Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 U8.15-201ENST00000390947 134 ntBASIC1.84□□□□□ -2.11
CTGFP29279 RNA5SP212-201ENST00000391223 107 ntBASIC1.84□□□□□ -2.11
CTGFP29279 Y_RNA.609-201ENST00000410669 89 ntBASIC1.84□□□□□ -2.11
CTGFP29279 RNU6-1190P-201ENST00000410811 104 ntBASIC1.84□□□□□ -2.11
CTGFP29279 AC090255.1-201ENST00000495779 349 ntBASIC1.84□□□□□ -2.11
CTGFP29279 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.84□□□□□ -2.11
CTGFP29279 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.84□□□□□ -2.11
CTGFP29279 SNORD53B-201ENST00000577887 78 ntBASIC1.84□□□□□ -2.11
CTGFP29279 MIR4712-201ENST00000583750 82 ntBASIC1.84□□□□□ -2.11
CTGFP29279 RNU6-86P-201ENST00000606534 107 ntBASIC1.84□□□□□ -2.11
CTGFP29279 MIR6840-201ENST00000611937 71 ntBASIC1.84□□□□□ -2.11
CTGFP29279 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.84□□□□□ -2.11
CTGFP29279 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CTGFP29279 RNU6-833P-201ENST00000363486 107 ntBASIC1.83□□□□□ -2.12
CTGFP29279 SNORD114-22-201ENST00000365423 72 ntBASIC1.83□□□□□ -2.12
CTGFP29279 Y_RNA.410-201ENST00000383992 113 ntBASIC1.83□□□□□ -2.12
CTGFP29279 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
CTGFP29279 RNU2-11P-201ENST00000459191 187 ntBASIC1.83□□□□□ -2.12
CTGFP29279 RNU7-70P-201ENST00000516941 66 ntBASIC1.83□□□□□ -2.12
CTGFP29279 MIR4421-201ENST00000578133 69 ntBASIC1.83□□□□□ -2.12
CTGFP29279 MIR548AE2-201ENST00000583456 67 ntBASIC1.83□□□□□ -2.12
CTGFP29279 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.83□□□□□ -2.12
CTGFP29279 RNA5SP37-201ENST00000365420 130 ntBASIC1.82□□□□□ -2.12
CTGFP29279 SNORA32-201ENST00000384072 121 ntBASIC1.82□□□□□ -2.12
CTGFP29279 SNORA18-201ENST00000384416 132 ntBASIC1.82□□□□□ -2.12
CTGFP29279 AC090844.1-201ENST00000422019 156 ntBASIC1.82□□□□□ -2.12
CTGFP29279 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.82□□□□□ -2.12
CTGFP29279 RNU7-12P-201ENST00000516030 62 ntBASIC1.82□□□□□ -2.12
CTGFP29279 RNU6-523P-201ENST00000516304 54 ntBASIC1.82□□□□□ -2.12
CTGFP29279 Y_RNA.705-201ENST00000516862 110 ntBASIC1.82□□□□□ -2.12
CTGFP29279 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.82□□□□□ -2.12
CTGFP29279 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CTGFP29279 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CTGFP29279 MIR96-201ENST00000362288 78 ntBASIC1.81□□□□□ -2.12
CTGFP29279 RNU6-1163P-201ENST00000364516 107 ntBASIC1.81□□□□□ -2.12
CTGFP29279 SNORA6-201ENST00000384033 151 ntBASIC1.81□□□□□ -2.12
CTGFP29279 MIR660-201ENST00000385235 97 ntBASIC1.81□□□□□ -2.12
CTGFP29279 RNU7-181P-201ENST00000517234 74 ntBASIC1.81□□□□□ -2.12
CTGFP29279 MIR4287-201ENST00000579398 78 ntBASIC1.81□□□□□ -2.12
CTGFP29279 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CTGFP29279 MIR424-201ENST00000362227 98 ntBASIC1.8□□□□□ -2.12
CTGFP29279 SNORD45B-201ENST00000364617 72 ntBASIC1.8□□□□□ -2.12
CTGFP29279 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
CTGFP29279 RNU6-613P-201ENST00000410412 108 ntBASIC1.8□□□□□ -2.12
CTGFP29279 AC244636.1-201ENST00000421152 228 ntBASIC1.8□□□□□ -2.12
CTGFP29279 RNU7-153P-201ENST00000516455 62 ntBASIC1.8□□□□□ -2.12
CTGFP29279 AL773524.1-201ENST00000614065 229 ntBASIC1.8□□□□□ -2.12
CTGFP29279 AC021613.1-201ENST00000623880 111 ntBASIC1.8□□□□□ -2.12
CTGFP29279 AP000553.5-201ENST00000641933 54 ntBASIC1.8□□□□□ -2.12
CTGFP29279 AL442644.1-201ENST00000454390 3105 ntBASIC1.8□□□□□ -2.12
CTGFP29279 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
CTGFP29279 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
CTGFP29279 AC008163.1-202ENST00000636004 2889 ntBASIC1.79□□□□□ -2.12
CTGFP29279 RNU6-633P-201ENST00000362612 103 ntBASIC1.79□□□□□ -2.12
CTGFP29279 Y_RNA.607-201ENST00000410597 98 ntBASIC1.79□□□□□ -2.12
CTGFP29279 RNU6-1006P-201ENST00000516998 103 ntBASIC1.79□□□□□ -2.12
CTGFP29279 SNORD3E-202ENST00000627253 216 ntBASIC1.79□□□□□ -2.12
CTGFP29279 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CTGFP29279 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CTGFP29279 AL596028.1-201ENST00000326971 197 ntBASIC1.78□□□□□ -2.12
CTGFP29279 RNU6-1123P-201ENST00000362347 106 ntBASIC1.78□□□□□ -2.12
CTGFP29279 RNU6-478P-201ENST00000363904 110 ntBASIC1.78□□□□□ -2.12
CTGFP29279 Y_RNA.241-201ENST00000364470 117 ntBASIC1.78□□□□□ -2.12
CTGFP29279 RNA5SP138-201ENST00000365098 114 ntBASIC1.78□□□□□ -2.12
CTGFP29279 Y_RNA.377-201ENST00000365644 108 ntBASIC1.78□□□□□ -2.12
CTGFP29279 MIR452-201ENST00000385020 85 ntBASIC1.78□□□□□ -2.12
CTGFP29279 SNORA67.6-201ENST00000391093 99 ntBASIC1.78□□□□□ -2.12
CTGFP29279 RNU4-69P-201ENST00000410677 143 ntBASIC1.78□□□□□ -2.12
CTGFP29279 AC015922.2-201ENST00000435593 184 ntBASIC1.78□□□□□ -2.12
CTGFP29279 AL512310.12-203ENST00000640543 90 ntBASIC1.78□□□□□ -2.12
CTGFP29279 ZNF209P-201ENST00000593450 2304 ntBASIC1.77□□□□□ -2.13
CTGFP29279 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CTGFP29279 RNU6-1313P-201ENST00000362622 102 ntBASIC1.77□□□□□ -2.13
CTGFP29279 SNORA27-201ENST00000384323 126 ntBASIC1.77□□□□□ -2.13
CTGFP29279 MIR34C-201ENST00000384831 77 ntBASIC1.77□□□□□ -2.13
CTGFP29279 MIR17-201ENST00000385012 84 ntBASIC1.77□□□□□ -2.13
CTGFP29279 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CTGFP29279 AL022718.1-201ENST00000412004 84 ntBASIC1.77□□□□□ -2.13
CTGFP29279 RPL31P63-201ENST00000422565 375 ntBASIC1.77□□□□□ -2.13
CTGFP29279 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.77□□□□□ -2.13
CTGFP29279 RNU6-998P-201ENST00000515894 101 ntBASIC1.77□□□□□ -2.13
CTGFP29279 RNA5SP33-201ENST00000516687 98 ntBASIC1.77□□□□□ -2.13
CTGFP29279 RNA5SP480-201ENST00000516840 109 ntBASIC1.77□□□□□ -2.13
CTGFP29279 AC090821.2-201ENST00000523552 176 ntBASIC1.77□□□□□ -2.13
CTGFP29279 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.77□□□□□ -2.13
CTGFP29279 AL157834.3-201ENST00000615543 103 ntBASIC1.77□□□□□ -2.13
CTGFP29279 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CTGFP29279 SNORD115-39-201ENST00000363694 82 ntBASIC1.76□□□□□ -2.13
CTGFP29279 RNU6-342P-201ENST00000384521 104 ntBASIC1.76□□□□□ -2.13
CTGFP29279 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CTGFP29279 HMGN1P33-201ENST00000432945 451 ntBASIC1.76□□□□□ -2.13
CTGFP29279 RPL23AP6-201ENST00000446637 472 ntBASIC1.76□□□□□ -2.13
CTGFP29279 AC093850.1-201ENST00000454121 251 ntBASIC1.76□□□□□ -2.13
CTGFP29279 RNU7-113P-201ENST00000459273 62 ntBASIC1.76□□□□□ -2.13
CTGFP29279 MIR4778-201ENST00000577635 80 ntBASIC1.76□□□□□ -2.13
CTGFP29279 MIR4299-201ENST00000577899 72 ntBASIC1.76□□□□□ -2.13
CTGFP29279 MIR4713-201ENST00000582691 75 ntBASIC1.76□□□□□ -2.13
CTGFP29279 AC145423.2-201ENST00000610631 239 ntBASIC1.76□□□□□ -2.13
CTGFP29279 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.76□□□□□ -2.13
CTGFP29279 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms