Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MIR4680-201ENST00000580906 66 ntBASIC-0.12□□□□□ -2.43
CD28P10747 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.12□□□□□ -2.43
CD28P10747 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.12□□□□□ -2.43
CD28P10747 AL442067.1-201ENST00000613261 223 ntBASIC-0.12□□□□□ -2.43
CD28P10747 AC134503.1-201ENST00000633048 54 ntBASIC-0.12□□□□□ -2.43
CD28P10747 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.13□□□□□ -2.43
CD28P10747 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.13□□□□□ -2.43
CD28P10747 SNORA18-201ENST00000384416 132 ntBASIC-0.13□□□□□ -2.43
CD28P10747 MTND5P22-201ENST00000458380 195 ntBASIC-0.13□□□□□ -2.43
CD28P10747 SNORA25.16-201ENST00000516741 121 ntBASIC-0.13□□□□□ -2.43
CD28P10747 U2.14-201ENST00000615943 113 ntBASIC-0.13□□□□□ -2.43
CD28P10747 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.13□□□□□ -2.43
CD28P10747 RNU6-978P-201ENST00000364371 103 ntBASIC-0.14□□□□□ -2.43
CD28P10747 SNORA72.6-201ENST00000384520 129 ntBASIC-0.14□□□□□ -2.43
CD28P10747 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.14□□□□□ -2.43
CD28P10747 MIR145-201ENST00000384967 88 ntBASIC-0.14□□□□□ -2.43
CD28P10747 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
CD28P10747 MIR892B-201ENST00000401279 77 ntBASIC-0.14□□□□□ -2.43
CD28P10747 AC113618.1-201ENST00000416747 285 ntBASIC-0.14□□□□□ -2.43
CD28P10747 RNU6-893P-201ENST00000458841 100 ntBASIC-0.14□□□□□ -2.43
CD28P10747 RNU6-561P-201ENST00000516222 102 ntBASIC-0.14□□□□□ -2.43
CD28P10747 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.14□□□□□ -2.43
CD28P10747 MIR4802-201ENST00000581881 80 ntBASIC-0.14□□□□□ -2.43
CD28P10747 RNU6-728P-201ENST00000365375 104 ntBASIC-0.15□□□□□ -2.43
CD28P10747 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.15□□□□□ -2.43
CD28P10747 RNU6-651P-201ENST00000411040 105 ntBASIC-0.15□□□□□ -2.43
CD28P10747 RNA5SP395-201ENST00000516567 118 ntBASIC-0.15□□□□□ -2.43
CD28P10747 RNU7-35P-201ENST00000517174 62 ntBASIC-0.15□□□□□ -2.43
CD28P10747 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.15□□□□□ -2.43
CD28P10747 AL360085.1-201ENST00000604713 532 ntBASIC-0.15□□□□□ -2.43
CD28P10747 AL365265.1-201ENST00000621045 234 ntBASIC-0.15□□□□□ -2.43
CD28P10747 MIR335-201ENST00000362173 94 ntBASIC-0.16□□□□□ -2.44
CD28P10747 RNA5SP245-201ENST00000364239 121 ntBASIC-0.16□□□□□ -2.44
CD28P10747 RNU6-302P-201ENST00000365249 107 ntBASIC-0.16□□□□□ -2.44
CD28P10747 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.16□□□□□ -2.44
CD28P10747 MIR624-201ENST00000385217 97 ntBASIC-0.16□□□□□ -2.44
CD28P10747 MIR548P-201ENST00000408336 84 ntBASIC-0.16□□□□□ -2.44
CD28P10747 SNORA79-201ENST00000408376 140 ntBASIC-0.16□□□□□ -2.44
CD28P10747 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.16□□□□□ -2.44
CD28P10747 AC244505.6-201ENST00000452829 130 ntBASIC-0.16□□□□□ -2.44
CD28P10747 RPL39P34-201ENST00000477141 156 ntBASIC-0.16□□□□□ -2.44
CD28P10747 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.16□□□□□ -2.44
CD28P10747 RNU6-570P-201ENST00000517051 105 ntBASIC-0.16□□□□□ -2.44
CD28P10747 MIR4636-201ENST00000582271 80 ntBASIC-0.16□□□□□ -2.44
CD28P10747 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
CD28P10747 RNU6-103P-201ENST00000363686 107 ntBASIC-0.17□□□□□ -2.44
CD28P10747 RNU6-726P-201ENST00000364680 107 ntBASIC-0.17□□□□□ -2.44
CD28P10747 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.17□□□□□ -2.44
CD28P10747 RNU4-17P-201ENST00000365598 141 ntBASIC-0.17□□□□□ -2.44
CD28P10747 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.17□□□□□ -2.44
CD28P10747 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.17□□□□□ -2.44
CD28P10747 MIR643-201ENST00000385267 97 ntBASIC-0.17□□□□□ -2.44
CD28P10747 RNU6-269P-201ENST00000391077 97 ntBASIC-0.17□□□□□ -2.44
CD28P10747 RNU7-129P-201ENST00000516128 62 ntBASIC-0.17□□□□□ -2.44
CD28P10747 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.17□□□□□ -2.44
CD28P10747 AL162376.1-201ENST00000624117 175 ntBASIC-0.17□□□□□ -2.44
CD28P10747 MIR1295B-201ENST00000636144 60 ntBASIC-0.17□□□□□ -2.44
CD28P10747 RNU4-58P-201ENST00000363192 141 ntBASIC-0.18□□□□□ -2.44
CD28P10747 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.18□□□□□ -2.44
CD28P10747 RNU7-79P-201ENST00000516082 62 ntBASIC-0.18□□□□□ -2.44
CD28P10747 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.18□□□□□ -2.44
CD28P10747 SNORD116-25-201ENST00000516517 92 ntBASIC-0.18□□□□□ -2.44
CD28P10747 AL442663.2-201ENST00000554385 511 ntBASIC-0.18□□□□□ -2.44
CD28P10747 MIR5589-201ENST00000579442 60 ntBASIC-0.18□□□□□ -2.44
CD28P10747 MIR4752-201ENST00000579672 72 ntBASIC-0.18□□□□□ -2.44
CD28P10747 MIR5706-201ENST00000579841 80 ntBASIC-0.18□□□□□ -2.44
CD28P10747 SNORD115-2-201ENST00000362842 82 ntBASIC-0.19□□□□□ -2.44
CD28P10747 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.19□□□□□ -2.44
CD28P10747 SNORD115-20-201ENST00000365099 82 ntBASIC-0.19□□□□□ -2.44
CD28P10747 RNU6-756P-201ENST00000383997 107 ntBASIC-0.19□□□□□ -2.44
CD28P10747 MIR593-201ENST00000384856 100 ntBASIC-0.19□□□□□ -2.44
CD28P10747 MIR501-201ENST00000390204 84 ntBASIC-0.19□□□□□ -2.44
CD28P10747 MIR1912-201ENST00000410389 80 ntBASIC-0.19□□□□□ -2.44
CD28P10747 MTATP6P23-201ENST00000440153 476 ntBASIC-0.19□□□□□ -2.44
CD28P10747 RNU6-531P-201ENST00000516694 104 ntBASIC-0.19□□□□□ -2.44
CD28P10747 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.19□□□□□ -2.44
CD28P10747 RNU7-70P-201ENST00000516941 66 ntBASIC-0.19□□□□□ -2.44
CD28P10747 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.19□□□□□ -2.44
CD28P10747 AC020661.2-201ENST00000560114 134 ntBASIC-0.19□□□□□ -2.44
CD28P10747 MIR548AD-201ENST00000584780 82 ntBASIC-0.19□□□□□ -2.44
CD28P10747 AC011921.3-201ENST00000605540 361 ntBASIC-0.19□□□□□ -2.44
CD28P10747 MIR499B-201ENST00000636498 73 ntBASIC-0.19□□□□□ -2.44
CD28P10747 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.19□□□□□ -2.44
CD28P10747 MTND5P32-201ENST00000560711 1802 ntBASIC-0.2□□□□□ -2.44
CD28P10747 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.2□□□□□ -2.44
CD28P10747 SNORA63.5-201ENST00000363548 123 ntBASIC-0.2□□□□□ -2.44
CD28P10747 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
CD28P10747 RNU6-702P-201ENST00000364982 107 ntBASIC-0.2□□□□□ -2.44
CD28P10747 MIR214-201ENST00000385214 110 ntBASIC-0.2□□□□□ -2.44
CD28P10747 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.2□□□□□ -2.44
CD28P10747 RNU6-985P-201ENST00000410182 104 ntBASIC-0.2□□□□□ -2.44
CD28P10747 RNA5SP144-201ENST00000410846 116 ntBASIC-0.2□□□□□ -2.44
CD28P10747 AC104692.1-201ENST00000472406 90 ntBASIC-0.2□□□□□ -2.44
CD28P10747 MIR378D2-201ENST00000580636 98 ntBASIC-0.2□□□□□ -2.44
CD28P10747 MIR3171-201ENST00000584270 74 ntBASIC-0.2□□□□□ -2.44
CD28P10747 RNA5SP133-201ENST00000363368 119 ntBASIC-0.21□□□□□ -2.44
CD28P10747 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.21□□□□□ -2.44
CD28P10747 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.21□□□□□ -2.44
CD28P10747 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.21□□□□□ -2.44
CD28P10747 RNY1P6-201ENST00000384193 109 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms