Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
NPM3O75607 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.03□□□□□ -1.76
NPM3O75607 RNU6-940P-201ENST00000363433 104 ntBASIC4.03□□□□□ -1.76
NPM3O75607 IGLVVI-22-1-201ENST00000521183 211 ntBASIC4.03□□□□□ -1.76
NPM3O75607 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NPM3O75607 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPM3O75607 Y_RNA.258-201ENST00000364613 105 ntBASIC4.02□□□□□ -1.77
NPM3O75607 RNU6-287P-201ENST00000516230 98 ntBASIC4.02□□□□□ -1.77
NPM3O75607 AC092634.7-201ENST00000621022 103 ntBASIC4.02□□□□□ -1.77
NPM3O75607 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NPM3O75607 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPM3O75607 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPM3O75607 SNORA25.5-201ENST00000363782 126 ntBASIC4.01□□□□□ -1.77
NPM3O75607 Y_RNA.375-201ENST00000365625 101 ntBASIC4.01□□□□□ -1.77
NPM3O75607 SNORD75.2-201ENST00000408784 58 ntBASIC4.01□□□□□ -1.77
NPM3O75607 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPM3O75607 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NPM3O75607 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPM3O75607 MIR216B-201ENST00000390186 82 ntBASIC4□□□□□ -1.77
NPM3O75607 RNA5SP212-201ENST00000391223 107 ntBASIC4□□□□□ -1.77
NPM3O75607 MIR3920-201ENST00000581751 86 ntBASIC4□□□□□ -1.77
NPM3O75607 AC244205.2-202ENST00000635781 342 ntBASIC4□□□□□ -1.77
NPM3O75607 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPM3O75607 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPM3O75607 RNU6-1079P-201ENST00000362861 110 ntBASIC3.99□□□□□ -1.77
NPM3O75607 U8.2-201ENST00000363156 134 ntBASIC3.99□□□□□ -1.77
NPM3O75607 MIR125B2-201ENST00000385128 89 ntBASIC3.99□□□□□ -1.77
NPM3O75607 RPS27P29-201ENST00000463110 252 ntBASIC3.99□□□□□ -1.77
NPM3O75607 Y_RNA.722-201ENST00000517279 114 ntBASIC3.99□□□□□ -1.77
NPM3O75607 MIR466-201ENST00000580653 84 ntBASIC3.99□□□□□ -1.77
NPM3O75607 MIR4325-201ENST00000583049 90 ntBASIC3.99□□□□□ -1.77
NPM3O75607 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.99□□□□□ -1.77
NPM3O75607 AL035425.3-201ENST00000564206 4996 ntBASIC3.99□□□□□ -1.77
NPM3O75607 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPM3O75607 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NPM3O75607 SNORA48.2-201ENST00000390926 124 ntBASIC3.98□□□□□ -1.77
NPM3O75607 RNU7-24P-201ENST00000458867 62 ntBASIC3.98□□□□□ -1.77
NPM3O75607 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPM3O75607 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPM3O75607 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC3.97□□□□□ -1.77
NPM3O75607 RNU6-934P-201ENST00000365154 107 ntBASIC3.97□□□□□ -1.77
NPM3O75607 RNU1-89P-201ENST00000384592 164 ntBASIC3.97□□□□□ -1.77
NPM3O75607 RNU6-535P-201ENST00000384722 107 ntBASIC3.97□□□□□ -1.77
NPM3O75607 RNA5SP492-201ENST00000411330 114 ntBASIC3.97□□□□□ -1.77
NPM3O75607 SNORD83.1-201ENST00000411362 77 ntBASIC3.97□□□□□ -1.77
NPM3O75607 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPM3O75607 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.96□□□□□ -1.77
NPM3O75607 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPM3O75607 RNU6-808P-201ENST00000391233 108 ntBASIC3.96□□□□□ -1.78
NPM3O75607 S100A11P2-201ENST00000467589 312 ntBASIC3.96□□□□□ -1.78
NPM3O75607 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
NPM3O75607 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.95□□□□□ -1.78
NPM3O75607 RNA5SP374-201ENST00000362939 125 ntBASIC3.95□□□□□ -1.78
NPM3O75607 SNORA31.11-201ENST00000516528 139 ntBASIC3.95□□□□□ -1.78
NPM3O75607 AC073869.9-201ENST00000641610 120 ntBASIC3.95□□□□□ -1.78
NPM3O75607 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NPM3O75607 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPM3O75607 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPM3O75607 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.94□□□□□ -1.78
NPM3O75607 RNA5SP383-201ENST00000362934 120 ntBASIC3.94□□□□□ -1.78
NPM3O75607 RN7SKP123-201ENST00000410732 291 ntBASIC3.94□□□□□ -1.78
NPM3O75607 RNU7-193P-201ENST00000516723 65 ntBASIC3.94□□□□□ -1.78
NPM3O75607 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.94□□□□□ -1.78
NPM3O75607 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPM3O75607 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPM3O75607 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPM3O75607 RNU6-1039P-201ENST00000383931 107 ntBASIC3.93□□□□□ -1.78
NPM3O75607 RNU6-439P-201ENST00000384188 106 ntBASIC3.93□□□□□ -1.78
NPM3O75607 MIR128-1-201ENST00000384921 82 ntBASIC3.93□□□□□ -1.78
NPM3O75607 snoU13.21-201ENST00000459368 105 ntBASIC3.93□□□□□ -1.78
NPM3O75607 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPM3O75607 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPM3O75607 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.92□□□□□ -1.78
NPM3O75607 SNORA3A-201ENST00000364113 130 ntBASIC3.92□□□□□ -1.78
NPM3O75607 AC244505.6-201ENST00000452829 130 ntBASIC3.92□□□□□ -1.78
NPM3O75607 MIR3664-201ENST00000579074 99 ntBASIC3.92□□□□□ -1.78
NPM3O75607 MIR4738-201ENST00000579134 87 ntBASIC3.92□□□□□ -1.78
NPM3O75607 MIR6509-201ENST00000614603 85 ntBASIC3.92□□□□□ -1.78
NPM3O75607 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPM3O75607 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPM3O75607 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPM3O75607 RNU1-52P-201ENST00000384190 164 ntBASIC3.91□□□□□ -1.78
NPM3O75607 MIR634-201ENST00000385208 97 ntBASIC3.91□□□□□ -1.78
NPM3O75607 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPM3O75607 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.91□□□□□ -1.78
NPM3O75607 AC008608.1-201ENST00000603910 127 ntBASIC3.91□□□□□ -1.78
NPM3O75607 AL137790.1-201ENST00000634283 177 ntBASIC3.91□□□□□ -1.78
NPM3O75607 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPM3O75607 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPM3O75607 RNA5SP192-201ENST00000364404 120 ntBASIC3.9□□□□□ -1.79
NPM3O75607 SNORD113.3-201ENST00000364630 78 ntBASIC3.9□□□□□ -1.79
NPM3O75607 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.9□□□□□ -1.79
NPM3O75607 SCARNA13-201ENST00000516672 275 ntBASIC3.9□□□□□ -1.79
NPM3O75607 MIR3186-201ENST00000577404 85 ntBASIC3.9□□□□□ -1.79
NPM3O75607 MIR4771-2-201ENST00000577758 74 ntBASIC3.9□□□□□ -1.79
NPM3O75607 SNORA77B-201ENST00000578179 125 ntBASIC3.9□□□□□ -1.79
NPM3O75607 MIR4771-1-201ENST00000582617 74 ntBASIC3.9□□□□□ -1.79
NPM3O75607 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.9□□□□□ -1.79
NPM3O75607 AL645939.4-201ENST00000604495 135 ntBASIC3.9□□□□□ -1.79
NPM3O75607 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 288.4 ms