-201ENST00000364714 101 ntBASIC0.39□□□□□ -2.35
RXRGP48443 Y_RNA.350-201ENST00000365409 98 ntBASIC0.39□□□□□ -2.35
RXRGP48443 Y_RNA.374-201ENST00000365606 101 ntBASIC0.39□□□□□ -2.35
RXRGP48443 MIR518A1-201ENST00000385068 85 ntBASIC0.39□□□□□ -2.35
RXRGP48443 MIR624-201ENST00000385217 97 ntBASIC0.39□□□□□ -2.35
RXRGP48443 RNU6-1045P-201ENST00000516321 107 ntBASIC0.39□□□□□ -2.35
RXRGP48443 RNA5SP134-201ENST00000516492 96 ntBASIC0.39□□□□□ -2.35
RXRGP48443 RNA5SP94-201ENST00000516917 108 ntBASIC0.39□□□□□ -2.35
RXRGP48443 AC130289.1-201ENST00000577321 73 ntBASIC0.39□□□□□ -2.35
RXRGP48443 MIR3678-201ENST00000578455 94 ntBASIC0.39□□□□□ -2.35
RXRGP48443 AC062037.2-201ENST00000610137 73 ntBASIC0.39□□□□□ -2.35
RXRGP48443 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.39□□□□□ -2.35
RXRGP48443 MIR3658-201ENST00000636291 56 ntBASIC0.39□□□□□ -2.35
RXRGP48443 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
RXRGP48443 Y_RNA.171-201ENST00000363760 102 ntBASIC0.38□□□□□ -2.35
RXRGP48443 RNU5E-9P-201ENST00000411164 104 ntBASIC0.38□□□□□ -2.35
RXRGP48443 RNU6-1219P-201ENST00000516143 112 ntBASIC0.38□□□□□ -2.35
RXRGP48443 RNU6-1149P-201ENST00000516810 97 ntBASIC0.38□□□□□ -2.35
RXRGP48443 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
RXRGP48443 AC022523.2-201ENST00000561045 150 ntBASIC0.38□□□□□ -2.35
RXRGP48443 MIR8066-201ENST00000617280 78 ntBASIC0.38□□□□□ -2.35
RXRGP48443 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.38□□□□□ -2.35
RXRGP48443 Y_RNA.20-201ENST00000362479 113 ntBASIC0.37□□□□□ -2.35
RXRGP48443 Y_RNA.42-201ENST00000362660 108 ntBASIC0.37□□□□□ -2.35
RXRGP48443 RNA5SP517-201ENST00000364724 117 ntBASIC0.37□□□□□ -2.35
RXRGP48443 RNU6-643P-201ENST00000384018 107 ntBASIC0.37□□□□□ -2.35
RXRGP48443 Y_RNA.470-201ENST00000384307 117 ntBASIC0.37□□□□□ -2.35
RXRGP48443 Y_RNA.478-201ENST00000384358 107 ntBASIC0.37□□□□□ -2.35
RXRGP48443 RNU6-768P-201ENST00000384683 107 ntBASIC0.37□□□□□ -2.35
RXRGP48443 Y_RNA.567-201ENST00000384736 106 ntBASIC0.37□□□□□ -2.35
RXRGP48443 U8.15-201ENST00000390947 134 ntBASIC0.37□□□□□ -2.35
RXRGP48443 RNU6-135P-201ENST00000516769 101 ntBASIC0.37□□□□□ -2.35
RXRGP48443 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.37□□□□□ -2.35
RXRGP48443 MIR3149-201ENST00000584629 83 ntBASIC0.37□□□□□ -2.35
RXRGP48443 AC078938.1-201ENST00000620993 318 ntBASIC0.37□□□□□ -2.35
RXRGP48443 Y_RNA.30-201ENST00000362572 97 ntBASIC0.36□□□□□ -2.35
RXRGP48443 Y_RNA.85-201ENST00000363014 111 ntBASIC0.36□□□□□ -2.35
RXRGP48443 Y_RNA.174-201ENST00000363781 105 ntBASIC0.36□□□□□ -2.35
RXRGP48443 RNU6-1327P-201ENST00000365302 105 ntBASIC0.36□□□□□ -2.35
RXRGP48443 RNU6-196P-201ENST00000384315 107 ntBASIC0.36□□□□□ -2.35
RXRGP48443 SNORA72.6-201ENST00000384520 129 ntBASIC0.36□□□□□ -2.35
RXRGP48443 MIR644A-201ENST00000385262 94 ntBASIC0.36□□□□□ -2.35
RXRGP48443 SNORD58.1-201ENST00000391313 66 ntBASIC0.36□□□□□ -2.35
RXRGP48443 MIR1197-201ENST00000408818 88 ntBASIC0.36□□□□□ -2.35
RXRGP48443 MIR1270-201ENST00000459320 83 ntBASIC0.36□□□□□ -2.35
RXRGP48443 AC074198.2-201ENST00000508153 258 ntBASIC0.36□□□□□ -2.35
RXRGP48443 RNU2-60P-201ENST00000517290 128 ntBASIC0.36□□□□□ -2.35
RXRGP48443 AC141846.1-201ENST00000568348 142 ntBASIC0.36□□□□□ -2.35
RXRGP48443 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.36□□□□□ -2.35
RXRGP48443 MIR411-201ENST00000362239 96 ntBASIC0.35□□□□□ -2.35
RXRGP48443 RNU6-716P-201ENST00000365621 103 ntBASIC0.35□□□□□ -2.35
RXRGP48443 Y_RNA.521-201ENST00000384560 114 ntBASIC0.35□□□□□ -2.35
RXRGP48443 AL078595.1-201ENST00000404458 226 ntBASIC0.35□□□□□ -2.35
RXRGP48443 RNU6-863P-201ENST00000515989 104 ntBASIC0.35□□□□□ -2.35
RXRGP48443 RNU6-765P-201ENST00000516916 99 ntBASIC0.35□□□□□ -2.35
RXRGP48443 SNORA25.18-201ENST00000607153 114 ntBASIC0.35□□□□□ -2.35
RXRGP48443 MIR6082-201ENST00000613604 109 ntBASIC0.35□□□□□ -2.35
RXRGP48443 U4.1-201ENST00000620349 87 ntBASIC0.35□□□□□ -2.35
RXRGP48443 MIR103A1-201ENST00000362165 78 ntBASIC0.34□□□□□ -2.36
RXRGP48443 Y_RNA.13-201ENST00000362403 112 ntBASIC0.34□□□□□ -2.36
RXRGP48443 Y_RNA.52-201ENST00000362760 96 ntBASIC0.34□□□□□ -2.36
RXRGP48443 SNORA20.1-201ENST00000364790 130 ntBASIC0.34□□□□□ -2.36
RXRGP48443 RNU6-588P-201ENST00000410281 105 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms