Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 RNA5SP47-201ENST00000517230 109 ntBASIC0.09□□□□□ -2.4
KRT20P35900 MIR4639-201ENST00000584938 69 ntBASIC0.09□□□□□ -2.4
KRT20P35900 MIR7107-201ENST00000611489 80 ntBASIC0.09□□□□□ -2.4
KRT20P35900 Y_RNA.36-201ENST00000362602 112 ntBASIC0.08□□□□□ -2.4
KRT20P35900 Y_RNA.76-201ENST00000362931 109 ntBASIC0.08□□□□□ -2.4
KRT20P35900 RNU6-1160P-201ENST00000384546 104 ntBASIC0.08□□□□□ -2.4
KRT20P35900 RNU6-1149P-201ENST00000516810 97 ntBASIC0.08□□□□□ -2.4
KRT20P35900 AC023932.2-201ENST00000603176 175 ntBASIC0.08□□□□□ -2.4
KRT20P35900 AC091304.10-201ENST00000641554 121 ntBASIC0.08□□□□□ -2.4
KRT20P35900 RNU4-67P-201ENST00000364569 141 ntBASIC0.07□□□□□ -2.4
KRT20P35900 Y_RNA.476-201ENST00000384347 108 ntBASIC0.07□□□□□ -2.4
KRT20P35900 MIR548H3-201ENST00000408771 118 ntBASIC0.07□□□□□ -2.4
KRT20P35900 RNU6-1153P-201ENST00000516760 105 ntBASIC0.07□□□□□ -2.4
KRT20P35900 Y_RNA.697-201ENST00000516776 113 ntBASIC0.07□□□□□ -2.4
KRT20P35900 Y_RNA.757-201ENST00000578934 114 ntBASIC0.07□□□□□ -2.4
KRT20P35900 SNORA9.1-201ENST00000362412 131 ntBASIC0.06□□□□□ -2.4
KRT20P35900 Y_RNA.277-201ENST00000364754 102 ntBASIC0.06□□□□□ -2.4
KRT20P35900 SNORD28-201ENST00000384706 75 ntBASIC0.06□□□□□ -2.4
KRT20P35900 RNU6-535P-201ENST00000384722 107 ntBASIC0.06□□□□□ -2.4
KRT20P35900 RNA5SP227-201ENST00000516184 113 ntBASIC0.06□□□□□ -2.4
KRT20P35900 Y_RNA.54-201ENST00000362766 105 ntBASIC0.05□□□□□ -2.4
KRT20P35900 RNU6-643P-201ENST00000384018 107 ntBASIC0.05□□□□□ -2.4
KRT20P35900 RNY1P6-201ENST00000384193 109 ntBASIC0.05□□□□□ -2.4
KRT20P35900 MTND1P19-201ENST00000511780 315 ntBASIC0.05□□□□□ -2.4
KRT20P35900 Y_RNA.797-201ENST00000515977 94 ntBASIC0.05□□□□□ -2.4
KRT20P35900 AP003072.1-201ENST00000531740 145 ntBASIC0.05□□□□□ -2.4
KRT20P35900 MIR1273G-201ENST00000577677 100 ntBASIC0.05□□□□□ -2.4
KRT20P35900 SNORA25.7-201ENST00000364375 127 ntBASIC0.04□□□□□ -2.4
KRT20P35900 RNY4P28-201ENST00000365281 93 ntBASIC0.04□□□□□ -2.4
KRT20P35900 RNU6-1126P-201ENST00000384002 107 ntBASIC0.04□□□□□ -2.4
KRT20P35900 SUMO1P3-201ENST00000439961 304 ntBASIC0.04□□□□□ -2.4
KRT20P35900 SNORA25.16-201ENST00000516741 121 ntBASIC0.04□□□□□ -2.4
KRT20P35900 RNU7-35P-201ENST00000517174 62 ntBASIC0.04□□□□□ -2.4
KRT20P35900 MTND5P34-201ENST00000568888 325 ntBASIC0.04□□□□□ -2.4
KRT20P35900 MIR6755-201ENST00000619993 66 ntBASIC0.04□□□□□ -2.4
KRT20P35900 MIR330-201ENST00000362196 94 ntBASIC0.03□□□□□ -2.4
KRT20P35900 RNU4-16P-201ENST00000364737 141 ntBASIC0.03□□□□□ -2.4
KRT20P35900 Y_RNA.308-201ENST00000365043 101 ntBASIC0.03□□□□□ -2.4
KRT20P35900 Y_RNA.396-201ENST00000383949 103 ntBASIC0.03□□□□□ -2.4
KRT20P35900 AC069271.1-201ENST00000445577 156 ntBASIC0.03□□□□□ -2.4
KRT20P35900 RNU7-79P-201ENST00000516082 62 ntBASIC0.03□□□□□ -2.4
KRT20P35900 RNU6-1258P-201ENST00000516911 111 ntBASIC0.03□□□□□ -2.4
KRT20P35900 AL117187.1-201ENST00000555482 181 ntBASIC0.03□□□□□ -2.4
KRT20P35900 RNU2-4P-201ENST00000606190 192 ntBASIC0.03□□□□□ -2.4
KRT20P35900 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
KRT20P35900 MTND5P32-201ENST00000560711 1802 ntBASIC0.02□□□□□ -2.41
KRT20P35900 Y_RNA.145-201ENST00000363527 102 ntBASIC0.02□□□□□ -2.41
KRT20P35900 Y_RNA.326-201ENST00000365176 113 ntBASIC0.02□□□□□ -2.41
KRT20P35900 MIRLET7F2-201ENST00000385277 83 ntBASIC0.02□□□□□ -2.41
KRT20P35900 RNA5SP144-201ENST00000410846 116 ntBASIC0.02□□□□□ -2.41
KRT20P35900 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.02□□□□□ -2.41
KRT20P35900 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
KRT20P35900 RNU4-58P-201ENST00000363192 141 ntBASIC0.01□□□□□ -2.41
KRT20P35900 RNU4-70P-201ENST00000384579 139 ntBASIC0.01□□□□□ -2.41
KRT20P35900 Y_RNA.562-201ENST00000384695 113 ntBASIC0.01□□□□□ -2.41
KRT20P35900 SNORD127-201ENST00000458892 86 ntBASIC0.01□□□□□ -2.41
KRT20P35900 SNORD115-2-201ENST00000362842 82 ntBASIC0□□□□□ -2.41
KRT20P35900 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
KRT20P35900 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
KRT20P35900 Y_RNA.288-201ENST00000364854 92 ntBASIC0□□□□□ -2.41
KRT20P35900 SNORD115-20-201ENST00000365099 82 ntBASIC0□□□□□ -2.41
KRT20P35900 RNY3P16-201ENST00000516338 101 ntBASIC0□□□□□ -2.41
KRT20P35900 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0□□□□□ -2.41
KRT20P35900 AC244669.1-204ENST00000621564 178 ntBASIC0□□□□□ -2.41
KRT20P35900 MIR411-201ENST00000362239 96 ntBASIC-0.01□□□□□ -2.41
KRT20P35900 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.01□□□□□ -2.41
KRT20P35900 RNU6-275P-201ENST00000364910 107 ntBASIC-0.01□□□□□ -2.41
KRT20P35900 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.01□□□□□ -2.41
KRT20P35900 SNORD58.1-201ENST00000391313 66 ntBASIC-0.01□□□□□ -2.41
KRT20P35900 RNU6-493P-201ENST00000391321 108 ntBASIC-0.01□□□□□ -2.41
KRT20P35900 RNU2-38P-201ENST00000410856 79 ntBASIC-0.01□□□□□ -2.41
KRT20P35900 AL022718.1-201ENST00000412004 84 ntBASIC-0.01□□□□□ -2.41
KRT20P35900 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
KRT20P35900 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.01□□□□□ -2.41
KRT20P35900 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
KRT20P35900 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.01□□□□□ -2.41
KRT20P35900 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.01□□□□□ -2.41
KRT20P35900 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.02□□□□□ -2.41
KRT20P35900 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.02□□□□□ -2.41
KRT20P35900 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
KRT20P35900 RNU7-113P-201ENST00000459273 62 ntBASIC-0.02□□□□□ -2.41
KRT20P35900 MIR8087-201ENST00000612745 78 ntBASIC-0.02□□□□□ -2.41
KRT20P35900 MIR6718-201ENST00000616153 80 ntBASIC-0.02□□□□□ -2.41
KRT20P35900 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.03□□□□□ -2.41
KRT20P35900 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.03□□□□□ -2.41
KRT20P35900 MIR606-201ENST00000384851 96 ntBASIC-0.03□□□□□ -2.41
KRT20P35900 RNA5SP63-201ENST00000391225 112 ntBASIC-0.03□□□□□ -2.41
KRT20P35900 AL358176.2-201ENST00000425769 204 ntBASIC-0.03□□□□□ -2.41
KRT20P35900 DEFB131E-201ENST00000532329 154 ntBASIC-0.03□□□□□ -2.41
KRT20P35900 MIR7111-201ENST00000619751 72 ntBASIC-0.03□□□□□ -2.41
KRT20P35900 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.04□□□□□ -2.42
KRT20P35900 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.04□□□□□ -2.42
KRT20P35900 PCNPP3-201ENST00000393579 471 ntBASIC-0.04□□□□□ -2.42
KRT20P35900 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
KRT20P35900 RNU6-531P-201ENST00000516694 104 ntBASIC-0.04□□□□□ -2.42
KRT20P35900 RNA5SP480-201ENST00000516840 109 ntBASIC-0.04□□□□□ -2.42
KRT20P35900 AC104408.1-201ENST00000605241 170 ntBASIC-0.04□□□□□ -2.42
KRT20P35900 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.05□□□□□ -2.42
KRT20P35900 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
KRT20P35900 RNA5SP133-201ENST00000363368 119 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms