Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MIR563-201ENST00000385080 79 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 MIR548H3-201ENST00000408771 118 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 RNA5SP261-201ENST00000410536 106 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 AL121914.1-201ENST00000450188 156 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 RNU7-96P-201ENST00000459535 64 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
COL11A1P12107 MIR4771-2-201ENST00000577758 74 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 MIR3646-201ENST00000578301 84 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 MIR378D2-201ENST00000580636 98 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 MIR4771-1-201ENST00000582617 74 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 AL353765.1-201ENST00000605514 183 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 AC011603.4-201ENST00000611325 277 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 uc_338.6-201ENST00000613544 171 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 U6.106-201ENST00000636360 105 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 MIR6844-201ENST00000637122 62 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 AL596211.1-201ENST00000569873 2277 ntBASIC0.26□□□□□ -2.37
COL11A1P12107 Y_RNA.83-201ENST00000363005 113 ntBASIC0.26□□□□□ -2.37
COL11A1P12107 SNORA20.1-201ENST00000364790 130 ntBASIC0.26□□□□□ -2.37
COL11A1P12107 Y_RNA.299-201ENST00000364973 94 ntBASIC0.26□□□□□ -2.37
COL11A1P12107 RNY1P6-201ENST00000384193 109 ntBASIC0.26□□□□□ -2.37
COL11A1P12107 RNU6-913P-201ENST00000390913 95 ntBASIC0.26□□□□□ -2.37
COL11A1P12107 RNU6-1271P-201ENST00000517049 105 ntBASIC0.26□□□□□ -2.37
COL11A1P12107 MIR4308-201ENST00000580634 81 ntBASIC0.26□□□□□ -2.37
COL11A1P12107 Y_RNA.185-201ENST00000363894 100 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 Y_RNA.200-201ENST00000364018 102 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 Y_RNA.430-201ENST00000384081 110 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 Y_RNA.477-201ENST00000384352 108 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 Y_RNA.489-201ENST00000384410 101 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 RNU6-588P-201ENST00000410281 105 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 Y_RNA.797-201ENST00000515977 94 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 RNA5SP236-201ENST00000516169 116 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.25□□□□□ -2.37
COL11A1P12107 MRPS18CP4-201ENST00000535821 231 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 MIR4503-201ENST00000582187 83 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 DNAJC19P2-201ENST00000593340 302 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 RNU6-94P-201ENST00000607728 107 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 AL136317.1-201ENST00000612653 226 ntBASIC0.25□□□□□ -2.37
COL11A1P12107 MIR18A-201ENST00000362310 71 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 Y_RNA.307-201ENST00000365022 117 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 Y_RNA.452-201ENST00000384202 108 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 Y_RNA.542-201ENST00000384641 111 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 MIR573-201ENST00000384964 99 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 RNU6-918P-201ENST00000391219 106 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 Y_RNA.668-201ENST00000516233 93 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 SNORD36C-201ENST00000516733 66 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
COL11A1P12107 Y_RNA.42-201ENST00000362660 108 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 Y_RNA.121-201ENST00000363309 113 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 RNU6-643P-201ENST00000384018 107 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 Y_RNA.515-201ENST00000384535 112 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 SNORA20-201ENST00000384662 132 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 RNU6-1135P-201ENST00000411083 103 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 AF228730.3-201ENST00000436691 102 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 SEPT7P4-201ENST00000437076 306 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 AL138752.1-201ENST00000452964 351 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 AC104692.1-201ENST00000472406 90 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 SCARNA15-202ENST00000516881 127 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 RNU7-35P-201ENST00000517174 62 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 RNU7-156P-201ENST00000517214 74 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.24□□□□□ -2.37
COL11A1P12107 MIR5197-201ENST00000583721 112 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.24□□□□□ -2.37
COL11A1P12107 RNU6-1292P-201ENST00000383856 107 ntBASIC0.23□□□□□ -2.37
COL11A1P12107 RNU6-47P-201ENST00000383866 107 ntBASIC0.23□□□□□ -2.37
COL11A1P12107 SNORA36.2-201ENST00000384004 127 ntBASIC0.23□□□□□ -2.37
COL11A1P12107 SNORD93-201ENST00000408813 74 ntBASIC0.23□□□□□ -2.37
COL11A1P12107 RNU6-1086P-201ENST00000410930 100 ntBASIC0.23□□□□□ -2.37
COL11A1P12107 RNA5SP222-201ENST00000411039 105 ntBASIC0.23□□□□□ -2.37
COL11A1P12107 SNORD83.1-201ENST00000411362 77 ntBASIC0.23□□□□□ -2.37
COL11A1P12107 IGKV1-22-201ENST00000524313 326 ntBASIC0.23□□□□□ -2.37
COL11A1P12107 AP002392.1-201ENST00000537692 208 ntBASIC0.23□□□□□ -2.37
COL11A1P12107 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.23□□□□□ -2.37
COL11A1P12107 MIR4667-201ENST00000578933 66 ntBASIC0.23□□□□□ -2.37
COL11A1P12107 MIR4493-201ENST00000584016 73 ntBASIC0.23□□□□□ -2.37
COL11A1P12107 MIR6717-201ENST00000622747 73 ntBASIC0.23□□□□□ -2.37
COL11A1P12107 Y_RNA.188-201ENST00000363952 111 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 RNU6-309P-201ENST00000364573 106 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 RNY1P13-201ENST00000365030 105 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 SNORD24-201ENST00000383884 75 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 Y_RNA.454-201ENST00000384224 113 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 Y_RNA.556-201ENST00000384677 113 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 RNU6-535P-201ENST00000384722 107 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 RNU6-1321P-201ENST00000390905 107 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 RNU6-1165P-201ENST00000410119 107 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 RNA5SP237-201ENST00000410414 113 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 AC096949.1-201ENST00000412047 152 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 RNU7-113P-201ENST00000459273 62 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 SNORA25.12-201ENST00000516202 82 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 RNU7-53P-201ENST00000516705 60 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 RNU6-1258P-201ENST00000516911 111 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 RNU6-388P-201ENST00000517012 105 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 RNU6-389P-201ENST00000517048 105 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 MIR3121-201ENST00000579680 77 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 AL162730.1-201ENST00000605734 292 ntBASIC0.22□□□□□ -2.37
COL11A1P12107 Y_RNA.8-201ENST00000362353 102 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 4579.1 ms