Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 RNU6-766P-201ENST00000362478 107 ntBASIC1.78□□□□□ -2.12
LTBRP36941 RNU6-363P-201ENST00000362895 105 ntBASIC1.78□□□□□ -2.12
LTBRP36941 RNU4-67P-201ENST00000364569 141 ntBASIC1.78□□□□□ -2.12
LTBRP36941 RNU6-32P-201ENST00000383948 107 ntBASIC1.78□□□□□ -2.12
LTBRP36941 RNU6-13P-201ENST00000384248 107 ntBASIC1.78□□□□□ -2.12
LTBRP36941 RNU6-12P-201ENST00000384604 107 ntBASIC1.78□□□□□ -2.12
LTBRP36941 RNU6-41P-201ENST00000384741 107 ntBASIC1.78□□□□□ -2.12
LTBRP36941 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.78□□□□□ -2.12
LTBRP36941 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.78□□□□□ -2.12
LTBRP36941 AL512310.8-201ENST00000550183 120 ntBASIC1.78□□□□□ -2.12
LTBRP36941 FAM71BP1-201ENST00000604431 523 ntBASIC1.78□□□□□ -2.12
LTBRP36941 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LTBRP36941 MIR103A2-201ENST00000362154 78 ntBASIC1.77□□□□□ -2.13
LTBRP36941 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
LTBRP36941 Y_RNA.328-201ENST00000365208 113 ntBASIC1.77□□□□□ -2.13
LTBRP36941 RNU6-409P-201ENST00000384114 104 ntBASIC1.77□□□□□ -2.13
LTBRP36941 Y_RNA.495-201ENST00000384435 112 ntBASIC1.77□□□□□ -2.13
LTBRP36941 RNU1-78P-201ENST00000391248 165 ntBASIC1.77□□□□□ -2.13
LTBRP36941 SNORA7.5-201ENST00000410672 110 ntBASIC1.77□□□□□ -2.13
LTBRP36941 RNU6-1086P-201ENST00000410930 100 ntBASIC1.77□□□□□ -2.13
LTBRP36941 AC244023.1-201ENST00000426884 112 ntBASIC1.77□□□□□ -2.13
LTBRP36941 RNU6-168P-201ENST00000516189 101 ntBASIC1.77□□□□□ -2.13
LTBRP36941 MIR2115-201ENST00000516657 100 ntBASIC1.77□□□□□ -2.13
LTBRP36941 AP003716.2-201ENST00000528260 108 ntBASIC1.77□□□□□ -2.13
LTBRP36941 AC141557.1-201ENST00000540982 400 ntBASIC1.77□□□□□ -2.13
LTBRP36941 AL078603.1-201ENST00000603824 313 ntBASIC1.77□□□□□ -2.13
LTBRP36941 AC242498.1-201ENST00000604134 111 ntBASIC1.77□□□□□ -2.13
LTBRP36941 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
LTBRP36941 RNU1-42P-201ENST00000364033 160 ntBASIC1.76□□□□□ -2.13
LTBRP36941 RNU6-60P-201ENST00000364792 103 ntBASIC1.76□□□□□ -2.13
LTBRP36941 RNU6-1113P-201ENST00000384348 107 ntBASIC1.76□□□□□ -2.13
LTBRP36941 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
LTBRP36941 RNA5SP237-201ENST00000410414 113 ntBASIC1.76□□□□□ -2.13
LTBRP36941 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.76□□□□□ -2.13
LTBRP36941 RN7SL274P-201ENST00000492268 272 ntBASIC1.76□□□□□ -2.13
LTBRP36941 RNU7-79P-201ENST00000516082 62 ntBASIC1.76□□□□□ -2.13
LTBRP36941 RNU1-40P-201ENST00000516816 164 ntBASIC1.76□□□□□ -2.13
LTBRP36941 RNU1-97P-201ENST00000516872 164 ntBASIC1.76□□□□□ -2.13
LTBRP36941 RNU6-165P-201ENST00000517170 99 ntBASIC1.76□□□□□ -2.13
LTBRP36941 MIR4422-201ENST00000581938 83 ntBASIC1.76□□□□□ -2.13
LTBRP36941 MIR4448-201ENST00000584360 86 ntBASIC1.76□□□□□ -2.13
LTBRP36941 MIR6734-201ENST00000621166 68 ntBASIC1.76□□□□□ -2.13
LTBRP36941 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.76□□□□□ -2.13
LTBRP36941 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
LTBRP36941 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.76□□□□□ -2.13
LTBRP36941 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LTBRP36941 RNA5SP264-201ENST00000363115 107 ntBASIC1.75□□□□□ -2.13
LTBRP36941 MIR1185-1-201ENST00000408598 86 ntBASIC1.75□□□□□ -2.13
LTBRP36941 RNA5SP89-201ENST00000410300 108 ntBASIC1.75□□□□□ -2.13
LTBRP36941 RNU6-733P-201ENST00000410759 104 ntBASIC1.75□□□□□ -2.13
LTBRP36941 RPS27P16-201ENST00000425758 201 ntBASIC1.75□□□□□ -2.13
LTBRP36941 RNU6-521P-201ENST00000516663 105 ntBASIC1.75□□□□□ -2.13
LTBRP36941 MIR4452-201ENST00000583004 71 ntBASIC1.75□□□□□ -2.13
LTBRP36941 AP000753.3-201ENST00000604083 169 ntBASIC1.75□□□□□ -2.13
LTBRP36941 AL161722.3-201ENST00000605789 2983 ntBASIC1.74□□□□□ -2.13
LTBRP36941 Y_RNA.191-201ENST00000363972 113 ntBASIC1.74□□□□□ -2.13
LTBRP36941 MIR588-201ENST00000384900 83 ntBASIC1.74□□□□□ -2.13
LTBRP36941 MIR605-201ENST00000385078 83 ntBASIC1.74□□□□□ -2.13
LTBRP36941 SNORA19.1-201ENST00000410656 129 ntBASIC1.74□□□□□ -2.13
LTBRP36941 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.74□□□□□ -2.13
LTBRP36941 RNU1-123P-201ENST00000458950 160 ntBASIC1.74□□□□□ -2.13
LTBRP36941 RNA5SP220-201ENST00000516298 104 ntBASIC1.74□□□□□ -2.13
LTBRP36941 RNU11-2P-201ENST00000516898 142 ntBASIC1.74□□□□□ -2.13
LTBRP36941 MIR6516-201ENST00000630554 81 ntBASIC1.74□□□□□ -2.13
LTBRP36941 AP000553.5-201ENST00000641933 54 ntBASIC1.74□□□□□ -2.13
LTBRP36941 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LTBRP36941 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LTBRP36941 SNORA7.1-201ENST00000363750 139 ntBASIC1.73□□□□□ -2.13
LTBRP36941 RNU6-205P-201ENST00000390858 107 ntBASIC1.73□□□□□ -2.13
LTBRP36941 snoU13.2-201ENST00000459201 104 ntBASIC1.73□□□□□ -2.13
LTBRP36941 RN7SKP88-201ENST00000516847 250 ntBASIC1.73□□□□□ -2.13
LTBRP36941 RNA5SP102-201ENST00000516865 106 ntBASIC1.73□□□□□ -2.13
LTBRP36941 RNU6-537P-201ENST00000517277 103 ntBASIC1.73□□□□□ -2.13
LTBRP36941 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.73□□□□□ -2.13
LTBRP36941 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
LTBRP36941 MIR4264-201ENST00000583520 66 ntBASIC1.73□□□□□ -2.13
LTBRP36941 7SK.8-201ENST00000612110 250 ntBASIC1.73□□□□□ -2.13
LTBRP36941 7SK.11-201ENST00000615477 250 ntBASIC1.73□□□□□ -2.13
LTBRP36941 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.73□□□□□ -2.13
LTBRP36941 RMST_2.1-201ENST00000617263 136 ntBASIC1.73□□□□□ -2.13
LTBRP36941 MIR6779-201ENST00000617283 64 ntBASIC1.73□□□□□ -2.13
LTBRP36941 7SK.13-201ENST00000622040 250 ntBASIC1.73□□□□□ -2.13
LTBRP36941 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LTBRP36941 SNORD114-26-201ENST00000363543 72 ntBASIC1.72□□□□□ -2.13
LTBRP36941 Y_RNA.360-201ENST00000365512 102 ntBASIC1.72□□□□□ -2.13
LTBRP36941 RNU6-679P-201ENST00000391003 106 ntBASIC1.72□□□□□ -2.13
LTBRP36941 MIR934-201ENST00000401241 83 ntBASIC1.72□□□□□ -2.13
LTBRP36941 RNU2-40P-201ENST00000410833 196 ntBASIC1.72□□□□□ -2.13
LTBRP36941 RNU7-2P-201ENST00000516096 62 ntBASIC1.72□□□□□ -2.13
LTBRP36941 SNORD67.1-201ENST00000516618 108 ntBASIC1.72□□□□□ -2.13
LTBRP36941 AC141846.1-201ENST00000568348 142 ntBASIC1.72□□□□□ -2.13
LTBRP36941 SNORD53B-201ENST00000577887 78 ntBASIC1.72□□□□□ -2.13
LTBRP36941 AL662814.1-201ENST00000617364 121 ntBASIC1.72□□□□□ -2.13
LTBRP36941 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
LTBRP36941 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
LTBRP36941 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LTBRP36941 Y_RNA.78-201ENST00000362970 110 ntBASIC1.71□□□□□ -2.14
LTBRP36941 SNORD115-35-201ENST00000365122 82 ntBASIC1.71□□□□□ -2.14
LTBRP36941 MIR206-201ENST00000384872 86 ntBASIC1.71□□□□□ -2.14
LTBRP36941 MIR590-201ENST00000385008 97 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms