Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MT-TN-201ENST00000387400 73 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 RNU2-40P-201ENST00000410833 196 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 RNA5SP233-201ENST00000459153 113 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 AC005908.1-201ENST00000468701 347 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 RN7SL274P-201ENST00000492268 272 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 RNU6-162P-201ENST00000516228 103 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 SNRPGP19-201ENST00000603826 189 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PDGFAP04085 RNU6-949P-201ENST00000384040 107 ntBASIC2.17□□□□□ -2.06
PDGFAP04085 RNU6-813P-201ENST00000384691 107 ntBASIC2.17□□□□□ -2.06
PDGFAP04085 MIR450A2-201ENST00000385022 100 ntBASIC2.17□□□□□ -2.06
PDGFAP04085 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PDGFAP04085 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.17□□□□□ -2.06
PDGFAP04085 AC109327.2-201ENST00000448339 378 ntBASIC2.17□□□□□ -2.06
PDGFAP04085 RPL30P7-201ENST00000479312 323 ntBASIC2.17□□□□□ -2.06
PDGFAP04085 RNU11-2P-201ENST00000516898 142 ntBASIC2.17□□□□□ -2.06
PDGFAP04085 AP001362.1-201ENST00000625165 124 ntBASIC2.17□□□□□ -2.06
PDGFAP04085 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PDGFAP04085 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PDGFAP04085 AC016717.2-201ENST00000609089 5141 ntBASIC2.16□□□□□ -2.06
PDGFAP04085 SNORD1A-201ENST00000364968 72 ntBASIC2.16□□□□□ -2.06
PDGFAP04085 RNU6-548P-201ENST00000517083 115 ntBASIC2.16□□□□□ -2.06
PDGFAP04085 AC019176.1-201ENST00000518519 225 ntBASIC2.16□□□□□ -2.06
PDGFAP04085 MIR3937-201ENST00000580135 106 ntBASIC2.16□□□□□ -2.06
PDGFAP04085 MIR5092-201ENST00000583139 88 ntBASIC2.16□□□□□ -2.06
PDGFAP04085 AC080100.1-201ENST00000624239 5356 ntBASIC2.16□□□□□ -2.06
PDGFAP04085 MIR103A2-201ENST00000362154 78 ntBASIC2.15□□□□□ -2.07
PDGFAP04085 SNORA67.3-201ENST00000384366 140 ntBASIC2.15□□□□□ -2.07
PDGFAP04085 MIR548G-201ENST00000408442 89 ntBASIC2.15□□□□□ -2.07
PDGFAP04085 BTF3P4-201ENST00000418852 495 ntBASIC2.15□□□□□ -2.07
PDGFAP04085 HMGN2P38-201ENST00000423806 265 ntBASIC2.15□□□□□ -2.07
PDGFAP04085 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
PDGFAP04085 AC090255.1-201ENST00000495779 349 ntBASIC2.15□□□□□ -2.07
PDGFAP04085 RNU6-90P-201ENST00000606352 106 ntBASIC2.15□□□□□ -2.07
PDGFAP04085 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PDGFAP04085 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PDGFAP04085 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
PDGFAP04085 SNORA64-201ENST00000384674 134 ntBASIC2.14□□□□□ -2.07
PDGFAP04085 MIR563-201ENST00000385080 79 ntBASIC2.14□□□□□ -2.07
PDGFAP04085 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.14□□□□□ -2.07
PDGFAP04085 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
PDGFAP04085 snoU13.25-201ENST00000458945 104 ntBASIC2.14□□□□□ -2.07
PDGFAP04085 MIR3198-2-201ENST00000577868 80 ntBASIC2.14□□□□□ -2.07
PDGFAP04085 MIR6873-201ENST00000622788 63 ntBASIC2.14□□□□□ -2.07
PDGFAP04085 AL359851.1-201ENST00000569460 4997 ntBASIC2.14□□□□□ -2.07
PDGFAP04085 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PDGFAP04085 MIRLET7G-201ENST00000362280 84 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 RNA5SP264-201ENST00000363115 107 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 RNU6-1163P-201ENST00000364516 107 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 RNU6-820P-201ENST00000384273 107 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 U8.15-201ENST00000390947 134 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 HMGN2P19-201ENST00000425149 265 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 SPINT5P-201ENST00000448174 155 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 RNU7-62P-201ENST00000458856 62 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 AP003716.2-201ENST00000528260 108 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 SNORA4-201ENST00000584302 138 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 RNU6-86P-201ENST00000606534 107 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 MIR6740-201ENST00000618268 113 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 AP000553.5-201ENST00000641933 54 ntBASIC2.13□□□□□ -2.07
PDGFAP04085 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.12□□□□□ -2.07
PDGFAP04085 SNORD116-10-201ENST00000363791 102 ntBASIC2.12□□□□□ -2.07
PDGFAP04085 RNA5SP138-201ENST00000365098 114 ntBASIC2.12□□□□□ -2.07
PDGFAP04085 RNU6-205P-201ENST00000390858 107 ntBASIC2.12□□□□□ -2.07
PDGFAP04085 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.12□□□□□ -2.07
PDGFAP04085 MTND5P40-201ENST00000559945 246 ntBASIC2.12□□□□□ -2.07
PDGFAP04085 AC062037.1-201ENST00000605302 128 ntBASIC2.12□□□□□ -2.07
PDGFAP04085 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.12□□□□□ -2.07
PDGFAP04085 MIR377-201ENST00000362145 69 ntBASIC2.11□□□□□ -2.07
PDGFAP04085 RNY1P2-201ENST00000364820 117 ntBASIC2.11□□□□□ -2.07
PDGFAP04085 Y_RNA.567-201ENST00000384736 106 ntBASIC2.11□□□□□ -2.07
PDGFAP04085 MIR1185-1-201ENST00000408598 86 ntBASIC2.11□□□□□ -2.07
PDGFAP04085 RNU6-1165P-201ENST00000410119 107 ntBASIC2.11□□□□□ -2.07
PDGFAP04085 RNU6-613P-201ENST00000410412 108 ntBASIC2.11□□□□□ -2.07
PDGFAP04085 RPL23AP42-201ENST00000471152 471 ntBASIC2.11□□□□□ -2.07
PDGFAP04085 RN7SKP12-201ENST00000516275 143 ntBASIC2.11□□□□□ -2.07
PDGFAP04085 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.11□□□□□ -2.07
PDGFAP04085 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.11□□□□□ -2.07
PDGFAP04085 MIR6516-201ENST00000630554 81 ntBASIC2.11□□□□□ -2.07
PDGFAP04085 Y_RNA.17-201ENST00000362433 111 ntBASIC2.1□□□□□ -2.07
PDGFAP04085 Y_RNA.388-201ENST00000383919 113 ntBASIC2.1□□□□□ -2.07
PDGFAP04085 MT-TF-201ENST00000387314 71 ntBASIC2.1□□□□□ -2.07
PDGFAP04085 RNA5SP247-201ENST00000411181 105 ntBASIC2.1□□□□□ -2.07
PDGFAP04085 RPS29P11-201ENST00000496507 171 ntBASIC2.1□□□□□ -2.07
PDGFAP04085 MIR3664-201ENST00000579074 99 ntBASIC2.1□□□□□ -2.07
PDGFAP04085 MIR5007-201ENST00000583098 95 ntBASIC2.1□□□□□ -2.07
PDGFAP04085 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PDGFAP04085 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
PDGFAP04085 Y_RNA.168-201ENST00000363740 102 ntBASIC2.09□□□□□ -2.07
PDGFAP04085 SNORD58A-201ENST00000383875 65 ntBASIC2.09□□□□□ -2.07
PDGFAP04085 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.09□□□□□ -2.07
PDGFAP04085 AC103810.7-201ENST00000607821 91 ntBASIC2.09□□□□□ -2.07
PDGFAP04085 SEPT14P17-201ENST00000617978 177 ntBASIC2.09□□□□□ -2.07
PDGFAP04085 AL353997.5-201ENST00000618886 171 ntBASIC2.09□□□□□ -2.07
PDGFAP04085 AC012676.2-201ENST00000619258 186 ntBASIC2.09□□□□□ -2.07
PDGFAP04085 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PDGFAP04085 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.08
PDGFAP04085 MIR30D-201ENST00000362283 70 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms