Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU6-1110P-201ENST00000516462 101 ntBASIC0.74□□□□□ -2.29
VTNP04004 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.74□□□□□ -2.29
VTNP04004 Y_RNA.778-201ENST00000620203 90 ntBASIC0.74□□□□□ -2.29
VTNP04004 RNU6-349P-201ENST00000362402 107 ntBASIC0.73□□□□□ -2.29
VTNP04004 RNU6-508P-201ENST00000363231 103 ntBASIC0.73□□□□□ -2.29
VTNP04004 Y_RNA.171-201ENST00000363760 102 ntBASIC0.73□□□□□ -2.29
VTNP04004 Y_RNA.398-201ENST00000383952 99 ntBASIC0.73□□□□□ -2.29
VTNP04004 Y_RNA.430-201ENST00000384081 110 ntBASIC0.73□□□□□ -2.29
VTNP04004 RNU6-342P-201ENST00000384521 104 ntBASIC0.73□□□□□ -2.29
VTNP04004 MIR513C-201ENST00000401352 84 ntBASIC0.73□□□□□ -2.29
VTNP04004 SNORD99-201ENST00000408612 74 ntBASIC0.73□□□□□ -2.29
VTNP04004 RNU6-893P-201ENST00000458841 100 ntBASIC0.73□□□□□ -2.29
VTNP04004 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
VTNP04004 RNU6-240P-201ENST00000516098 97 ntBASIC0.73□□□□□ -2.29
VTNP04004 RNA5SP236-201ENST00000516169 116 ntBASIC0.73□□□□□ -2.29
VTNP04004 SNORA25.12-201ENST00000516202 82 ntBASIC0.73□□□□□ -2.29
VTNP04004 Y_RNA.686-201ENST00000516548 134 ntBASIC0.73□□□□□ -2.29
VTNP04004 Y_RNA.690-201ENST00000516603 95 ntBASIC0.73□□□□□ -2.29
VTNP04004 MIR3144-201ENST00000579460 79 ntBASIC0.73□□□□□ -2.29
VTNP04004 AC025627.3-201ENST00000582078 182 ntBASIC0.73□□□□□ -2.29
VTNP04004 MIR3668-201ENST00000582138 75 ntBASIC0.73□□□□□ -2.29
VTNP04004 AC020891.4-201ENST00000605745 93 ntBASIC0.73□□□□□ -2.29
VTNP04004 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
VTNP04004 RNU6-309P-201ENST00000364573 106 ntBASIC0.72□□□□□ -2.29
VTNP04004 Y_RNA.466-201ENST00000384294 113 ntBASIC0.72□□□□□ -2.29
VTNP04004 SNORA18-201ENST00000384416 132 ntBASIC0.72□□□□□ -2.29
VTNP04004 SNORD105-201ENST00000386910 85 ntBASIC0.72□□□□□ -2.29
VTNP04004 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.72□□□□□ -2.29
VTNP04004 RNU6-394P-201ENST00000410735 107 ntBASIC0.72□□□□□ -2.29
VTNP04004 AL022718.1-201ENST00000412004 84 ntBASIC0.72□□□□□ -2.29
VTNP04004 MIR18B-201ENST00000454574 71 ntBASIC0.72□□□□□ -2.29
VTNP04004 RNA5SP480-201ENST00000516840 109 ntBASIC0.72□□□□□ -2.29
VTNP04004 MIR4676-201ENST00000583078 72 ntBASIC0.72□□□□□ -2.29
VTNP04004 AC098479.1-201ENST00000609225 154 ntBASIC0.72□□□□□ -2.29
VTNP04004 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
VTNP04004 RNU6-460P-201ENST00000391158 108 ntBASIC0.71□□□□□ -2.3
VTNP04004 MIR1257-201ENST00000408490 117 ntBASIC0.71□□□□□ -2.3
VTNP04004 SNORD93-201ENST00000408813 74 ntBASIC0.71□□□□□ -2.3
VTNP04004 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.71□□□□□ -2.3
VTNP04004 RNU7-113P-201ENST00000459273 62 ntBASIC0.71□□□□□ -2.3
VTNP04004 RNU6-1258P-201ENST00000516911 111 ntBASIC0.71□□□□□ -2.3
VTNP04004 RNU2-60P-201ENST00000517290 128 ntBASIC0.71□□□□□ -2.3
VTNP04004 AC133485.4-201ENST00000561835 220 ntBASIC0.71□□□□□ -2.3
VTNP04004 AC138907.4-201ENST00000570107 226 ntBASIC0.71□□□□□ -2.3
VTNP04004 AC011195.1-201ENST00000578177 177 ntBASIC0.71□□□□□ -2.3
VTNP04004 Y_RNA.757-201ENST00000578934 114 ntBASIC0.71□□□□□ -2.3
VTNP04004 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
VTNP04004 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
VTNP04004 RNU6-364P-201ENST00000384387 107 ntBASIC0.7□□□□□ -2.3
VTNP04004 MIR520H-201ENST00000385126 88 ntBASIC0.7□□□□□ -2.3
VTNP04004 Y_RNA.580-201ENST00000391004 95 ntBASIC0.7□□□□□ -2.3
VTNP04004 PCNPP3-201ENST00000393579 471 ntBASIC0.7□□□□□ -2.3
VTNP04004 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
VTNP04004 RNA5SP144-201ENST00000410846 116 ntBASIC0.7□□□□□ -2.3
VTNP04004 RNU7-185P-201ENST00000459215 60 ntBASIC0.7□□□□□ -2.3
VTNP04004 RNA5SP33-201ENST00000516687 98 ntBASIC0.7□□□□□ -2.3
VTNP04004 MIR4305-201ENST00000583252 102 ntBASIC0.7□□□□□ -2.3
VTNP04004 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
VTNP04004 MIR6513-201ENST00000621188 64 ntBASIC0.7□□□□□ -2.3
VTNP04004 AC021753.1-201ENST00000635724 168 ntBASIC0.7□□□□□ -2.3
VTNP04004 MIR6841-201ENST00000637129 72 ntBASIC0.7□□□□□ -2.3
VTNP04004 AL589743.1-201ENST00000551932 2712 ntBASIC0.7□□□□□ -2.3
VTNP04004 MIR30D-201ENST00000362283 70 ntBASIC0.69□□□□□ -2.3
VTNP04004 RNU6-369P-201ENST00000362515 102 ntBASIC0.69□□□□□ -2.3
VTNP04004 Y_RNA.120-201ENST00000363304 110 ntBASIC0.69□□□□□ -2.3
VTNP04004 Y_RNA.251-201ENST00000364551 99 ntBASIC0.69□□□□□ -2.3
VTNP04004 SNORA32-201ENST00000384072 121 ntBASIC0.69□□□□□ -2.3
VTNP04004 MIR938-201ENST00000401216 83 ntBASIC0.69□□□□□ -2.3
VTNP04004 AL512326.2-201ENST00000426359 151 ntBASIC0.69□□□□□ -2.3
VTNP04004 MTND5P41-201ENST00000517498 206 ntBASIC0.69□□□□□ -2.3
VTNP04004 AC141846.1-201ENST00000568348 142 ntBASIC0.69□□□□□ -2.3
VTNP04004 MIR4804-201ENST00000581683 73 ntBASIC0.69□□□□□ -2.3
VTNP04004 AC021443.1-201ENST00000604478 211 ntBASIC0.69□□□□□ -2.3
VTNP04004 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.69□□□□□ -2.3
VTNP04004 AL662814.1-201ENST00000617364 121 ntBASIC0.69□□□□□ -2.3
VTNP04004 Y_RNA.470-201ENST00000384307 117 ntBASIC0.68□□□□□ -2.3
VTNP04004 MIR563-201ENST00000385080 79 ntBASIC0.68□□□□□ -2.3
VTNP04004 MT-TF-201ENST00000387314 71 ntBASIC0.68□□□□□ -2.3
VTNP04004 RNU1-119P-201ENST00000391122 165 ntBASIC0.68□□□□□ -2.3
VTNP04004 RNU6-1086P-201ENST00000410930 100 ntBASIC0.68□□□□□ -2.3
VTNP04004 RNU7-164P-201ENST00000459221 62 ntBASIC0.68□□□□□ -2.3
VTNP04004 RNU7-156P-201ENST00000517214 74 ntBASIC0.68□□□□□ -2.3
VTNP04004 MIR548X2-201ENST00000579776 100 ntBASIC0.68□□□□□ -2.3
VTNP04004 AC011603.4-201ENST00000611325 277 ntBASIC0.68□□□□□ -2.3
VTNP04004 RNU6-403P-201ENST00000363163 104 ntBASIC0.67□□□□□ -2.3
VTNP04004 RNU6-915P-201ENST00000364943 103 ntBASIC0.67□□□□□ -2.3
VTNP04004 MIR125B2-201ENST00000385128 89 ntBASIC0.67□□□□□ -2.3
VTNP04004 AL603914.1-201ENST00000401964 204 ntBASIC0.67□□□□□ -2.3
VTNP04004 RNU6-447P-201ENST00000410293 104 ntBASIC0.67□□□□□ -2.3
VTNP04004 RNU6-1118P-201ENST00000410382 104 ntBASIC0.67□□□□□ -2.3
VTNP04004 RNU6-1076P-201ENST00000410397 104 ntBASIC0.67□□□□□ -2.3
VTNP04004 RNU6-355P-201ENST00000410427 104 ntBASIC0.67□□□□□ -2.3
VTNP04004 RNU6-791P-201ENST00000410467 104 ntBASIC0.67□□□□□ -2.3
VTNP04004 RNU6-705P-201ENST00000410601 104 ntBASIC0.67□□□□□ -2.3
VTNP04004 RNU6-1100P-201ENST00000410691 104 ntBASIC0.67□□□□□ -2.3
VTNP04004 RNU6-860P-201ENST00000410860 104 ntBASIC0.67□□□□□ -2.3
VTNP04004 RNA5SP222-201ENST00000411039 105 ntBASIC0.67□□□□□ -2.3
VTNP04004 RNU6-1217P-201ENST00000411276 104 ntBASIC0.67□□□□□ -2.3
VTNP04004 RNU6-785P-201ENST00000411324 104 ntBASIC0.67□□□□□ -2.3
VTNP04004 Y_RNA.651-201ENST00000459380 103 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms