Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 RNU6-887P-201ENST00000410660 100 ntBASIC2.34□□□□□ -2.03
GRIN3BO60391 Y_RNA.611-201ENST00000410682 108 ntBASIC2.34□□□□□ -2.03
GRIN3BO60391 RNU7-53P-201ENST00000516705 60 ntBASIC2.34□□□□□ -2.03
GRIN3BO60391 RNU6-1258P-201ENST00000516911 111 ntBASIC2.34□□□□□ -2.03
GRIN3BO60391 MIR8081-201ENST00000611533 95 ntBASIC2.34□□□□□ -2.03
GRIN3BO60391 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.34□□□□□ -2.03
GRIN3BO60391 RNU6-509P-201ENST00000363519 107 ntBASIC2.33□□□□□ -2.04
GRIN3BO60391 Y_RNA.507-201ENST00000384500 99 ntBASIC2.33□□□□□ -2.04
GRIN3BO60391 RNU2-40P-201ENST00000410833 196 ntBASIC2.33□□□□□ -2.04
GRIN3BO60391 AL161935.2-201ENST00000414627 60 ntBASIC2.33□□□□□ -2.04
GRIN3BO60391 AC003989.2-201ENST00000440224 169 ntBASIC2.33□□□□□ -2.04
GRIN3BO60391 RPS29P29-201ENST00000456396 171 ntBASIC2.33□□□□□ -2.04
GRIN3BO60391 AC004812.1-201ENST00000540773 146 ntBASIC2.33□□□□□ -2.04
GRIN3BO60391 MIR548AR-201ENST00000582191 57 ntBASIC2.33□□□□□ -2.04
GRIN3BO60391 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.33□□□□□ -2.04
GRIN3BO60391 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
GRIN3BO60391 AC021613.1-201ENST00000623880 111 ntBASIC2.33□□□□□ -2.04
GRIN3BO60391 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
GRIN3BO60391 SNORD115-27-201ENST00000364430 82 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 RNU6-203P-201ENST00000384038 104 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 RNU6-409P-201ENST00000384114 104 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 Y_RNA.565-201ENST00000384719 101 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 POLR2J4-204ENST00000418424 324 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 AC009474.2-201ENST00000451383 136 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 Y_RNA.705-201ENST00000516862 110 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 RNU6-1006P-201ENST00000516998 103 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 SNORA74.3-201ENST00000517108 154 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 MIR5089-201ENST00000580047 84 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 MIR4712-201ENST00000583750 82 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 MIR502-201ENST00000606349 86 ntBASIC2.32□□□□□ -2.04
GRIN3BO60391 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
GRIN3BO60391 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
GRIN3BO60391 Y_RNA.247-201ENST00000364500 92 ntBASIC2.31□□□□□ -2.04
GRIN3BO60391 Y_RNA.374-201ENST00000365606 101 ntBASIC2.31□□□□□ -2.04
GRIN3BO60391 Y_RNA.537-201ENST00000384626 109 ntBASIC2.31□□□□□ -2.04
GRIN3BO60391 RNU6-1067P-201ENST00000384752 107 ntBASIC2.31□□□□□ -2.04
GRIN3BO60391 MIR9-3-201ENST00000385084 90 ntBASIC2.31□□□□□ -2.04
GRIN3BO60391 SNORD28B-201ENST00000390993 75 ntBASIC2.31□□□□□ -2.04
GRIN3BO60391 SNORA7.5-201ENST00000410672 110 ntBASIC2.31□□□□□ -2.04
GRIN3BO60391 RNU7-73P-201ENST00000458743 63 ntBASIC2.31□□□□□ -2.04
GRIN3BO60391 RNU1-123P-201ENST00000458950 160 ntBASIC2.31□□□□□ -2.04
GRIN3BO60391 FAM106DP-201ENST00000586416 501 ntBASIC2.31□□□□□ -2.04
GRIN3BO60391 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.31□□□□□ -2.04
GRIN3BO60391 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
GRIN3BO60391 SNORD45B-201ENST00000364617 72 ntBASIC2.3□□□□□ -2.04
GRIN3BO60391 SNORD58A-201ENST00000383875 65 ntBASIC2.3□□□□□ -2.04
GRIN3BO60391 RNU6-1319P-201ENST00000390855 104 ntBASIC2.3□□□□□ -2.04
GRIN3BO60391 RNU6-747P-201ENST00000390928 104 ntBASIC2.3□□□□□ -2.04
GRIN3BO60391 U8.15-201ENST00000390947 134 ntBASIC2.3□□□□□ -2.04
GRIN3BO60391 RNU6-241P-201ENST00000391148 104 ntBASIC2.3□□□□□ -2.04
GRIN3BO60391 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.3□□□□□ -2.04
GRIN3BO60391 RNU6-177P-201ENST00000411257 104 ntBASIC2.3□□□□□ -2.04
GRIN3BO60391 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.3□□□□□ -2.04
GRIN3BO60391 RNU6-523P-201ENST00000516304 54 ntBASIC2.3□□□□□ -2.04
GRIN3BO60391 RNU7-43P-201ENST00000516554 64 ntBASIC2.3□□□□□ -2.04
GRIN3BO60391 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.3□□□□□ -2.04
GRIN3BO60391 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.3□□□□□ -2.04
GRIN3BO60391 RNU6-633P-201ENST00000362612 103 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 Y_RNA.171-201ENST00000363760 102 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 RNU6-616P-201ENST00000384353 107 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 SNORA18-201ENST00000384416 132 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 MIR653-201ENST00000385279 96 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 RNA5SP261-201ENST00000410536 106 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 Y_RNA.607-201ENST00000410597 98 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 JTBP1-201ENST00000441314 247 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 RNU7-67P-201ENST00000459003 62 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 AC004223.1-201ENST00000479840 271 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 RNU6-917P-201ENST00000516294 104 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 RNA5SP102-201ENST00000516865 106 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.29□□□□□ -2.04
GRIN3BO60391 SEPT14P17-201ENST00000617978 177 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 AC243994.1-201ENST00000618627 109 ntBASIC2.29□□□□□ -2.04
GRIN3BO60391 RNA5SP276-201ENST00000362580 94 ntBASIC2.28□□□□□ -2.04
GRIN3BO60391 SNORA16B-201ENST00000364674 135 ntBASIC2.28□□□□□ -2.04
GRIN3BO60391 MIR144-201ENST00000384886 86 ntBASIC2.28□□□□□ -2.04
GRIN3BO60391 RNU4-69P-201ENST00000410677 143 ntBASIC2.28□□□□□ -2.04
GRIN3BO60391 AL022718.1-201ENST00000412004 84 ntBASIC2.28□□□□□ -2.04
GRIN3BO60391 AC244636.1-201ENST00000421152 228 ntBASIC2.28□□□□□ -2.04
GRIN3BO60391 RPL23AP6-201ENST00000446637 472 ntBASIC2.28□□□□□ -2.04
GRIN3BO60391 RNU6-958P-201ENST00000516995 106 ntBASIC2.28□□□□□ -2.04
GRIN3BO60391 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.28□□□□□ -2.04
GRIN3BO60391 MIR3152-201ENST00000579801 74 ntBASIC2.28□□□□□ -2.04
GRIN3BO60391 MIR4791-201ENST00000607666 84 ntBASIC2.28□□□□□ -2.04
GRIN3BO60391 AL773524.1-201ENST00000614065 229 ntBASIC2.28□□□□□ -2.04
GRIN3BO60391 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
GRIN3BO60391 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
GRIN3BO60391 Y_RNA.36-201ENST00000362602 112 ntBASIC2.27□□□□□ -2.05
GRIN3BO60391 SNORD116-10-201ENST00000363791 102 ntBASIC2.27□□□□□ -2.05
GRIN3BO60391 Y_RNA.430-201ENST00000384081 110 ntBASIC2.27□□□□□ -2.05
GRIN3BO60391 Y_RNA.470-201ENST00000384307 117 ntBASIC2.27□□□□□ -2.05
GRIN3BO60391 MIR17-201ENST00000385012 84 ntBASIC2.27□□□□□ -2.05
GRIN3BO60391 UBL5P1-201ENST00000507979 193 ntBASIC2.27□□□□□ -2.05
GRIN3BO60391 MIR376B-201ENST00000614515 100 ntBASIC2.27□□□□□ -2.05
GRIN3BO60391 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.27□□□□□ -2.05
GRIN3BO60391 MIR6841-201ENST00000637129 72 ntBASIC2.27□□□□□ -2.05
GRIN3BO60391 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
GRIN3BO60391 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
GRIN3BO60391 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
GRIN3BO60391 MIRLET7G-201ENST00000362280 84 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms