Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNA5SP59-201ENST00000410922 110 ntBASIC2.45□□□□□ -2.02
THBS1P07996 RNA5SP270-201ENST00000411361 118 ntBASIC2.45□□□□□ -2.02
THBS1P07996 SCARNA18B-201ENST00000458806 135 ntBASIC2.45□□□□□ -2.02
THBS1P07996 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.45□□□□□ -2.02
THBS1P07996 SNORD92-201ENST00000585078 85 ntBASIC2.45□□□□□ -2.02
THBS1P07996 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.45□□□□□ -2.02
THBS1P07996 MIR6715A-201ENST00000615929 79 ntBASIC2.45□□□□□ -2.02
THBS1P07996 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.45□□□□□ -2.02
THBS1P07996 Y_RNA.788-201ENST00000622394 112 ntBASIC2.45□□□□□ -2.02
THBS1P07996 RNU1-112P-201ENST00000364401 164 ntBASIC2.44□□□□□ -2.02
THBS1P07996 RNU6-396P-201ENST00000365369 105 ntBASIC2.44□□□□□ -2.02
THBS1P07996 RNU6-466P-201ENST00000391224 103 ntBASIC2.44□□□□□ -2.02
THBS1P07996 MIR5194-201ENST00000582634 120 ntBASIC2.44□□□□□ -2.02
THBS1P07996 MIR5092-201ENST00000583139 88 ntBASIC2.44□□□□□ -2.02
THBS1P07996 MIR4264-201ENST00000583520 66 ntBASIC2.44□□□□□ -2.02
THBS1P07996 RNU6-53P-201ENST00000365367 106 ntBASIC2.43□□□□□ -2.02
THBS1P07996 AC004965.1-201ENST00000413033 213 ntBASIC2.43□□□□□ -2.02
THBS1P07996 HSPE1P24-201ENST00000450782 238 ntBASIC2.43□□□□□ -2.02
THBS1P07996 RNU6-1108P-201ENST00000516308 104 ntBASIC2.43□□□□□ -2.02
THBS1P07996 SNORA18.5-201ENST00000516616 101 ntBASIC2.43□□□□□ -2.02
THBS1P07996 RNU6-448P-201ENST00000517052 107 ntBASIC2.43□□□□□ -2.02
THBS1P07996 AC104996.3-201ENST00000590718 94 ntBASIC2.43□□□□□ -2.02
THBS1P07996 AC067747.1-201ENST00000608026 250 ntBASIC2.43□□□□□ -2.02
THBS1P07996 AC010297.1-201ENST00000623948 149 ntBASIC2.43□□□□□ -2.02
THBS1P07996 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
THBS1P07996 RNU4-82P-201ENST00000362443 140 ntBASIC2.42□□□□□ -2.02
THBS1P07996 RNA5SP432-201ENST00000362480 116 ntBASIC2.42□□□□□ -2.02
THBS1P07996 MT-TF-201ENST00000387314 71 ntBASIC2.42□□□□□ -2.02
THBS1P07996 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
THBS1P07996 AC244023.1-201ENST00000426884 112 ntBASIC2.42□□□□□ -2.02
THBS1P07996 RNA5SP282-201ENST00000516355 108 ntBASIC2.42□□□□□ -2.02
THBS1P07996 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
THBS1P07996 AC242498.1-201ENST00000604134 111 ntBASIC2.42□□□□□ -2.02
THBS1P07996 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.42□□□□□ -2.02
THBS1P07996 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
THBS1P07996 SNORD36A-201ENST00000362874 73 ntBASIC2.41□□□□□ -2.02
THBS1P07996 RNA5SP393-201ENST00000363423 117 ntBASIC2.41□□□□□ -2.02
THBS1P07996 Y_RNA.283-201ENST00000364798 112 ntBASIC2.41□□□□□ -2.02
THBS1P07996 BX276092.1-201ENST00000427368 251 ntBASIC2.41□□□□□ -2.02
THBS1P07996 SUMO1P4-201ENST00000429430 302 ntBASIC2.41□□□□□ -2.02
THBS1P07996 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.41□□□□□ -2.02
THBS1P07996 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.41□□□□□ -2.02
THBS1P07996 FO624990.1-201ENST00000636373 85 ntBASIC2.41□□□□□ -2.02
THBS1P07996 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
THBS1P07996 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
THBS1P07996 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
THBS1P07996 RNU5F-1-201ENST00000362507 117 ntBASIC2.4□□□□□ -2.03
THBS1P07996 Y_RNA.340-201ENST00000365330 92 ntBASIC2.4□□□□□ -2.03
THBS1P07996 Y_RNA.491-201ENST00000384417 107 ntBASIC2.4□□□□□ -2.03
THBS1P07996 SNORA67.4-201ENST00000384688 142 ntBASIC2.4□□□□□ -2.03
THBS1P07996 MT-TN-201ENST00000387400 73 ntBASIC2.4□□□□□ -2.03
THBS1P07996 AC015818.7-201ENST00000428754 109 ntBASIC2.4□□□□□ -2.03
THBS1P07996 RNU6-634P-201ENST00000459134 106 ntBASIC2.4□□□□□ -2.03
THBS1P07996 RNU6-70P-201ENST00000516438 60 ntBASIC2.4□□□□□ -2.03
THBS1P07996 SNORA31.17-201ENST00000516953 127 ntBASIC2.4□□□□□ -2.03
THBS1P07996 RNU6-303P-201ENST00000517091 106 ntBASIC2.4□□□□□ -2.03
THBS1P07996 RNU6-1015P-201ENST00000517121 99 ntBASIC2.4□□□□□ -2.03
THBS1P07996 MIR3064-201ENST00000581130 66 ntBASIC2.4□□□□□ -2.03
THBS1P07996 AL049779.4-201ENST00000604500 156 ntBASIC2.4□□□□□ -2.03
THBS1P07996 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
THBS1P07996 RNU6-208P-201ENST00000362431 107 ntBASIC2.39□□□□□ -2.03
THBS1P07996 MIR194-1-201ENST00000384892 85 ntBASIC2.39□□□□□ -2.03
THBS1P07996 RNA5SP292-201ENST00000390974 118 ntBASIC2.39□□□□□ -2.03
THBS1P07996 RNA5SP210-201ENST00000391034 120 ntBASIC2.39□□□□□ -2.03
THBS1P07996 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.39□□□□□ -2.03
THBS1P07996 AC245517.4-201ENST00000448601 281 ntBASIC2.39□□□□□ -2.03
THBS1P07996 SNORD109B-201ENST00000458961 67 ntBASIC2.39□□□□□ -2.03
THBS1P07996 SNORD109A-201ENST00000459128 67 ntBASIC2.39□□□□□ -2.03
THBS1P07996 PRELID3BP2-201ENST00000605362 201 ntBASIC2.39□□□□□ -2.03
THBS1P07996 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
THBS1P07996 RNU6-1165P-201ENST00000410119 107 ntBASIC2.38□□□□□ -2.03
THBS1P07996 MIR2115-201ENST00000516657 100 ntBASIC2.38□□□□□ -2.03
THBS1P07996 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.38□□□□□ -2.03
THBS1P07996 MIR4529-201ENST00000578110 78 ntBASIC2.38□□□□□ -2.03
THBS1P07996 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
THBS1P07996 RNU6-859P-201ENST00000362728 107 ntBASIC2.37□□□□□ -2.03
THBS1P07996 RNU4-58P-201ENST00000363192 141 ntBASIC2.37□□□□□ -2.03
THBS1P07996 RNU6-203P-201ENST00000384038 104 ntBASIC2.37□□□□□ -2.03
THBS1P07996 RNU1-52P-201ENST00000384190 164 ntBASIC2.37□□□□□ -2.03
THBS1P07996 MIR635-201ENST00000384830 98 ntBASIC2.37□□□□□ -2.03
THBS1P07996 MIR516A2-201ENST00000384888 90 ntBASIC2.37□□□□□ -2.03
THBS1P07996 MIR516A1-201ENST00000385033 90 ntBASIC2.37□□□□□ -2.03
THBS1P07996 RNU2-59P-201ENST00000410482 191 ntBASIC2.37□□□□□ -2.03
THBS1P07996 RNA5SP445-201ENST00000515889 115 ntBASIC2.37□□□□□ -2.03
THBS1P07996 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.37□□□□□ -2.03
THBS1P07996 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
THBS1P07996 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
THBS1P07996 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
THBS1P07996 MIR30D-201ENST00000362283 70 ntBASIC2.36□□□□□ -2.03
THBS1P07996 SNORA67.1-201ENST00000364749 141 ntBASIC2.36□□□□□ -2.03
THBS1P07996 RNA5SP259-201ENST00000365541 109 ntBASIC2.36□□□□□ -2.03
THBS1P07996 DEFA7P-201ENST00000382676 285 ntBASIC2.36□□□□□ -2.03
THBS1P07996 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.36□□□□□ -2.03
THBS1P07996 RNU7-10P-201ENST00000607194 63 ntBASIC2.36□□□□□ -2.03
THBS1P07996 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
THBS1P07996 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
THBS1P07996 AC080100.1-201ENST00000624239 5356 ntBASIC2.35□□□□□ -2.03
THBS1P07996 MIR6073-201ENST00000352083 89 ntBASIC2.35□□□□□ -2.03
THBS1P07996 RNU6-649P-201ENST00000384463 107 ntBASIC2.35□□□□□ -2.03
THBS1P07996 MIR520H-201ENST00000385126 88 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms