Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SPINT5P-201ENST00000448174 155 ntBASIC-1.27□□□□□ -2.61
APOA1P02647 RNU7-74P-201ENST00000459104 62 ntBASIC-1.27□□□□□ -2.61
APOA1P02647 RNU6-559P-201ENST00000516151 98 ntBASIC-1.27□□□□□ -2.61
APOA1P02647 RNU6-881P-201ENST00000516813 102 ntBASIC-1.27□□□□□ -2.61
APOA1P02647 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.27□□□□□ -2.61
APOA1P02647 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 RNY4P3-201ENST00000365254 95 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 RNU6-102P-201ENST00000384485 104 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 RNU6-429P-201ENST00000384582 108 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 MIR204-201ENST00000385200 110 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 AL445193.1-201ENST00000441183 141 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 RNU6-718P-201ENST00000516166 105 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 SNORA40.14-201ENST00000516543 86 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.28□□□□□ -2.61
APOA1P02647 MIR3920-201ENST00000581751 86 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 uc_338.10-201ENST00000621872 182 ntBASIC-1.28□□□□□ -2.61
APOA1P02647 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.29□□□□□ -2.62
APOA1P02647 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.29□□□□□ -2.62
APOA1P02647 MIR9-2-201ENST00000384838 87 ntBASIC-1.29□□□□□ -2.62
APOA1P02647 MIR181B2-201ENST00000385004 89 ntBASIC-1.29□□□□□ -2.62
APOA1P02647 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.29□□□□□ -2.62
APOA1P02647 RNU6-130P-201ENST00000411112 103 ntBASIC-1.29□□□□□ -2.62
APOA1P02647 AC097635.1-201ENST00000450678 155 ntBASIC-1.29□□□□□ -2.62
APOA1P02647 HSPE1P25-201ENST00000455484 251 ntBASIC-1.29□□□□□ -2.62
APOA1P02647 TRAJ51-201ENST00000504127 63 ntBASIC-1.29□□□□□ -2.62
APOA1P02647 RNU7-137P-201ENST00000516788 62 ntBASIC-1.29□□□□□ -2.62
APOA1P02647 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.29□□□□□ -2.62
APOA1P02647 PART1_1.1-201ENST00000611761 217 ntBASIC-1.29□□□□□ -2.62
APOA1P02647 MIR6738-201ENST00000619620 64 ntBASIC-1.29□□□□□ -2.62
APOA1P02647 RNU1-141P-201ENST00000364623 158 ntBASIC-1.3□□□□□ -2.62
APOA1P02647 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.3□□□□□ -2.62
APOA1P02647 RNY3P5-201ENST00000384127 102 ntBASIC-1.3□□□□□ -2.62
APOA1P02647 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.3□□□□□ -2.62
APOA1P02647 RNU6-30P-201ENST00000384561 107 ntBASIC-1.3□□□□□ -2.62
APOA1P02647 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.3□□□□□ -2.62
APOA1P02647 SNORA53-201ENST00000391141 249 ntBASIC-1.3□□□□□ -2.62
APOA1P02647 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.3□□□□□ -2.62
APOA1P02647 SNRPGP8-201ENST00000454064 226 ntBASIC-1.3□□□□□ -2.62
APOA1P02647 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.3□□□□□ -2.62
APOA1P02647 AC069439.1-201ENST00000494739 167 ntBASIC-1.3□□□□□ -2.62
APOA1P02647 RNU7-13P-201ENST00000516413 62 ntBASIC-1.3□□□□□ -2.62
APOA1P02647 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.3□□□□□ -2.62
APOA1P02647 RNU6-845P-201ENST00000362578 103 ntBASIC-1.31□□□□□ -2.62
APOA1P02647 RNU4-90P-201ENST00000362773 141 ntBASIC-1.31□□□□□ -2.62
APOA1P02647 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.31□□□□□ -2.62
APOA1P02647 SNORD67.1-201ENST00000516618 108 ntBASIC-1.31□□□□□ -2.62
APOA1P02647 SNORA20.3-201ENST00000516880 132 ntBASIC-1.31□□□□□ -2.62
APOA1P02647 MIR4324-201ENST00000584846 72 ntBASIC-1.31□□□□□ -2.62
APOA1P02647 AC025253.1-201ENST00000613623 543 ntBASIC-1.31□□□□□ -2.62
APOA1P02647 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.32□□□□□ -2.62
APOA1P02647 RNU4-36P-201ENST00000364294 144 ntBASIC-1.32□□□□□ -2.62
APOA1P02647 SNORD114-29-201ENST00000364819 70 ntBASIC-1.32□□□□□ -2.62
APOA1P02647 SNORA32-201ENST00000384072 121 ntBASIC-1.32□□□□□ -2.62
APOA1P02647 RNU6-662P-201ENST00000384253 104 ntBASIC-1.32□□□□□ -2.62
APOA1P02647 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.32□□□□□ -2.62
APOA1P02647 SNORD56B-201ENST00000384713 71 ntBASIC-1.32□□□□□ -2.62
APOA1P02647 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
APOA1P02647 AL731563.1-201ENST00000442202 214 ntBASIC-1.32□□□□□ -2.62
APOA1P02647 RNU6-358P-201ENST00000516564 75 ntBASIC-1.32□□□□□ -2.62
APOA1P02647 MIR4280-201ENST00000582178 76 ntBASIC-1.32□□□□□ -2.62
APOA1P02647 AL008718.3-201ENST00000610217 321 ntBASIC-1.32□□□□□ -2.62
APOA1P02647 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.33□□□□□ -2.62
APOA1P02647 MIR548F1-201ENST00000408667 84 ntBASIC-1.33□□□□□ -2.62
APOA1P02647 RNU7-113P-201ENST00000459273 62 ntBASIC-1.33□□□□□ -2.62
APOA1P02647 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.33□□□□□ -2.62
APOA1P02647 RNU6-175P-201ENST00000516896 107 ntBASIC-1.33□□□□□ -2.62
APOA1P02647 AC040926.1-201ENST00000530195 238 ntBASIC-1.33□□□□□ -2.62
APOA1P02647 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.33□□□□□ -2.62
APOA1P02647 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.33□□□□□ -2.62
APOA1P02647 MIR376A1-201ENST00000616574 68 ntBASIC-1.33□□□□□ -2.62
APOA1P02647 AL606534.2-204ENST00000635008 178 ntBASIC-1.33□□□□□ -2.62
APOA1P02647 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.34□□□□□ -2.62
APOA1P02647 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.34□□□□□ -2.62
APOA1P02647 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.34□□□□□ -2.62
APOA1P02647 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.34□□□□□ -2.62
APOA1P02647 snoU13.19-201ENST00000459148 104 ntBASIC-1.34□□□□□ -2.62
APOA1P02647 snoU13.11-201ENST00000459219 104 ntBASIC-1.34□□□□□ -2.62
APOA1P02647 AC113139.1-201ENST00000605049 239 ntBASIC-1.34□□□□□ -2.62
APOA1P02647 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 SNORD114-10-201ENST00000363409 72 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 RNU4-24P-201ENST00000364565 139 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 MT-TT-201ENST00000387460 66 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.35□□□□□ -2.63
APOA1P02647 AL603914.1-201ENST00000401964 204 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 RNU6-720P-201ENST00000516363 108 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 RNA5SP33-201ENST00000516687 98 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 RNU6-86P-201ENST00000606534 107 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 AC069503.3-201ENST00000618674 145 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 snoU18.1-201ENST00000629629 71 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 MTND4LP32-201ENST00000636111 270 ntBASIC-1.35□□□□□ -2.63
APOA1P02647 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.36□□□□□ -2.63
APOA1P02647 MTND4LP30-201ENST00000454092 297 ntBASIC-1.36□□□□□ -2.63
APOA1P02647 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.36□□□□□ -2.63
APOA1P02647 SNORD38.3-201ENST00000516599 73 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms