Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ITGB1P05556 Y_RNA.107-201ENST00000363190 121 ntBASIC1.76□□□□□ -2.13
ITGB1P05556 RNU1-42P-201ENST00000364033 160 ntBASIC1.76□□□□□ -2.13
ITGB1P05556 RNU4-36P-201ENST00000364294 144 ntBASIC1.76□□□□□ -2.13
ITGB1P05556 RNU6-679P-201ENST00000391003 106 ntBASIC1.76□□□□□ -2.13
ITGB1P05556 SCARNA23-201ENST00000516060 130 ntBASIC1.76□□□□□ -2.13
ITGB1P05556 RNU7-43P-201ENST00000516554 64 ntBASIC1.76□□□□□ -2.13
ITGB1P05556 RNU6-762P-201ENST00000517107 102 ntBASIC1.76□□□□□ -2.13
ITGB1P05556 SNORD53B-201ENST00000577887 78 ntBASIC1.76□□□□□ -2.13
ITGB1P05556 MIR4764-201ENST00000580680 88 ntBASIC1.76□□□□□ -2.13
ITGB1P05556 SNORA1.1-201ENST00000364671 133 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 RNU6-60P-201ENST00000364792 103 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 RNA5SP259-201ENST00000365541 109 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 RNU6-1067P-201ENST00000384752 107 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 SNORD77B-201ENST00000391112 67 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 RNU1-98P-201ENST00000458992 160 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 snoU13.16-201ENST00000459350 104 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 AC008834.1-201ENST00000511612 175 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 RNU6-158P-201ENST00000517104 100 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 MIR4694-201ENST00000578534 80 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 MIR8055-201ENST00000610739 97 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 MALAT1.1-201ENST00000618249 95 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 AC008133.2-201ENST00000624540 351 ntBASIC1.75□□□□□ -2.13
ITGB1P05556 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ITGB1P05556 Y_RNA.93-201ENST00000363066 109 ntBASIC1.74□□□□□ -2.13
ITGB1P05556 RNU6-832P-201ENST00000363319 107 ntBASIC1.74□□□□□ -2.13
ITGB1P05556 Y_RNA.327-201ENST00000365201 102 ntBASIC1.74□□□□□ -2.13
ITGB1P05556 Y_RNA.342-201ENST00000365352 113 ntBASIC1.74□□□□□ -2.13
ITGB1P05556 RNU6-342P-201ENST00000384521 104 ntBASIC1.74□□□□□ -2.13
ITGB1P05556 MIR520C-201ENST00000385005 87 ntBASIC1.74□□□□□ -2.13
ITGB1P05556 SNORD41-201ENST00000386967 70 ntBASIC1.74□□□□□ -2.13
ITGB1P05556 RNU6-322P-201ENST00000516010 103 ntBASIC1.74□□□□□ -2.13
ITGB1P05556 RNU6-795P-201ENST00000516323 103 ntBASIC1.74□□□□□ -2.13
ITGB1P05556 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.74□□□□□ -2.13
ITGB1P05556 MIR548Z-201ENST00000584743 97 ntBASIC1.74□□□□□ -2.13
ITGB1P05556 FAM71BP1-201ENST00000604431 523 ntBASIC1.74□□□□□ -2.13
ITGB1P05556 MIR302D-201ENST00000362275 68 ntBASIC1.73□□□□□ -2.13
ITGB1P05556 Y_RNA.220-201ENST00000364244 109 ntBASIC1.73□□□□□ -2.13
ITGB1P05556 RNU6-392P-201ENST00000364926 101 ntBASIC1.73□□□□□ -2.13
ITGB1P05556 AL451046.2-201ENST00000403074 277 ntBASIC1.73□□□□□ -2.13
ITGB1P05556 Y_RNA.601-201ENST00000410500 113 ntBASIC1.73□□□□□ -2.13
ITGB1P05556 AC245047.7-201ENST00000440265 293 ntBASIC1.73□□□□□ -2.13
ITGB1P05556 AC009474.2-201ENST00000451383 136 ntBASIC1.73□□□□□ -2.13
ITGB1P05556 RNA5SP445-201ENST00000515889 115 ntBASIC1.73□□□□□ -2.13
ITGB1P05556 RNU6-521P-201ENST00000516663 105 ntBASIC1.73□□□□□ -2.13
ITGB1P05556 AL442128.1-201ENST00000615151 90 ntBASIC1.73□□□□□ -2.13
ITGB1P05556 AC012531.4-201ENST00000616509 177 ntBASIC1.73□□□□□ -2.13
ITGB1P05556 MIR2052-201ENST00000636055 55 ntBASIC1.73□□□□□ -2.13
ITGB1P05556 Y_RNA.466-201ENST00000384294 113 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 Y_RNA.558-201ENST00000384685 113 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 MIR518E-201ENST00000385252 88 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 MIR1323-201ENST00000408090 73 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 MIR1302-4-201ENST00000408701 150 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 AC090844.1-201ENST00000422019 156 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 AC245517.4-201ENST00000448601 281 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 RNU7-41P-201ENST00000515917 61 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 RNU6-844P-201ENST00000517175 102 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 MIR548AO-201ENST00000579992 96 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 MIR8065-201ENST00000620577 100 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 AC091304.10-201ENST00000641554 121 ntBASIC1.72□□□□□ -2.13
ITGB1P05556 Y_RNA.388-201ENST00000383919 113 ntBASIC1.71□□□□□ -2.14
ITGB1P05556 SNORA18-201ENST00000384416 132 ntBASIC1.71□□□□□ -2.14
ITGB1P05556 MIR489-201ENST00000384923 84 ntBASIC1.71□□□□□ -2.14
ITGB1P05556 MIR934-201ENST00000401241 83 ntBASIC1.71□□□□□ -2.14
ITGB1P05556 RNY4P29-201ENST00000410801 97 ntBASIC1.71□□□□□ -2.14
ITGB1P05556 RNU6-602P-201ENST00000411155 105 ntBASIC1.71□□□□□ -2.14
ITGB1P05556 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.71□□□□□ -2.14
ITGB1P05556 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.71□□□□□ -2.14
ITGB1P05556 AC005908.1-201ENST00000468701 347 ntBASIC1.71□□□□□ -2.14
ITGB1P05556 RNU7-61P-201ENST00000515897 61 ntBASIC1.71□□□□□ -2.14
ITGB1P05556 Z97988.1-201ENST00000637697 135 ntBASIC1.71□□□□□ -2.14
ITGB1P05556 RNU6-170P-201ENST00000362832 104 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 RNU6-1201P-201ENST00000384227 107 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 MIR30A-201ENST00000385092 71 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 RNU6-1307P-201ENST00000391012 103 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 RNU6-644P-201ENST00000391155 98 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 MIR1276-201ENST00000408707 83 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 RNU6-162P-201ENST00000516228 103 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 SNORD111.1-201ENST00000516421 86 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 RNU6-922P-201ENST00000516753 99 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 SNORA44.1-201ENST00000517031 108 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 AC024614.2-201ENST00000577584 372 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 MIR4251-201ENST00000635819 61 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 AL512310.12-203ENST00000640543 90 ntBASIC1.7□□□□□ -2.14
ITGB1P05556 Y_RNA.10-201ENST00000362371 110 ntBASIC1.69□□□□□ -2.14
ITGB1P05556 Y_RNA.290-201ENST00000364879 114 ntBASIC1.69□□□□□ -2.14
ITGB1P05556 SNORA26.2-201ENST00000390922 122 ntBASIC1.69□□□□□ -2.14
ITGB1P05556 SNORA67.6-201ENST00000391093 99 ntBASIC1.69□□□□□ -2.14
ITGB1P05556 MIR3198-2-201ENST00000577868 80 ntBASIC1.69□□□□□ -2.14
ITGB1P05556 AC062037.1-201ENST00000605302 128 ntBASIC1.69□□□□□ -2.14
ITGB1P05556 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
ITGB1P05556 SNORA7.1-201ENST00000363750 139 ntBASIC1.68□□□□□ -2.14
ITGB1P05556 Y_RNA.224-201ENST00000364308 111 ntBASIC1.68□□□□□ -2.14
ITGB1P05556 AC004941.2-201ENST00000427009 228 ntBASIC1.68□□□□□ -2.14
ITGB1P05556 snoU13.9-201ENST00000458927 103 ntBASIC1.68□□□□□ -2.14
ITGB1P05556 MIR4777-201ENST00000583710 86 ntBASIC1.68□□□□□ -2.14
ITGB1P05556 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
ITGB1P05556 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 227.2 ms