Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNU6-1014P-201ENST00000383940 103 ntBASIC1.5□□□□□ -2.17
PROM1O43490 RNU6-147P-201ENST00000383983 107 ntBASIC1.5□□□□□ -2.17
PROM1O43490 SNORA18-201ENST00000384416 132 ntBASIC1.5□□□□□ -2.17
PROM1O43490 RNU6-342P-201ENST00000384521 104 ntBASIC1.5□□□□□ -2.17
PROM1O43490 RNU6-816P-201ENST00000390914 107 ntBASIC1.5□□□□□ -2.17
PROM1O43490 RNU6-1268P-201ENST00000391214 107 ntBASIC1.5□□□□□ -2.17
PROM1O43490 RNU6-1239P-201ENST00000391310 107 ntBASIC1.5□□□□□ -2.17
PROM1O43490 MIR1302-5-201ENST00000408164 150 ntBASIC1.5□□□□□ -2.17
PROM1O43490 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.5□□□□□ -2.17
PROM1O43490 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.5□□□□□ -2.17
PROM1O43490 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
PROM1O43490 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
PROM1O43490 AL162726.3-218ENST00000636401 95 ntBASIC1.5□□□□□ -2.17
PROM1O43490 Y_RNA.163-201ENST00000363702 113 ntBASIC1.49□□□□□ -2.17
PROM1O43490 RNU6-106P-201ENST00000384405 107 ntBASIC1.49□□□□□ -2.17
PROM1O43490 Y_RNA.507-201ENST00000384500 99 ntBASIC1.49□□□□□ -2.17
PROM1O43490 RNU6-554P-201ENST00000410466 106 ntBASIC1.49□□□□□ -2.17
PROM1O43490 MIR5009-201ENST00000578736 100 ntBASIC1.49□□□□□ -2.17
PROM1O43490 Y_RNA.773-201ENST00000607168 90 ntBASIC1.49□□□□□ -2.17
PROM1O43490 MIR1255B1-201ENST00000636325 63 ntBASIC1.49□□□□□ -2.17
PROM1O43490 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PROM1O43490 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PROM1O43490 Y_RNA.155-201ENST00000363632 101 ntBASIC1.48□□□□□ -2.17
PROM1O43490 Y_RNA.327-201ENST00000365201 102 ntBASIC1.48□□□□□ -2.17
PROM1O43490 RNU6-616P-201ENST00000384353 107 ntBASIC1.48□□□□□ -2.17
PROM1O43490 MIR517C-201ENST00000385103 95 ntBASIC1.48□□□□□ -2.17
PROM1O43490 MIR1912-201ENST00000410389 80 ntBASIC1.48□□□□□ -2.17
PROM1O43490 RNA5SP237-201ENST00000410414 113 ntBASIC1.48□□□□□ -2.17
PROM1O43490 RPL30P7-201ENST00000479312 323 ntBASIC1.48□□□□□ -2.17
PROM1O43490 Y_RNA.323-201ENST00000365157 109 ntBASIC1.47□□□□□ -2.17
PROM1O43490 RNU6-396P-201ENST00000365369 105 ntBASIC1.47□□□□□ -2.17
PROM1O43490 RNU6-756P-201ENST00000383997 107 ntBASIC1.47□□□□□ -2.17
PROM1O43490 SNORA51.5-201ENST00000384126 131 ntBASIC1.47□□□□□ -2.17
PROM1O43490 SNORD26-201ENST00000384147 75 ntBASIC1.47□□□□□ -2.17
PROM1O43490 MIR1323-201ENST00000408090 73 ntBASIC1.47□□□□□ -2.17
PROM1O43490 MIR1276-201ENST00000408707 83 ntBASIC1.47□□□□□ -2.17
PROM1O43490 PRELID3BP2-201ENST00000605362 201 ntBASIC1.47□□□□□ -2.17
PROM1O43490 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PROM1O43490 MIR103A2-201ENST00000362154 78 ntBASIC1.46□□□□□ -2.18
PROM1O43490 SNORD115-19-201ENST00000363098 82 ntBASIC1.46□□□□□ -2.18
PROM1O43490 SNORD115-18-201ENST00000363293 82 ntBASIC1.46□□□□□ -2.18
PROM1O43490 SNORD115-17-201ENST00000364612 82 ntBASIC1.46□□□□□ -2.18
PROM1O43490 RNU6-42P-201ENST00000384165 107 ntBASIC1.46□□□□□ -2.18
PROM1O43490 SNORA7.5-201ENST00000410672 110 ntBASIC1.46□□□□□ -2.18
PROM1O43490 RNU6-1086P-201ENST00000410930 100 ntBASIC1.46□□□□□ -2.18
PROM1O43490 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.46□□□□□ -2.18
PROM1O43490 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.46□□□□□ -2.18
PROM1O43490 MIR1270-201ENST00000459320 83 ntBASIC1.46□□□□□ -2.18
PROM1O43490 AL133373.1-201ENST00000497098 94 ntBASIC1.46□□□□□ -2.18
PROM1O43490 AC141557.1-201ENST00000540982 400 ntBASIC1.46□□□□□ -2.18
PROM1O43490 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
PROM1O43490 MIR3664-201ENST00000579074 99 ntBASIC1.46□□□□□ -2.18
PROM1O43490 MIR3613-201ENST00000579844 87 ntBASIC1.46□□□□□ -2.18
PROM1O43490 FAM71BP1-201ENST00000604431 523 ntBASIC1.46□□□□□ -2.18
PROM1O43490 MIR6504-201ENST00000613520 61 ntBASIC1.46□□□□□ -2.18
PROM1O43490 RNU4-67P-201ENST00000364569 141 ntBASIC1.45□□□□□ -2.18
PROM1O43490 RNU6-392P-201ENST00000364926 101 ntBASIC1.45□□□□□ -2.18
PROM1O43490 RPS27P16-201ENST00000425758 201 ntBASIC1.45□□□□□ -2.18
PROM1O43490 snoU13.25-201ENST00000458945 104 ntBASIC1.45□□□□□ -2.18
PROM1O43490 AL512310.8-201ENST00000550183 120 ntBASIC1.45□□□□□ -2.18
PROM1O43490 SNORA4-201ENST00000584302 138 ntBASIC1.45□□□□□ -2.18
PROM1O43490 AL078603.1-201ENST00000603824 313 ntBASIC1.45□□□□□ -2.18
PROM1O43490 AP000753.3-201ENST00000604083 169 ntBASIC1.45□□□□□ -2.18
PROM1O43490 AL645939.4-201ENST00000604495 135 ntBASIC1.45□□□□□ -2.18
PROM1O43490 RNU6-32P-201ENST00000383948 107 ntBASIC1.44□□□□□ -2.18
PROM1O43490 RNU6-409P-201ENST00000384114 104 ntBASIC1.44□□□□□ -2.18
PROM1O43490 RNU6-13P-201ENST00000384248 107 ntBASIC1.44□□□□□ -2.18
PROM1O43490 RNU6-12P-201ENST00000384604 107 ntBASIC1.44□□□□□ -2.18
PROM1O43490 RNU6-41P-201ENST00000384741 107 ntBASIC1.44□□□□□ -2.18
PROM1O43490 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
PROM1O43490 RNU6-205P-201ENST00000390858 107 ntBASIC1.44□□□□□ -2.18
PROM1O43490 MIR1302-7-201ENST00000408841 72 ntBASIC1.44□□□□□ -2.18
PROM1O43490 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.44□□□□□ -2.18
PROM1O43490 MIR2115-201ENST00000516657 100 ntBASIC1.44□□□□□ -2.18
PROM1O43490 RN7SKP88-201ENST00000516847 250 ntBASIC1.44□□□□□ -2.18
PROM1O43490 RNU6-94P-201ENST00000607728 107 ntBASIC1.44□□□□□ -2.18
PROM1O43490 7SK.8-201ENST00000612110 250 ntBASIC1.44□□□□□ -2.18
PROM1O43490 7SK.11-201ENST00000615477 250 ntBASIC1.44□□□□□ -2.18
PROM1O43490 7SK.13-201ENST00000622040 250 ntBASIC1.44□□□□□ -2.18
PROM1O43490 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
PROM1O43490 RNA5SP264-201ENST00000363115 107 ntBASIC1.43□□□□□ -2.18
PROM1O43490 RNU6-1113P-201ENST00000384348 107 ntBASIC1.43□□□□□ -2.18
PROM1O43490 Y_RNA.495-201ENST00000384435 112 ntBASIC1.43□□□□□ -2.18
PROM1O43490 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
PROM1O43490 RNU6-733P-201ENST00000410759 104 ntBASIC1.43□□□□□ -2.18
PROM1O43490 AC244023.1-201ENST00000426884 112 ntBASIC1.43□□□□□ -2.18
PROM1O43490 RNU7-79P-201ENST00000516082 62 ntBASIC1.43□□□□□ -2.18
PROM1O43490 RNU6-168P-201ENST00000516189 101 ntBASIC1.43□□□□□ -2.18
PROM1O43490 RNA5SP220-201ENST00000516298 104 ntBASIC1.43□□□□□ -2.18
PROM1O43490 RNU6-165P-201ENST00000517170 99 ntBASIC1.43□□□□□ -2.18
PROM1O43490 RNU7-35P-201ENST00000517174 62 ntBASIC1.43□□□□□ -2.18
PROM1O43490 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.43□□□□□ -2.18
PROM1O43490 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
PROM1O43490 AC242498.1-201ENST00000604134 111 ntBASIC1.43□□□□□ -2.18
PROM1O43490 RNU6-766P-201ENST00000362478 107 ntBASIC1.42□□□□□ -2.18
PROM1O43490 RNU6-363P-201ENST00000362895 105 ntBASIC1.42□□□□□ -2.18
PROM1O43490 RNU1-42P-201ENST00000364033 160 ntBASIC1.42□□□□□ -2.18
PROM1O43490 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
PROM1O43490 MIR588-201ENST00000384900 83 ntBASIC1.42□□□□□ -2.18
PROM1O43490 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms